RNA–Protein interactions for RNA: ENST00000401408.5

CLHC1-201, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLHC1, Length 2,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-201ENST00000401408 MED4Q9NPJ6 270 aa4.33□□□□□ -1.72
CLHC1-201ENST00000401408 PLSCR4Q9NRQ2 329 aa4.33□□□□□ -1.72
CLHC1-201ENST00000401408 UBAP1Q9NZ09 502 aa4.33□□□□□ -1.72
CLHC1-201ENST00000401408 AASSQ9UDR5 926 aa4.33□□□□□ -1.72
CLHC1-201ENST00000401408 HPCAL4Q9UM19 191 aa4.33□□□□□ -1.72
CLHC1-201ENST00000401408 TRAF3IP3Q9Y228 551 aa4.33□□□□□ -1.72
CLHC1-201ENST00000401408 PCDHGB6Q9Y5F9 930 aa4.33□□□□□ -1.72
CLHC1-201ENST00000401408 PCDHGB5Q9Y5G0 923 aa4.33□□□□□ -1.72
CLHC1-201ENST00000401408 PARP3Q9Y6F1 533 aa4.33□□□□□ -1.72
CLHC1-201ENST00000401408 LAMA2P24043 3122 aaKnown RBP4.33□□□□□ -1.72
CLHC1-201ENST00000401408 KDRP35968 1356 aa4.33□□□□□ -1.72
CLHC1-201ENST00000401408 GOLGA6L10A0A0M3HER8 536 aa4.32□□□□□ -1.72
CLHC1-201ENST00000401408 NFKBIEO00221 500 aa4.32□□□□□ -1.72
CLHC1-201ENST00000401408 CPNE3O75131 537 aaKnown RBP4.32□□□□□ -1.72
CLHC1-201ENST00000401408 EOMESO95936 686 aa4.32□□□□□ -1.72
CLHC1-201ENST00000401408 PDGFAP04085 211 aa4.32□□□□□ -1.72
CLHC1-201ENST00000401408 POLBP06746 335 aa4.32□□□□□ -1.72
CLHC1-201ENST00000401408 MYCLP12524 364 aaPredicted RBP4.32□□□□□ -1.72
CLHC1-201ENST00000401408 ATP5F1P24539 256 aaPredicted RBP4.32□□□□□ -1.72
CLHC1-201ENST00000401408 CNTFP26441 200 aa4.32□□□□□ -1.72
CLHC1-201ENST00000401408 ALDH1B1P30837 517 aa4.32□□□□□ -1.72
CLHC1-201ENST00000401408 RDXP35241 583 aaKnown RBP4.32□□□□□ -1.72
CLHC1-201ENST00000401408 RECQLP46063 649 aaPredicted RBP4.32□□□□□ -1.72
CLHC1-201ENST00000401408 NEK4P51957 841 aa4.32□□□□□ -1.72
CLHC1-201ENST00000401408 DRG2P55039 364 aaKnown RBP4.32□□□□□ -1.72
CLHC1-201ENST00000401408 C21orf58P58505 322 aa4.32□□□□□ -1.72
CLHC1-201ENST00000401408 ZBTB16Q05516 673 aa4.32□□□□□ -1.72
CLHC1-201ENST00000401408 KLHL30Q0D2K2 578 aa4.32□□□□□ -1.72
CLHC1-201ENST00000401408 GRB10Q13322 594 aa4.32□□□□□ -1.72
CLHC1-201ENST00000401408 SMAD4Q13485 552 aaKnown RBP4.32□□□□□ -1.72
CLHC1-201ENST00000401408 ITPK1Q13572 414 aa4.32□□□□□ -1.72
CLHC1-201ENST00000401408 LONRF2Q1L5Z9 754 aa4.32□□□□□ -1.72
CLHC1-201ENST00000401408 CTC1Q2NKJ3 1217 aa4.32□□□□□ -1.72
CLHC1-201ENST00000401408 FAM26DQ5JW98 314 aa4.32□□□□□ -1.72
CLHC1-201ENST00000401408 MRM1Q6IN84 353 aaKnown RBP4.32□□□□□ -1.72
CLHC1-201ENST00000401408 NXPE4Q6UWF7 544 aa4.32□□□□□ -1.72
CLHC1-201ENST00000401408 KIAA1211Q6ZU35 1233 aa4.32□□□□□ -1.72
CLHC1-201ENST00000401408 SYDE1Q6ZW31 735 aaPredicted RBP4.32□□□□□ -1.72
CLHC1-201ENST00000401408 GALNT7Q86SF2 657 aa4.32□□□□□ -1.72
CLHC1-201ENST00000401408 NLRP8Q86W28 1048 aa4.32□□□□□ -1.72
CLHC1-201ENST00000401408 COLGALT2Q8IYK4 626 aa4.32□□□□□ -1.72
CLHC1-201ENST00000401408 CCDC170Q8IYT3 715 aa4.32□□□□□ -1.72
CLHC1-201ENST00000401408 AHI1Q8N157 1196 aa4.32□□□□□ -1.72
CLHC1-201ENST00000401408 LRRC71Q8N4P6 559 aa4.32□□□□□ -1.72
CLHC1-201ENST00000401408 CCDC148Q8NFR7 591 aa4.32□□□□□ -1.72
CLHC1-201ENST00000401408 USP7Q93009 1102 aa4.32□□□□□ -1.72
CLHC1-201ENST00000401408 ZNF669Q96BR6 464 aaPredicted RBP4.32□□□□□ -1.72
CLHC1-201ENST00000401408 FERD3LQ96RJ6 166 aa4.32□□□□□ -1.72
CLHC1-201ENST00000401408 CAPS2Q9BXY5 557 aa4.32□□□□□ -1.72
CLHC1-201ENST00000401408 TXLNGYQ9BZA5 131 aa4.32□□□□□ -1.72
CLHC1-201ENST00000401408 TAOK3Q9H2K8 898 aa4.32□□□□□ -1.72
CLHC1-201ENST00000401408 OLA1Q9NTK5 396 aaKnown RBP4.32□□□□□ -1.72
CLHC1-201ENST00000401408 INTS7Q9NVH2 962 aaKnown RBP4.32□□□□□ -1.72
CLHC1-201ENST00000401408 MCM9Q9NXL9 1143 aa4.32□□□□□ -1.72
CLHC1-201ENST00000401408 CALCOCO1Q9P1Z2 691 aa4.32□□□□□ -1.72
CLHC1-201ENST00000401408 BARX2Q9UMQ3 279 aaPredicted RBP4.32□□□□□ -1.72
CLHC1-201ENST00000401408 KCNH4Q9UQ05 1017 aa4.32□□□□□ -1.72
CLHC1-201ENST00000401408 CNPY2Q9Y2B0 182 aa4.32□□□□□ -1.72
CLHC1-201ENST00000401408 INSRP06213 1382 aa4.32□□□□□ -1.72
CLHC1-201ENST00000401408 TRIOBPQ9H2D6 2365 aa4.32□□□□□ -1.72
CLHC1-201ENST00000401408 CGNL1Q0VF96 1302 aa4.32□□□□□ -1.72
CLHC1-201ENST00000401408 RNF123Q5XPI4 1314 aa4.32□□□□□ -1.72
CLHC1-201ENST00000401408 WDR33Q9C0J8 1336 aaKnown RBP4.32□□□□□ -1.72
CLHC1-201ENST00000401408 A6NLC8 198 aa4.31□□□□□ -1.72
CLHC1-201ENST00000401408 A8MVJ9 347 aa4.31□□□□□ -1.72
CLHC1-201ENST00000401408 H0Y626 953 aa4.31□□□□□ -1.72
CLHC1-201ENST00000401408 NEMP1O14524 444 aa4.31□□□□□ -1.72
CLHC1-201ENST00000401408 SLC7A4O43246 635 aa4.31□□□□□ -1.72
CLHC1-201ENST00000401408 TBCAO75347 108 aaKnown RBP4.31□□□□□ -1.72
CLHC1-201ENST00000401408 DGAT1O75907 488 aa4.31□□□□□ -1.72
CLHC1-201ENST00000401408 STARD3NLO95772 234 aa4.31□□□□□ -1.72
CLHC1-201ENST00000401408 CYP1A2P05177 515 aa4.31□□□□□ -1.72
CLHC1-201ENST00000401408 PYGMP11217 842 aa4.31□□□□□ -1.72
CLHC1-201ENST00000401408 HARSP12081 509 aaKnown RBP4.31□□□□□ -1.72
CLHC1-201ENST00000401408 ACTN2P35609 894 aa4.31□□□□□ -1.72
CLHC1-201ENST00000401408 PPM1AP35813 382 aa4.31□□□□□ -1.72
CLHC1-201ENST00000401408 ASMTP46597 345 aa4.31□□□□□ -1.72
CLHC1-201ENST00000401408 ZNF252P-AS1Q0IIN9 211 aa4.31□□□□□ -1.72
CLHC1-201ENST00000401408 PCBP2Q15366 365 aaKnown RBP eCLIP4.31□□□□□ -1.72
CLHC1-201ENST00000401408 CCDC85BQ15834 202 aaPredicted RBP4.31□□□□□ -1.72
CLHC1-201ENST00000401408 PKN1Q16512 942 aa4.31□□□□□ -1.72
CLHC1-201ENST00000401408 MAP3K11Q16584 847 aa4.31□□□□□ -1.72
CLHC1-201ENST00000401408 ZSCAN26Q16670 478 aa4.31□□□□□ -1.72
CLHC1-201ENST00000401408 IMMTQ16891 758 aaKnown RBP4.31□□□□□ -1.72
CLHC1-201ENST00000401408 ZNF423Q2M1K9 1284 aa4.31□□□□□ -1.72
CLHC1-201ENST00000401408 CCDC152Q4G0S7 254 aa4.31□□□□□ -1.72
CLHC1-201ENST00000401408 SPDYCQ5MJ68 293 aa4.31□□□□□ -1.72
CLHC1-201ENST00000401408 GPR139Q6DWJ6 353 aa4.31□□□□□ -1.72
CLHC1-201ENST00000401408 RAB12Q6IQ22 244 aa4.31□□□□□ -1.72
CLHC1-201ENST00000401408 ANGPTL8Q6UXH0 198 aa4.31□□□□□ -1.72
CLHC1-201ENST00000401408 CCDC80Q76M96 950 aa4.31□□□□□ -1.72
CLHC1-201ENST00000401408 NUP54Q7Z3B4 507 aa4.31□□□□□ -1.72
CLHC1-201ENST00000401408 TMTC1Q8IUR5 882 aa4.31□□□□□ -1.72
CLHC1-201ENST00000401408 NUP93Q8N1F7 819 aa4.31□□□□□ -1.72
CLHC1-201ENST00000401408 ANKRD52Q8NB46 1076 aa4.31□□□□□ -1.72
CLHC1-201ENST00000401408 FBXO30Q8TB52 745 aa4.31□□□□□ -1.72
CLHC1-201ENST00000401408 IP6K1Q92551 441 aa4.31□□□□□ -1.72
CLHC1-201ENST00000401408 RABGGTAQ92696 567 aa4.31□□□□□ -1.72
CLHC1-201ENST00000401408 HSPBAP1Q96EW2 488 aa4.31□□□□□ -1.72
CLHC1-201ENST00000401408 NAF1Q96HR8 494 aaKnown RBP4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms