RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 EPB41P11171 864 aaKnown RBP16.56■□□□□ 0.24
COL25A1-201ENST00000399126 ACTN1P12814 892 aa16.56■□□□□ 0.24
COL25A1-201ENST00000399126 ADORA2AP29274 412 aa16.56■□□□□ 0.24
COL25A1-201ENST00000399126 TCF7P36402 384 aaPredicted RBP16.56■□□□□ 0.24
COL25A1-201ENST00000399126 HUNKP57058 714 aa16.56■□□□□ 0.24
COL25A1-201ENST00000399126 FIGNQ5HY92 759 aa16.56■□□□□ 0.24
COL25A1-201ENST00000399126 GJC2Q5T442 439 aaPredicted RBP16.56■□□□□ 0.24
COL25A1-201ENST00000399126 STXBP4Q6ZWJ1 553 aa16.56■□□□□ 0.24
COL25A1-201ENST00000399126 BAP1Q92560 729 aa16.56■□□□□ 0.24
COL25A1-201ENST00000399126 LZTFL1Q9NQ48 299 aa16.56■□□□□ 0.24
COL25A1-201ENST00000399126 TFR2Q9UP52 801 aa16.56■□□□□ 0.24
COL25A1-201ENST00000399126 IGKV6D-21A0A0A0MT36 114 aa16.56■□□□□ 0.24
COL25A1-201ENST00000399126 RIOK3O14730 519 aaKnown RBP16.56■□□□□ 0.24
COL25A1-201ENST00000399126 ZSCAN12O43309 604 aa16.56■□□□□ 0.24
COL25A1-201ENST00000399126 OATP04181 439 aa16.56■□□□□ 0.24
COL25A1-201ENST00000399126 XRCC5P13010 732 aaKnown RBP16.56■□□□□ 0.24
COL25A1-201ENST00000399126 COPB2P35606 906 aa16.56■□□□□ 0.24
COL25A1-201ENST00000399126 NCKAP1LP55160 1127 aa16.56■□□□□ 0.24
COL25A1-201ENST00000399126 XKR3Q5GH77 459 aa16.56■□□□□ 0.24
COL25A1-201ENST00000399126 METTL7BQ6UX53 244 aa16.56■□□□□ 0.24
COL25A1-201ENST00000399126 FAM186BQ8IYM0 893 aa16.56■□□□□ 0.24
COL25A1-201ENST00000399126 TMEM161BQ8NDZ6 487 aa16.56■□□□□ 0.24
COL25A1-201ENST00000399126 MLXIPQ9HAP2 919 aa16.56■□□□□ 0.24
COL25A1-201ENST00000399126 DMAC2Q9NW81 257 aa16.56■□□□□ 0.24
COL25A1-201ENST00000399126 REXO2Q9Y3B8 237 aaKnown RBP16.56■□□□□ 0.24
COL25A1-201ENST00000399126 LRRC53A6NM62 1247 aa16.55■□□□□ 0.24
COL25A1-201ENST00000399126 SLC16A3O15427 465 aaKnown RBP16.55■□□□□ 0.24
COL25A1-201ENST00000399126 CCDC175P0C221 793 aa16.55■□□□□ 0.24
COL25A1-201ENST00000399126 SLC9A1P19634 815 aa16.55■□□□□ 0.24
COL25A1-201ENST00000399126 GTF2BQ00403 316 aa16.55■□□□□ 0.24
COL25A1-201ENST00000399126 NEDD9Q14511 834 aa16.55■□□□□ 0.24
COL25A1-201ENST00000399126 MEA1Q16626 185 aa16.55■□□□□ 0.24
COL25A1-201ENST00000399126 RRAGAQ7L523 313 aa16.55■□□□□ 0.24
COL25A1-201ENST00000399126 ANKRD23Q86SG2 305 aa16.55■□□□□ 0.24
COL25A1-201ENST00000399126 SHCBP1Q8NEM2 672 aa16.55■□□□□ 0.24
COL25A1-201ENST00000399126 TMEM143Q96AN5 459 aa16.55■□□□□ 0.24
COL25A1-201ENST00000399126 A0A1W2PQJ5 194 aa16.55■□□□□ 0.24
COL25A1-201ENST00000399126 TPD52L2O43399 206 aaKnown RBP16.55■□□□□ 0.24
COL25A1-201ENST00000399126 DGAT1O75907 488 aa16.55■□□□□ 0.24
COL25A1-201ENST00000399126 TRIM49P0CI25 452 aa16.55■□□□□ 0.24
COL25A1-201ENST00000399126 TRIM49CP0CI26 452 aa16.55■□□□□ 0.24
COL25A1-201ENST00000399126 MARK3P27448 753 aa16.55■□□□□ 0.24
COL25A1-201ENST00000399126 ARMCX2Q7L311 632 aa16.55■□□□□ 0.24
COL25A1-201ENST00000399126 NEK11Q8NG66 645 aa16.55■□□□□ 0.24
COL25A1-201ENST00000399126 TSC1Q92574 1164 aa16.55■□□□□ 0.24
COL25A1-201ENST00000399126 FAM184BQ9ULE4 1060 aa16.55■□□□□ 0.24
COL25A1-201ENST00000399126 USP20Q9Y2K6 914 aa16.55■□□□□ 0.24
COL25A1-201ENST00000399126 AFPP02771 609 aaKnown RBP16.54■□□□□ 0.24
COL25A1-201ENST00000399126 MAPTP10636 758 aaKnown RBP16.54■□□□□ 0.24
COL25A1-201ENST00000399126 PSMC2P35998 433 aaKnown RBP16.54■□□□□ 0.24
COL25A1-201ENST00000399126 DMP1Q13316 513 aaPredicted RBP16.54■□□□□ 0.24
COL25A1-201ENST00000399126 EMC2Q15006 297 aa16.54■□□□□ 0.24
COL25A1-201ENST00000399126 ACCSQ96QU6 501 aa16.54■□□□□ 0.24
COL25A1-201ENST00000399126 TIPINQ9BVW5 301 aa16.54■□□□□ 0.24
COL25A1-201ENST00000399126 ATP6V0A4Q9HBG4 840 aa16.54■□□□□ 0.24
COL25A1-201ENST00000399126 DENND3A2RUS2 1198 aa16.54■□□□□ 0.24
COL25A1-201ENST00000399126 ANKRD63C9JTQ0 380 aa16.54■□□□□ 0.24
COL25A1-201ENST00000399126 DKC1O60832 514 aaKnown RBP eCLIP16.54■□□□□ 0.24
COL25A1-201ENST00000399126 TGFB3P10600 412 aa16.54■□□□□ 0.24
COL25A1-201ENST00000399126 POLR2FP61218 127 aaKnown RBP16.54■□□□□ 0.24
COL25A1-201ENST00000399126 NFIL3Q16649 462 aa16.54■□□□□ 0.24
COL25A1-201ENST00000399126 CCDC62Q6P9F0 684 aa16.54■□□□□ 0.24
COL25A1-201ENST00000399126 CEP89Q96ST8 783 aa16.54■□□□□ 0.24
COL25A1-201ENST00000399126 POLR3FQ9H1D9 316 aaPredicted RBP16.54■□□□□ 0.24
COL25A1-201ENST00000399126 KMT5AQ9NQR1 393 aa16.54■□□□□ 0.24
COL25A1-201ENST00000399126 TRPM7Q96QT4 1865 aa16.54■□□□□ 0.24
COL25A1-201ENST00000399126 CCP110O43303 1012 aa16.53■□□□□ 0.24
COL25A1-201ENST00000399126 EXOC3O60645 756 aa16.53■□□□□ 0.24
COL25A1-201ENST00000399126 NDUFA10O95299 355 aa16.53■□□□□ 0.24
COL25A1-201ENST00000399126 ZBTB48P10074 688 aaPredicted RBP16.53■□□□□ 0.24
COL25A1-201ENST00000399126 STAT5BP51692 787 aa16.53■□□□□ 0.24
COL25A1-201ENST00000399126 POLGP54098 1239 aaPredicted RBP16.53■□□□□ 0.24
COL25A1-201ENST00000399126 CELF3Q5SZQ8 465 aaKnown RBP16.53■□□□□ 0.24
COL25A1-201ENST00000399126 DPY19L2P1Q6NXN4 242 aa16.53■□□□□ 0.24
COL25A1-201ENST00000399126 WDR24Q96S15 920 aa16.53■□□□□ 0.24
COL25A1-201ENST00000399126 GPR20Q99678 358 aa16.53■□□□□ 0.24
COL25A1-201ENST00000399126 DNAI1Q9UI46 699 aa16.53■□□□□ 0.24
COL25A1-201ENST00000399126 SLC45A1Q9Y2W3 748 aa16.53■□□□□ 0.24
COL25A1-201ENST00000399126 EPN1Q9Y6I3 576 aaPredicted RBP16.53■□□□□ 0.24
COL25A1-201ENST00000399126 TXNP10599 105 aaKnown RBP16.53■□□□□ 0.24
COL25A1-201ENST00000399126 ETF1P62495 437 aaKnown RBP16.53■□□□□ 0.24
COL25A1-201ENST00000399126 CCNA1P78396 465 aa16.53■□□□□ 0.24
COL25A1-201ENST00000399126 DRP2Q13474 957 aa16.53■□□□□ 0.24
COL25A1-201ENST00000399126 TSR1Q2NL82 804 aaKnown RBP16.53■□□□□ 0.24
COL25A1-201ENST00000399126 ZNF792Q3KQV3 632 aa16.53■□□□□ 0.24
COL25A1-201ENST00000399126 SEPT1Q8WYJ6 367 aa16.53■□□□□ 0.24
COL25A1-201ENST00000399126 KIFAP3Q92845 792 aa16.53■□□□□ 0.24
COL25A1-201ENST00000399126 ST6GALNAC4Q9H4F1 302 aa16.53■□□□□ 0.24
COL25A1-201ENST00000399126 NHEJ1Q9H9Q4 299 aaPredicted RBP16.53■□□□□ 0.24
COL25A1-201ENST00000399126 ARHGAP20Q9P2F6 1191 aa16.53■□□□□ 0.24
COL25A1-201ENST00000399126 TBX20Q9UMR3 447 aa16.53■□□□□ 0.24
COL25A1-201ENST00000399126 PLAGL2Q9UPG8 496 aa16.53■□□□□ 0.24
COL25A1-201ENST00000399126 GOLGA8IPA6NC78 632 aa16.53■□□□□ 0.24
COL25A1-201ENST00000399126 GOLGA8JA6NMD2 632 aa16.53■□□□□ 0.24
COL25A1-201ENST00000399126 ADSSP30520 456 aa16.53■□□□□ 0.24
COL25A1-201ENST00000399126 DLG4P78352 724 aa16.53■□□□□ 0.24
COL25A1-201ENST00000399126 MYBPC2Q14324 1141 aa16.53■□□□□ 0.24
COL25A1-201ENST00000399126 CACNA2D4Q7Z3S7 1137 aa16.53■□□□□ 0.24
COL25A1-201ENST00000399126 ZNF397Q8NF99 534 aaPredicted RBP16.53■□□□□ 0.24
COL25A1-201ENST00000399126 ASAP3Q8TDY4 903 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms