RNA–Protein interactions for RNA: ENST00000398488.5

MBD1-207, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 1,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-207ENST00000398488 SLC26A4O43511 780 aa17.51■□□□□ 0.39
MBD1-207ENST00000398488 GAS2O43903 313 aaKnown RBP17.51■□□□□ 0.39
MBD1-207ENST00000398488 ACTN1P12814 892 aa17.51■□□□□ 0.39
MBD1-207ENST00000398488 ME1P48163 572 aa17.51■□□□□ 0.39
MBD1-207ENST00000398488 RABGGTBP53611 331 aa17.51■□□□□ 0.39
MBD1-207ENST00000398488 KRT85P78386 507 aa17.51■□□□□ 0.39
MBD1-207ENST00000398488 CACNB1Q02641 598 aaPredicted RBP17.51■□□□□ 0.39
MBD1-207ENST00000398488 RAD51AP2Q09MP3 1159 aa17.51■□□□□ 0.39
MBD1-207ENST00000398488 PAK2Q13177 524 aa17.51■□□□□ 0.39
MBD1-207ENST00000398488 EXOC8Q8IYI6 725 aa17.51■□□□□ 0.39
MBD1-207ENST00000398488 PDILTQ8N807 584 aa17.51■□□□□ 0.39
MBD1-207ENST00000398488 RNF149Q8NC42 400 aa17.51■□□□□ 0.39
MBD1-207ENST00000398488 TCP11Q8WWU5 503 aa17.51■□□□□ 0.39
MBD1-207ENST00000398488 SCLT1Q96NL6 688 aa17.51■□□□□ 0.39
MBD1-207ENST00000398488 SLC4A7Q9Y6M7 1214 aa17.51■□□□□ 0.39
MBD1-207ENST00000398488 SFI1A8K8P3 1242 aa17.5■□□□□ 0.39
MBD1-207ENST00000398488 HIP1RO75146 1068 aa17.5■□□□□ 0.39
MBD1-207ENST00000398488 BAIAP3O94812 1187 aa17.5■□□□□ 0.39
MBD1-207ENST00000398488 MYOGP15173 224 aa17.5■□□□□ 0.39
MBD1-207ENST00000398488 DSC3Q14574 896 aa17.5■□□□□ 0.39
MBD1-207ENST00000398488 ZNF410Q86VK4 478 aa17.5■□□□□ 0.39
MBD1-207ENST00000398488 USP38Q8NB14 1042 aa17.5■□□□□ 0.39
MBD1-207ENST00000398488 MCPH1Q8NEM0 835 aa17.5■□□□□ 0.39
MBD1-207ENST00000398488 SPATA32Q96LK8 384 aa17.5■□□□□ 0.39
MBD1-207ENST00000398488 RRAGBQ5VZM2 374 aa17.49■□□□□ 0.39
MBD1-207ENST00000398488 RASSF8Q8NHQ8 419 aa17.49■□□□□ 0.39
MBD1-207ENST00000398488 KIFC3Q9BVG8 833 aa17.49■□□□□ 0.39
MBD1-207ENST00000398488 GCOM2Q9BZD3 368 aaPredicted RBP17.49■□□□□ 0.39
MBD1-207ENST00000398488 ADGRA3Q8IWK6 1321 aa17.49■□□□□ 0.39
MBD1-207ENST00000398488 ASAP2O43150 1006 aa17.48■□□□□ 0.39
MBD1-207ENST00000398488 ATP2A2P16615 1042 aaKnown RBP17.48■□□□□ 0.39
MBD1-207ENST00000398488 PTENP60484 403 aa17.48■□□□□ 0.39
MBD1-207ENST00000398488 MXD4Q14582 209 aaPredicted RBP17.48■□□□□ 0.39
MBD1-207ENST00000398488 E2F4Q16254 413 aa17.48■□□□□ 0.39
MBD1-207ENST00000398488 TPRNQ4KMQ1 711 aa17.48■□□□□ 0.39
MBD1-207ENST00000398488 RESP18Q5W5W9 173 aa17.48■□□□□ 0.39
MBD1-207ENST00000398488 FAM117BQ6P1L5 589 aa17.48■□□□□ 0.39
MBD1-207ENST00000398488 GPBP1Q86WP2 473 aa17.48■□□□□ 0.39
MBD1-207ENST00000398488 LARP4BQ92615 738 aaKnown RBP17.48■□□□□ 0.39
MBD1-207ENST00000398488 APBB2Q92870 758 aa17.48■□□□□ 0.39
MBD1-207ENST00000398488 CIZ1Q9ULV3 898 aaPredicted RBP17.48■□□□□ 0.39
MBD1-207ENST00000398488 USP20Q9Y2K6 914 aa17.48■□□□□ 0.39
MBD1-207ENST00000398488 YBX2Q9Y2T7 364 aaKnown RBP17.48■□□□□ 0.39
MBD1-207ENST00000398488 GBF1Q92538 1859 aa17.48■□□□□ 0.39
MBD1-207ENST00000398488 SZT2Q5T011 3432 aa17.48■□□□□ 0.39
MBD1-207ENST00000398488 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.47■□□□□ 0.39
MBD1-207ENST00000398488 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.47■□□□□ 0.39
MBD1-207ENST00000398488 TTLL13PA6NNM8 815 aa17.47■□□□□ 0.39
MBD1-207ENST00000398488 GPR182O15218 404 aa17.47■□□□□ 0.39
MBD1-207ENST00000398488 ARHGEF15O94989 841 aa17.47■□□□□ 0.39
MBD1-207ENST00000398488 EDN1P05305 212 aa17.47■□□□□ 0.39
MBD1-207ENST00000398488 GUCY2CP25092 1073 aa17.47■□□□□ 0.39
MBD1-207ENST00000398488 FXR1P51114 621 aaKnown RBP eCLIP17.47■□□□□ 0.39
MBD1-207ENST00000398488 CDC42EP1Q00587 391 aa17.47■□□□□ 0.39
MBD1-207ENST00000398488 MBTD1Q05BQ5 628 aa17.47■□□□□ 0.39
MBD1-207ENST00000398488 AMHR2Q16671 573 aa17.47■□□□□ 0.39
MBD1-207ENST00000398488 IFNLR1Q8IU57 520 aaPredicted RBP17.47■□□□□ 0.39
MBD1-207ENST00000398488 HERC6Q8IVU3 1022 aa17.47■□□□□ 0.39
MBD1-207ENST00000398488 CRIPAKQ8N1N5 446 aa17.47■□□□□ 0.39
MBD1-207ENST00000398488 KCTD17Q8N5Z5 321 aa17.47■□□□□ 0.39
MBD1-207ENST00000398488 STAMQ92783 540 aa17.47■□□□□ 0.39
MBD1-207ENST00000398488 ADAM2Q99965 735 aa17.47■□□□□ 0.39
MBD1-207ENST00000398488 PBX4Q9BYU1 374 aa17.47■□□□□ 0.39
MBD1-207ENST00000398488 CCDC39Q9UFE4 941 aa17.47■□□□□ 0.39
MBD1-207ENST00000398488 ATP6V1DQ9Y5K8 247 aa17.47■□□□□ 0.39
MBD1-207ENST00000398488 LRRIQ4A6NIV6 560 aa17.47■□□□□ 0.39
MBD1-207ENST00000398488 KCNJ6P48051 423 aa17.47■□□□□ 0.39
MBD1-207ENST00000398488 GIT2Q14161 759 aa17.47■□□□□ 0.39
MBD1-207ENST00000398488 MYOCDQ8IZQ8 938 aa17.47■□□□□ 0.39
MBD1-207ENST00000398488 ZNF710Q8N1W2 664 aa17.47■□□□□ 0.39
MBD1-207ENST00000398488 REEP2Q9BRK0 252 aa17.47■□□□□ 0.39
MBD1-207ENST00000398488 TSPYL2Q9H2G4 693 aaPredicted RBP17.47■□□□□ 0.39
MBD1-207ENST00000398488 MTIF3Q9H2K0 278 aaKnown RBP17.47■□□□□ 0.39
MBD1-207ENST00000398488 A0A1B0GVL5 298 aa17.46■□□□□ 0.39
MBD1-207ENST00000398488 MYMKA6NI61 221 aa17.46■□□□□ 0.39
MBD1-207ENST00000398488 B4GALT5O43286 388 aa17.46■□□□□ 0.39
MBD1-207ENST00000398488 UPP2O95045 317 aa17.46■□□□□ 0.39
MBD1-207ENST00000398488 HOXA11P31270 313 aaPredicted RBP17.46■□□□□ 0.39
MBD1-207ENST00000398488 TXLNAP40222 546 aa17.46■□□□□ 0.39
MBD1-207ENST00000398488 POU5F1BQ06416 359 aa17.46■□□□□ 0.39
MBD1-207ENST00000398488 CDCA2Q69YH5 1023 aaPredicted RBP17.46■□□□□ 0.39
MBD1-207ENST00000398488 SPRED2Q7Z698 418 aa17.46■□□□□ 0.39
MBD1-207ENST00000398488 SRGAP1Q7Z6B7 1085 aa17.46■□□□□ 0.39
MBD1-207ENST00000398488 DHX58Q96C10 678 aa17.46■□□□□ 0.39
MBD1-207ENST00000398488 SLC9A7Q96T83 725 aa17.46■□□□□ 0.39
MBD1-207ENST00000398488 RGS18Q9NS28 235 aa17.46■□□□□ 0.39
MBD1-207ENST00000398488 CHMP5Q9NZZ3 219 aa17.46■□□□□ 0.39
MBD1-207ENST00000398488 STK17AQ9UEE5 414 aa17.46■□□□□ 0.39
MBD1-207ENST00000398488 COL4A6Q14031 1691 aa17.45■□□□□ 0.38
MBD1-207ENST00000398488 CHD9Q3L8U1 2897 aa17.45■□□□□ 0.38
MBD1-207ENST00000398488 LCHNA4D1U4 455 aa17.45■□□□□ 0.38
MBD1-207ENST00000398488 C9IYK1 514 aa17.45■□□□□ 0.38
MBD1-207ENST00000398488 IBSPP21815 317 aaPredicted RBP17.45■□□□□ 0.38
MBD1-207ENST00000398488 STAT6P42226 847 aa17.45■□□□□ 0.38
MBD1-207ENST00000398488 PHKA2P46019 1235 aa17.45■□□□□ 0.38
MBD1-207ENST00000398488 NPTX2P47972 431 aa17.45■□□□□ 0.38
MBD1-207ENST00000398488 PEX3P56589 373 aa17.45■□□□□ 0.38
MBD1-207ENST00000398488 SMAD3P84022 425 aaKnown RBP17.45■□□□□ 0.38
MBD1-207ENST00000398488 TFDP1Q14186 410 aa17.45■□□□□ 0.38
MBD1-207ENST00000398488 ADALQ6DHV7 355 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms