RNA–Protein interactions for RNA: ENST00000403683.1

HIST2H3A-201, Transcript of histone cluster 2 H3 family member a, humanhuman

APPRIS P1 BASIC

Gene HIST2H3A, Length 1,656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3A-201ENST00000403683 UPF3AQ9H1J1 476 aaKnown RBP27.75■■■□□ 2.03
HIST2H3A-201ENST00000403683 THAP9Q9H5L6 903 aa27.75■■■□□ 2.03
HIST2H3A-201ENST00000403683 SETD4Q9NVD3 440 aa27.75■■■□□ 2.03
HIST2H3A-201ENST00000403683 DENND3A2RUS2 1198 aa27.74■■■□□ 2.03
HIST2H3A-201ENST00000403683 RRN3P2A6NIE6 340 aa27.74■■■□□ 2.03
HIST2H3A-201ENST00000403683 H0YCG3 227 aa27.74■■■□□ 2.03
HIST2H3A-201ENST00000403683 ZNF18P17022 549 aa27.74■■■□□ 2.03
HIST2H3A-201ENST00000403683 GLRA2P23416 452 aa27.74■■■□□ 2.03
HIST2H3A-201ENST00000403683 TMOD1P28289 359 aa27.74■■■□□ 2.03
HIST2H3A-201ENST00000403683 HOXD13P35453 343 aa27.74■■■□□ 2.03
HIST2H3A-201ENST00000403683 PURAQ00577 322 aaKnown RBP27.74■■■□□ 2.03
HIST2H3A-201ENST00000403683 DRP2Q13474 957 aa27.74■■■□□ 2.03
HIST2H3A-201ENST00000403683 SARM1Q6SZW1 724 aa27.74■■■□□ 2.03
HIST2H3A-201ENST00000403683 PPP4R3CPQ6ZMV5 832 aa27.74■■■□□ 2.03
HIST2H3A-201ENST00000403683 HS2ST1Q7LGA3 356 aa27.74■■■□□ 2.03
HIST2H3A-201ENST00000403683 FAM114A1Q8IWE2 563 aa27.74■■■□□ 2.03
HIST2H3A-201ENST00000403683 NTPCRQ9BSD7 190 aaKnown RBP27.74■■■□□ 2.03
HIST2H3A-201ENST00000403683 TMEM206Q9H813 350 aa27.74■■■□□ 2.03
HIST2H3A-201ENST00000403683 TYW1Q9NV66 732 aaKnown RBP27.74■■■□□ 2.03
HIST2H3A-201ENST00000403683 IGKV6-21A0A0C4DH24 114 aa27.73■■■□□ 2.03
HIST2H3A-201ENST00000403683 PDXKO00764 312 aa27.73■■■□□ 2.03
HIST2H3A-201ENST00000403683 C22orf31O95567 290 aa27.73■■■□□ 2.03
HIST2H3A-201ENST00000403683 SMIM10L2AP0DMW4 78 aa27.73■■■□□ 2.03
HIST2H3A-201ENST00000403683 SMIM10L2BP0DMW5 78 aa27.73■■■□□ 2.03
HIST2H3A-201ENST00000403683 NAMPTP43490 491 aa27.73■■■□□ 2.03
HIST2H3A-201ENST00000403683 CLCN3P51790 818 aa27.73■■■□□ 2.03
HIST2H3A-201ENST00000403683 GTF2BQ00403 316 aa27.73■■■□□ 2.03
HIST2H3A-201ENST00000403683 FKBP3Q00688 224 aaKnown RBP27.73■■■□□ 2.03
HIST2H3A-201ENST00000403683 MXD4Q14582 209 aaPredicted RBP27.73■■■□□ 2.03
HIST2H3A-201ENST00000403683 RHPN2Q8IUC4 686 aa27.73■■■□□ 2.03
HIST2H3A-201ENST00000403683 TMEM161BQ8NDZ6 487 aa27.73■■■□□ 2.03
HIST2H3A-201ENST00000403683 PPP1R13LQ8WUF5 828 aa27.73■■■□□ 2.03
HIST2H3A-201ENST00000403683 MTG1Q9BT17 334 aaPredicted RBP27.73■■■□□ 2.03
HIST2H3A-201ENST00000403683 ST6GALNAC4Q9H4F1 302 aa27.73■■■□□ 2.03
HIST2H3A-201ENST00000403683 IFNKQ9P0W0 207 aa27.73■■■□□ 2.03
HIST2H3A-201ENST00000403683 KCNJ18B7U540 433 aa27.72■■■□□ 2.03
HIST2H3A-201ENST00000403683 SRGAP2CP0DJJ0 459 aa27.72■■■□□ 2.03
HIST2H3A-201ENST00000403683 SPAG1Q07617 926 aa27.72■■■□□ 2.03
HIST2H3A-201ENST00000403683 KCNJ12Q14500 433 aa27.72■■■□□ 2.03
HIST2H3A-201ENST00000403683 CDKAL1Q5VV42 579 aa27.72■■■□□ 2.03
HIST2H3A-201ENST00000403683 MTHFD1LQ6UB35 978 aa27.72■■■□□ 2.03
HIST2H3A-201ENST00000403683 SH3TC2Q8TF17 1288 aa27.72■■■□□ 2.03
HIST2H3A-201ENST00000403683 GBP3Q9H0R5 595 aa27.72■■■□□ 2.03
HIST2H3A-201ENST00000403683 EXOC7Q9UPT5 735 aa27.72■■■□□ 2.03
HIST2H3A-201ENST00000403683 NRCAMQ92823 1304 aa27.72■■■□□ 2.03
HIST2H3A-201ENST00000403683 PPP1R37O75864 691 aa27.72■■■□□ 2.03
HIST2H3A-201ENST00000403683 UBASH3AP57075 661 aa27.72■■■□□ 2.03
HIST2H3A-201ENST00000403683 LAMTOR4Q0VGL1 99 aa27.72■■■□□ 2.03
HIST2H3A-201ENST00000403683 ZCWPW2Q504Y3 356 aa27.72■■■□□ 2.03
HIST2H3A-201ENST00000403683 CXCL17Q6UXB2 119 aa27.72■■■□□ 2.03
HIST2H3A-201ENST00000403683 C7orf31Q8N865 590 aa27.72■■■□□ 2.03
HIST2H3A-201ENST00000403683 STRA6Q9BX79 667 aa27.72■■■□□ 2.03
HIST2H3A-201ENST00000403683 CEP350Q5VT06 3117 aa27.71■■■□□ 2.03
HIST2H3A-201ENST00000403683 CLIC2O15247 247 aa27.71■■■□□ 2.03
HIST2H3A-201ENST00000403683 MSCO60682 206 aa27.71■■■□□ 2.03
HIST2H3A-201ENST00000403683 ABCD1P33897 745 aa27.71■■■□□ 2.03
HIST2H3A-201ENST00000403683 ZNF75DP51815 510 aa27.71■■■□□ 2.03
HIST2H3A-201ENST00000403683 MKRN4PQ13434 485 aaPredicted RBP27.71■■■□□ 2.03
HIST2H3A-201ENST00000403683 ADAM9Q13443 819 aa27.71■■■□□ 2.03
HIST2H3A-201ENST00000403683 EDRF1Q3B7T1 1238 aa27.71■■■□□ 2.03
HIST2H3A-201ENST00000403683 FOXR2Q6PJQ5 311 aa27.71■■■□□ 2.03
HIST2H3A-201ENST00000403683 RNF180Q86T96 592 aa27.71■■■□□ 2.03
HIST2H3A-201ENST00000403683 TBX20Q9UMR3 447 aa27.71■■■□□ 2.03
HIST2H3A-201ENST00000403683 TRAF3IP3Q9Y228 551 aa27.71■■■□□ 2.03
HIST2H3A-201ENST00000403683 AKT3Q9Y243 479 aa27.71■■■□□ 2.03
HIST2H3A-201ENST00000403683 PTPN22Q9Y2R2 807 aa27.71■■■□□ 2.03
HIST2H3A-201ENST00000403683 CETN3O15182 167 aa27.7■■■□□ 2.02
HIST2H3A-201ENST00000403683 CBFA2T2O43439 604 aa27.7■■■□□ 2.02
HIST2H3A-201ENST00000403683 ADAMTS4O75173 837 aa27.7■■■□□ 2.02
HIST2H3A-201ENST00000403683 RPL13P26373 211 aaKnown RBP27.7■■■□□ 2.02
HIST2H3A-201ENST00000403683 STRN3Q13033 797 aa27.7■■■□□ 2.02
HIST2H3A-201ENST00000403683 TFDP1Q14186 410 aa27.7■■■□□ 2.02
HIST2H3A-201ENST00000403683 TCP11X2Q5H9J9 407 aa27.7■■■□□ 2.02
HIST2H3A-201ENST00000403683 DRC7Q8IY82 874 aa27.7■■■□□ 2.02
HIST2H3A-201ENST00000403683 GOLGA5Q8TBA6 731 aa27.7■■■□□ 2.02
HIST2H3A-201ENST00000403683 LMBR1Q8WVP7 490 aa27.7■■■□□ 2.02
HIST2H3A-201ENST00000403683 HVCN1Q96D96 273 aa27.7■■■□□ 2.02
HIST2H3A-201ENST00000403683 TPM3P06753 285 aa27.69■■■□□ 2.02
HIST2H3A-201ENST00000403683 NR2F2P24468 414 aa27.69■■■□□ 2.02
HIST2H3A-201ENST00000403683 CCDC173Q0VFZ6 552 aa27.69■■■□□ 2.02
HIST2H3A-201ENST00000403683 CAPSQ13938 189 aa27.69■■■□□ 2.02
HIST2H3A-201ENST00000403683 KCNA10Q16322 511 aa27.69■■■□□ 2.02
HIST2H3A-201ENST00000403683 NFRKBQ6P4R8 1299 aa27.69■■■□□ 2.02
HIST2H3A-201ENST00000403683 PCSK9Q8NBP7 692 aaKnown RBP27.69■■■□□ 2.02
HIST2H3A-201ENST00000403683 BICD1Q96G01 975 aa27.69■■■□□ 2.02
HIST2H3A-201ENST00000403683 NLRP4Q96MN2 994 aa27.69■■■□□ 2.02
HIST2H3A-201ENST00000403683 CTAGE1Q96RT6 745 aa27.69■■■□□ 2.02
HIST2H3A-201ENST00000403683 MAP7D2Q96T17 732 aa27.69■■■□□ 2.02
HIST2H3A-201ENST00000403683 XPO4Q9C0E2 1151 aaKnown RBP27.69■■■□□ 2.02
HIST2H3A-201ENST00000403683 IKZF4Q9H2S9 585 aa27.69■■■□□ 2.02
HIST2H3A-201ENST00000403683 CENPFP49454 3210 aa27.69■■■□□ 2.02
HIST2H3A-201ENST00000403683 K7ERI5 159 aa27.68■■■□□ 2.02
HIST2H3A-201ENST00000403683 HAS3O00219 553 aa27.68■■■□□ 2.02
HIST2H3A-201ENST00000403683 ASAP2O43150 1006 aa27.68■■■□□ 2.02
HIST2H3A-201ENST00000403683 MTIF2P46199 727 aaKnown RBP27.68■■■□□ 2.02
HIST2H3A-201ENST00000403683 FILIP1LQ4L180 1135 aa27.68■■■□□ 2.02
HIST2H3A-201ENST00000403683 RNF149Q8NC42 400 aa27.68■■■□□ 2.02
HIST2H3A-201ENST00000403683 VTI1AQ96AJ9 217 aa27.68■■■□□ 2.02
HIST2H3A-201ENST00000403683 CNOT6LQ96LI5 555 aaKnown RBP27.68■■■□□ 2.02
HIST2H3A-201ENST00000403683 ADGRA3Q8IWK6 1321 aa27.68■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms