RNA–Protein interactions for RNA: ENST00000397766.3

PGBD4-201, Transcript of piggyBac transposable element derived 4, humanhuman

APPRIS P1 BASIC

Gene PGBD4, Length 6,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4-201ENST00000397766 PDXDC1Q6P996 788 aa6.65□□□□□ -1.34
PGBD4-201ENST00000397766 PIGBQ92521 554 aa6.65□□□□□ -1.34
PGBD4-201ENST00000397766 ZNF560Q96MR9 790 aa6.65□□□□□ -1.34
PGBD4-201ENST00000397766 DDX50Q9BQ39 737 aaKnown RBP6.65□□□□□ -1.34
PGBD4-201ENST00000397766 AP1M1Q9BXS5 423 aa6.65□□□□□ -1.34
PGBD4-201ENST00000397766 PITPNM3Q9BZ71 974 aa6.65□□□□□ -1.34
PGBD4-201ENST00000397766 KLHL8Q9P2G9 620 aaPredicted RBP6.65□□□□□ -1.34
PGBD4-201ENST00000397766 L3MBTL1Q9Y468 752 aa6.65□□□□□ -1.34
PGBD4-201ENST00000397766 EEF1DP29692 281 aaKnown RBP6.65□□□□□ -1.35
PGBD4-201ENST00000397766 MCAMP43121 646 aa6.65□□□□□ -1.35
PGBD4-201ENST00000397766 USP11P51784 963 aa6.65□□□□□ -1.35
PGBD4-201ENST00000397766 KRT33BQ14525 404 aa6.65□□□□□ -1.35
PGBD4-201ENST00000397766 RWDD4Q6NW29 188 aaKnown RBP6.65□□□□□ -1.35
PGBD4-201ENST00000397766 SH3RF3Q8TEJ3 882 aaPredicted RBP6.65□□□□□ -1.35
PGBD4-201ENST00000397766 POLR3CQ9BUI4 534 aaPredicted RBP6.65□□□□□ -1.35
PGBD4-201ENST00000397766 XAB2Q9HCS7 855 aaKnown RBP6.65□□□□□ -1.35
PGBD4-201ENST00000397766 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.65□□□□□ -1.35
PGBD4-201ENST00000397766 NOP53Q9NZM5 478 aaKnown RBP6.65□□□□□ -1.35
PGBD4-201ENST00000397766 GOLGA8IPA6NC78 632 aa6.65□□□□□ -1.35
PGBD4-201ENST00000397766 GOLGA8JA6NMD2 632 aa6.65□□□□□ -1.35
PGBD4-201ENST00000397766 HNRNPCL2B2RXH8 293 aa6.65□□□□□ -1.35
PGBD4-201ENST00000397766 PSMD3O43242 534 aa6.65□□□□□ -1.35
PGBD4-201ENST00000397766 ORC4O43929 436 aa6.65□□□□□ -1.35
PGBD4-201ENST00000397766 HNRNPCL1O60812 293 aaKnown RBP6.65□□□□□ -1.35
PGBD4-201ENST00000397766 ZRANB2O95218 330 aaKnown RBP eCLIP6.65□□□□□ -1.35
PGBD4-201ENST00000397766 HOXA13P31271 388 aaPredicted RBP6.65□□□□□ -1.35
PGBD4-201ENST00000397766 PMS2P54278 862 aa6.65□□□□□ -1.35
PGBD4-201ENST00000397766 TMPRSS15P98073 1019 aa6.65□□□□□ -1.35
PGBD4-201ENST00000397766 STILQ15468 1287 aa6.65□□□□□ -1.35
PGBD4-201ENST00000397766 KIF19Q2TAC6 998 aa6.65□□□□□ -1.35
PGBD4-201ENST00000397766 MB21D2Q8IYB1 491 aaPredicted RBP6.65□□□□□ -1.35
PGBD4-201ENST00000397766 TMEM47Q9BQJ4 181 aa6.65□□□□□ -1.35
PGBD4-201ENST00000397766 NEDD4P46934 1319 aa6.65□□□□□ -1.35
PGBD4-201ENST00000397766 FAM170AA1A519 330 aa6.65□□□□□ -1.35
PGBD4-201ENST00000397766 H3BRJ5 948 aa6.65□□□□□ -1.35
PGBD4-201ENST00000397766 STK25O00506 426 aa6.65□□□□□ -1.35
PGBD4-201ENST00000397766 CHUKO15111 745 aa6.65□□□□□ -1.35
PGBD4-201ENST00000397766 MMEP08473 750 aa6.65□□□□□ -1.35
PGBD4-201ENST00000397766 ZNF18P17022 549 aa6.65□□□□□ -1.35
PGBD4-201ENST00000397766 GUCY2CP25092 1073 aa6.65□□□□□ -1.35
PGBD4-201ENST00000397766 SLCO1A2P46721 670 aa6.65□□□□□ -1.35
PGBD4-201ENST00000397766 SLC12A1Q13621 1099 aa6.65□□□□□ -1.35
PGBD4-201ENST00000397766 EFHC2Q5JST6 749 aa6.65□□□□□ -1.35
PGBD4-201ENST00000397766 SLC27A3Q5K4L6 730 aa6.65□□□□□ -1.35
PGBD4-201ENST00000397766 TADA2BQ86TJ2 420 aa6.65□□□□□ -1.35
PGBD4-201ENST00000397766 RASSF3Q86WH2 238 aa6.65□□□□□ -1.35
PGBD4-201ENST00000397766 GAS2L3Q86XJ1 694 aa6.65□□□□□ -1.35
PGBD4-201ENST00000397766 SNF8Q96H20 258 aa6.65□□□□□ -1.35
PGBD4-201ENST00000397766 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.65□□□□□ -1.35
PGBD4-201ENST00000397766 MRPL4Q9BYD3 311 aaKnown RBP6.65□□□□□ -1.35
PGBD4-201ENST00000397766 ANAPC7Q9UJX3 599 aa6.65□□□□□ -1.35
PGBD4-201ENST00000397766 PNPLA7Q6ZV29 1317 aa6.64□□□□□ -1.35
PGBD4-201ENST00000397766 COL15A1P39059 1388 aa6.64□□□□□ -1.35
PGBD4-201ENST00000397766 ASB14A6NK59 587 aa6.64□□□□□ -1.35
PGBD4-201ENST00000397766 SCP2P22307 547 aa6.64□□□□□ -1.35
PGBD4-201ENST00000397766 EFNA5P52803 228 aa6.64□□□□□ -1.35
PGBD4-201ENST00000397766 OSTNP61366 133 aa6.64□□□□□ -1.35
PGBD4-201ENST00000397766 DHX34Q14147 1143 aaKnown RBP6.64□□□□□ -1.35
PGBD4-201ENST00000397766 GPD1LQ8N335 351 aa6.64□□□□□ -1.35
PGBD4-201ENST00000397766 ZNF564Q8TBZ8 553 aaPredicted RBP6.64□□□□□ -1.35
PGBD4-201ENST00000397766 SNX19Q92543 992 aa6.64□□□□□ -1.35
PGBD4-201ENST00000397766 GRAMD1AQ96CP6 724 aa6.64□□□□□ -1.35
PGBD4-201ENST00000397766 PPP1R2P1Q96PQ5 205 aa6.64□□□□□ -1.35
PGBD4-201ENST00000397766 MMTAG2Q9BU76 263 aaKnown RBP6.64□□□□□ -1.35
PGBD4-201ENST00000397766 OSBPL5Q9H0X9 879 aaPredicted RBP6.64□□□□□ -1.35
PGBD4-201ENST00000397766 PPCSQ9HAB8 311 aa6.64□□□□□ -1.35
PGBD4-201ENST00000397766 TUFT1Q9NNX1 390 aa6.64□□□□□ -1.35
PGBD4-201ENST00000397766 TBK1Q9UHD2 729 aa6.64□□□□□ -1.35
PGBD4-201ENST00000397766 NFU1Q9UMS0 254 aa6.64□□□□□ -1.35
PGBD4-201ENST00000397766 TARSL2A2RTX5 802 aaKnown RBP6.64□□□□□ -1.35
PGBD4-201ENST00000397766 LRRC53A6NM62 1247 aa6.64□□□□□ -1.35
PGBD4-201ENST00000397766 PFDN1O60925 122 aa6.64□□□□□ -1.35
PGBD4-201ENST00000397766 DTNBO60941 627 aa6.64□□□□□ -1.35
PGBD4-201ENST00000397766 VAMP7P51809 220 aa6.64□□□□□ -1.35
PGBD4-201ENST00000397766 TOB2Q14106 344 aaPredicted RBP6.64□□□□□ -1.35
PGBD4-201ENST00000397766 FAM83BQ5T0W9 1011 aa6.64□□□□□ -1.35
PGBD4-201ENST00000397766 FRMD5Q7Z6J6 570 aa6.64□□□□□ -1.35
PGBD4-201ENST00000397766 NOP9Q86U38 636 aaKnown RBP6.64□□□□□ -1.35
PGBD4-201ENST00000397766 KCTD17Q8N5Z5 321 aa6.64□□□□□ -1.35
PGBD4-201ENST00000397766 NLRP4Q96MN2 994 aa6.64□□□□□ -1.35
PGBD4-201ENST00000397766 IRAK4Q9NWZ3 460 aa6.64□□□□□ -1.35
PGBD4-201ENST00000397766 BARHL2Q9NY43 387 aa6.64□□□□□ -1.35
PGBD4-201ENST00000397766 ZFP69BQ9UJL9 534 aa6.64□□□□□ -1.35
PGBD4-201ENST00000397766 MYO1DO94832 1006 aa6.64□□□□□ -1.35
PGBD4-201ENST00000397766 GH2P01242 217 aa6.64□□□□□ -1.35
PGBD4-201ENST00000397766 ATP6V1E1P36543 226 aa6.64□□□□□ -1.35
PGBD4-201ENST00000397766 QARSP47897 775 aaKnown RBP6.64□□□□□ -1.35
PGBD4-201ENST00000397766 ROR1Q01973 937 aa6.64□□□□□ -1.35
PGBD4-201ENST00000397766 LAMB3Q13751 1172 aa6.64□□□□□ -1.35
PGBD4-201ENST00000397766 ZNF568Q3ZCX4 644 aa6.64□□□□□ -1.35
PGBD4-201ENST00000397766 EPM2AIP1Q7L775 607 aaPredicted RBP6.64□□□□□ -1.35
PGBD4-201ENST00000397766 TBC1D10CQ8IV04 446 aa6.64□□□□□ -1.35
PGBD4-201ENST00000397766 GUF1Q8N442 669 aaKnown RBP6.64□□□□□ -1.35
PGBD4-201ENST00000397766 RMDN3Q96TC7 470 aa6.64□□□□□ -1.35
PGBD4-201ENST00000397766 EML4Q9HC35 981 aaKnown RBP6.64□□□□□ -1.35
PGBD4-201ENST00000397766 SCHIP1Q9P0W5 487 aaPredicted RBP6.64□□□□□ -1.35
PGBD4-201ENST00000397766 FIS1Q9Y3D6 152 aa6.64□□□□□ -1.35
PGBD4-201ENST00000397766 MAP3K4Q9Y6R4 1608 aa6.64□□□□□ -1.35
PGBD4-201ENST00000397766 M0QYV0 167 aa6.64□□□□□ -1.35
PGBD4-201ENST00000397766 RAD17O75943 681 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms