RNA–Protein interactions for RNA: ENST00000404694.3

CGREF1-205, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CGREF1, Length 1,376 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-205ENST00000404694 SARSP49591 514 aaKnown RBP18.37■□□□□ 0.53
CGREF1-205ENST00000404694 TOB1P50616 345 aaPredicted RBP18.37■□□□□ 0.53
CGREF1-205ENST00000404694 POLGP54098 1239 aaPredicted RBP18.37■□□□□ 0.53
CGREF1-205ENST00000404694 CDC42EP1Q00587 391 aa18.37■□□□□ 0.53
CGREF1-205ENST00000404694 SLC39A14Q15043 492 aa18.37■□□□□ 0.53
CGREF1-205ENST00000404694 STK38Q15208 465 aa18.37■□□□□ 0.53
CGREF1-205ENST00000404694 CCDC85BQ15834 202 aaPredicted RBP18.37■□□□□ 0.53
CGREF1-205ENST00000404694 XKR9Q5GH70 373 aa18.37■□□□□ 0.53
CGREF1-205ENST00000404694 RHPN2Q8IUC4 686 aa18.37■□□□□ 0.53
CGREF1-205ENST00000404694 EXOC8Q8IYI6 725 aa18.37■□□□□ 0.53
CGREF1-205ENST00000404694 MICALL1Q8N3F8 863 aa18.37■□□□□ 0.53
CGREF1-205ENST00000404694 FIBCD1Q8N539 461 aa18.37■□□□□ 0.53
CGREF1-205ENST00000404694 FBXO22Q8NEZ5 403 aa18.37■□□□□ 0.53
CGREF1-205ENST00000404694 CHAMP1Q96JM3 812 aa18.37■□□□□ 0.53
CGREF1-205ENST00000404694 C1orf112Q9NSG2 853 aa18.37■□□□□ 0.53
CGREF1-205ENST00000404694 BMP2KQ9NSY1 1161 aaPredicted RBP18.37■□□□□ 0.53
CGREF1-205ENST00000404694 KIAA1671Q9BY89 1806 aa18.37■□□□□ 0.53
CGREF1-205ENST00000404694 A0A087WZ62 844 aa18.36■□□□□ 0.53
CGREF1-205ENST00000404694 C9IYK1 514 aa18.36■□□□□ 0.53
CGREF1-205ENST00000404694 TRAK2O60296 914 aa18.36■□□□□ 0.53
CGREF1-205ENST00000404694 LINC00271P0C7V0 271 aa18.36■□□□□ 0.53
CGREF1-205ENST00000404694 STAG3L1P0CL83 205 aa18.36■□□□□ 0.53
CGREF1-205ENST00000404694 DSC3Q14574 896 aa18.36■□□□□ 0.53
CGREF1-205ENST00000404694 EPC2Q52LR7 807 aa18.36■□□□□ 0.53
CGREF1-205ENST00000404694 SLC24A5Q71RS6 500 aa18.36■□□□□ 0.53
CGREF1-205ENST00000404694 ZNF410Q86VK4 478 aa18.36■□□□□ 0.53
CGREF1-205ENST00000404694 FDXACB1Q9BRP7 624 aaPredicted RBP18.36■□□□□ 0.53
CGREF1-205ENST00000404694 GOLGA6L4A6NEF3 574 aa18.35■□□□□ 0.53
CGREF1-205ENST00000404694 SPTLC2O15270 562 aa18.35■□□□□ 0.53
CGREF1-205ENST00000404694 IBSPP21815 317 aaPredicted RBP18.35■□□□□ 0.53
CGREF1-205ENST00000404694 FGFR4P22455 802 aa18.35■□□□□ 0.53
CGREF1-205ENST00000404694 TECP42680 631 aa18.35■□□□□ 0.53
CGREF1-205ENST00000404694 BTG3Q14201 252 aaPredicted RBP18.35■□□□□ 0.53
CGREF1-205ENST00000404694 EMC2Q15006 297 aa18.35■□□□□ 0.53
CGREF1-205ENST00000404694 SF3A1Q15459 793 aaKnown RBP18.35■□□□□ 0.53
CGREF1-205ENST00000404694 KSR1Q8IVT5 923 aa18.35■□□□□ 0.53
CGREF1-205ENST00000404694 TMEM192Q8IY95 271 aa18.35■□□□□ 0.53
CGREF1-205ENST00000404694 C4orf32Q8N8J7 132 aa18.35■□□□□ 0.53
CGREF1-205ENST00000404694 NLRP4Q96MN2 994 aa18.35■□□□□ 0.53
CGREF1-205ENST00000404694 GCOM2Q9BZD3 368 aaPredicted RBP18.35■□□□□ 0.53
CGREF1-205ENST00000404694 GDPD2Q9HCC8 539 aa18.35■□□□□ 0.53
CGREF1-205ENST00000404694 ANKEF1Q9NU02 776 aa18.35■□□□□ 0.53
CGREF1-205ENST00000404694 LRFN2Q9ULH4 789 aa18.35■□□□□ 0.53
CGREF1-205ENST00000404694 PCDHB6Q9Y5E3 794 aa18.35■□□□□ 0.53
CGREF1-205ENST00000404694 COL4A3BPQ9Y5P4 624 aa18.35■□□□□ 0.53
CGREF1-205ENST00000404694 CLIC4Q9Y696 253 aa18.35■□□□□ 0.53
CGREF1-205ENST00000404694 FNDC1Q4ZHG4 1894 aaPredicted RBP18.35■□□□□ 0.53
CGREF1-205ENST00000404694 GAS2O43903 313 aaKnown RBP18.34■□□□□ 0.53
CGREF1-205ENST00000404694 CSDE1O75534 798 aaKnown RBP18.34■□□□□ 0.53
CGREF1-205ENST00000404694 SPATA31C1P0DKV0 1188 aa18.34■□□□□ 0.53
CGREF1-205ENST00000404694 PTPAQ15257 358 aa18.34■□□□□ 0.53
CGREF1-205ENST00000404694 KLHL40Q2TBA0 621 aa18.34■□□□□ 0.53
CGREF1-205ENST00000404694 CMTR2Q8IYT2 770 aaKnown RBP18.34■□□□□ 0.53
CGREF1-205ENST00000404694 PIGOQ8TEQ8 1089 aa18.34■□□□□ 0.53
CGREF1-205ENST00000404694 PSPC1Q8WXF1 523 aaKnown RBP18.34■□□□□ 0.53
CGREF1-205ENST00000404694 CLP1Q92989 425 aaKnown RBP18.34■□□□□ 0.53
CGREF1-205ENST00000404694 TMEM143Q96AN5 459 aa18.34■□□□□ 0.53
CGREF1-205ENST00000404694 TUFT1Q9NNX1 390 aa18.34■□□□□ 0.53
CGREF1-205ENST00000404694 LMCD1Q9NZU5 365 aa18.34■□□□□ 0.53
CGREF1-205ENST00000404694 PCDHB7Q9Y5E2 793 aa18.34■□□□□ 0.53
CGREF1-205ENST00000404694 SPTBN5Q9NRC6 3674 aaKnown RBP18.34■□□□□ 0.53
CGREF1-205ENST00000404694 LAD1O00515 517 aa18.33■□□□□ 0.53
CGREF1-205ENST00000404694 MED24O75448 989 aa18.33■□□□□ 0.53
CGREF1-205ENST00000404694 ZSCAN20P17040 1043 aaPredicted RBP18.33■□□□□ 0.53
CGREF1-205ENST00000404694 RARRES1P49788 294 aa18.33■□□□□ 0.53
CGREF1-205ENST00000404694 GATMP50440 423 aa18.33■□□□□ 0.53
CGREF1-205ENST00000404694 CEBPZQ03701 1054 aaKnown RBP18.33■□□□□ 0.53
CGREF1-205ENST00000404694 PTGDRQ13258 359 aa18.33■□□□□ 0.53
CGREF1-205ENST00000404694 PAN2Q504Q3 1202 aaKnown RBP18.33■□□□□ 0.53
CGREF1-205ENST00000404694 CATSPER3Q86XQ3 398 aa18.33■□□□□ 0.53
CGREF1-205ENST00000404694 TCP11Q8WWU5 503 aa18.33■□□□□ 0.53
CGREF1-205ENST00000404694 PRPF31Q8WWY3 499 aaKnown RBP18.33■□□□□ 0.53
CGREF1-205ENST00000404694 MTRQ99707 1265 aa18.33■□□□□ 0.53
CGREF1-205ENST00000404694 XPNPEP1Q9NQW7 623 aa18.33■□□□□ 0.53
CGREF1-205ENST00000404694 PRDM6Q9NQX0 595 aa18.33■□□□□ 0.53
CGREF1-205ENST00000404694 RNF216Q9NWF9 866 aaPredicted RBP18.33■□□□□ 0.53
CGREF1-205ENST00000404694 TMEM161AQ9NX61 479 aa18.33■□□□□ 0.53
CGREF1-205ENST00000404694 C5orf67F2Z3F1 127 aa18.32■□□□□ 0.52
CGREF1-205ENST00000404694 H3BNC9 293 aa18.32■□□□□ 0.52
CGREF1-205ENST00000404694 SFPQP23246 707 aaKnown RBP eCLIP18.32■□□□□ 0.52
CGREF1-205ENST00000404694 CTNNB1P35222 781 aa18.32■□□□□ 0.52
CGREF1-205ENST00000404694 FXR2P51116 673 aaKnown RBP eCLIP18.32■□□□□ 0.52
CGREF1-205ENST00000404694 FAM189BP81408 668 aa18.32■□□□□ 0.52
CGREF1-205ENST00000404694 ADALQ6DHV7 355 aa18.32■□□□□ 0.52
CGREF1-205ENST00000404694 CCDC43Q96MW1 224 aaKnown RBP18.32■□□□□ 0.52
CGREF1-205ENST00000404694 POLR3CQ9BUI4 534 aaPredicted RBP18.32■□□□□ 0.52
CGREF1-205ENST00000404694 INO80BQ9C086 356 aaPredicted RBP18.32■□□□□ 0.52
CGREF1-205ENST00000404694 ELAC1Q9H777 363 aaKnown RBP18.32■□□□□ 0.52
CGREF1-205ENST00000404694 IFT122Q9HBG6 1241 aa18.32■□□□□ 0.52
CGREF1-205ENST00000404694 RWDD3Q9Y3V2 267 aa18.32■□□□□ 0.52
CGREF1-205ENST00000404694 MRPL42Q9Y6G3 142 aaKnown RBP18.32■□□□□ 0.52
CGREF1-205ENST00000404694 ATG2AQ2TAZ0 1938 aa18.31■□□□□ 0.52
CGREF1-205ENST00000404694 A0A087WWV3 80 aa18.31■□□□□ 0.52
CGREF1-205ENST00000404694 A0A1W2PQ27 194 aa18.31■□□□□ 0.52
CGREF1-205ENST00000404694 A0A1W2PQ64 194 aa18.31■□□□□ 0.52
CGREF1-205ENST00000404694 A0A1W2PQD8 194 aa18.31■□□□□ 0.52
CGREF1-205ENST00000404694 DGAT1O75907 488 aa18.31■□□□□ 0.52
CGREF1-205ENST00000404694 RPA1P27694 616 aa18.31■□□□□ 0.52
CGREF1-205ENST00000404694 BMPR1AP36894 532 aa18.31■□□□□ 0.52
CGREF1-205ENST00000404694 ME1P48163 572 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms