RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 CYP3A7P24462 503 aa8.97□□□□□ -0.97
PTPRD-204ENST00000397606 TTC16Q8NEE8 873 aa8.97□□□□□ -0.97
PTPRD-204ENST00000397606 MAK16Q9BXY0 300 aaKnown RBP8.97□□□□□ -0.97
PTPRD-204ENST00000397606 NACA2Q9H009 215 aa8.97□□□□□ -0.97
PTPRD-204ENST00000397606 NID2Q14112 1375 aa8.97□□□□□ -0.97
PTPRD-204ENST00000397606 PPFIA4O75335 1185 aa8.97□□□□□ -0.97
PTPRD-204ENST00000397606 RBL2Q08999 1139 aa8.97□□□□□ -0.97
PTPRD-204ENST00000397606 MAP2K5Q13163 448 aa8.97□□□□□ -0.97
PTPRD-204ENST00000397606 TUBB2AQ13885 445 aa8.97□□□□□ -0.97
PTPRD-204ENST00000397606 LY6KQ17RY6 165 aa8.97□□□□□ -0.97
PTPRD-204ENST00000397606 ANKRD40Q6AI12 368 aa8.97□□□□□ -0.97
PTPRD-204ENST00000397606 KIAA1841Q6NSI8 718 aa8.97□□□□□ -0.97
PTPRD-204ENST00000397606 NAPGQ99747 312 aaPredicted RBP8.97□□□□□ -0.97
PTPRD-204ENST00000397606 TUBB2BQ9BVA1 445 aa8.97□□□□□ -0.97
PTPRD-204ENST00000397606 MYO1AQ9UBC5 1043 aa8.97□□□□□ -0.97
PTPRD-204ENST00000397606 DBR1Q9UK59 544 aaKnown RBP8.97□□□□□ -0.97
PTPRD-204ENST00000397606 TACC3Q9Y6A5 838 aa8.97□□□□□ -0.97
PTPRD-204ENST00000397606 EPN1Q9Y6I3 576 aaPredicted RBP8.97□□□□□ -0.97
PTPRD-204ENST00000397606 H3BRB1 525 aa8.97□□□□□ -0.97
PTPRD-204ENST00000397606 MED7O43513 233 aa8.97□□□□□ -0.97
PTPRD-204ENST00000397606 GCLMP48507 274 aa8.97□□□□□ -0.97
PTPRD-204ENST00000397606 KRT39Q6A163 491 aa8.97□□□□□ -0.97
PTPRD-204ENST00000397606 ZNF354CQ86Y25 554 aa8.97□□□□□ -0.97
PTPRD-204ENST00000397606 LRRC71Q8N4P6 559 aa8.97□□□□□ -0.97
PTPRD-204ENST00000397606 HPS3Q969F9 1004 aa8.97□□□□□ -0.97
PTPRD-204ENST00000397606 SAAL1Q96ER3 474 aa8.97□□□□□ -0.97
PTPRD-204ENST00000397606 HAUS4Q9H6D7 363 aa8.97□□□□□ -0.97
PTPRD-204ENST00000397606 TUT1Q9H6E5 874 aaKnown RBP8.97□□□□□ -0.97
PTPRD-204ENST00000397606 TSKSQ9UJT2 592 aa8.97□□□□□ -0.97
PTPRD-204ENST00000397606 PIN4Q9Y237 131 aaKnown RBP8.97□□□□□ -0.97
PTPRD-204ENST00000397606 CNTNAP1P78357 1384 aa8.97□□□□□ -0.97
PTPRD-204ENST00000397606 LRRN2O75325 713 aa8.96□□□□□ -0.97
PTPRD-204ENST00000397606 HSD17B4P51659 736 aa8.96□□□□□ -0.97
PTPRD-204ENST00000397606 HIRAP54198 1017 aaPredicted RBP8.96□□□□□ -0.97
PTPRD-204ENST00000397606 TMCO3Q6UWJ1 677 aa8.96□□□□□ -0.97
PTPRD-204ENST00000397606 ATP8B4Q8TF62 1192 aa8.96□□□□□ -0.97
PTPRD-204ENST00000397606 TRIM11Q96F44 468 aa8.96□□□□□ -0.97
PTPRD-204ENST00000397606 UBIAD1Q9Y5Z9 338 aa8.96□□□□□ -0.97
PTPRD-204ENST00000397606 MYH3P11055 1940 aa8.96□□□□□ -0.97
PTPRD-204ENST00000397606 TOMM70O94826 608 aa8.96□□□□□ -0.97
PTPRD-204ENST00000397606 ABCB4P21439 1286 aa8.96□□□□□ -0.97
PTPRD-204ENST00000397606 TAF3Q5VWG9 929 aa8.96□□□□□ -0.97
PTPRD-204ENST00000397606 DSTYKQ6XUX3 929 aa8.96□□□□□ -0.97
PTPRD-204ENST00000397606 URGCPQ8TCY9 931 aa8.96□□□□□ -0.97
PTPRD-204ENST00000397606 MTMR9Q96QG7 549 aa8.96□□□□□ -0.97
PTPRD-204ENST00000397606 MAP2K1Q02750 393 aaPredicted RBP8.96□□□□□ -0.98
PTPRD-204ENST00000397606 DUOXA2Q1HG44 320 aa8.96□□□□□ -0.98
PTPRD-204ENST00000397606 SH3D19Q5HYK7 790 aa8.96□□□□□ -0.98
PTPRD-204ENST00000397606 ACAP3Q96P50 834 aa8.96□□□□□ -0.98
PTPRD-204ENST00000397606 ZNF112Q9UJU3 913 aa8.96□□□□□ -0.98
PTPRD-204ENST00000397606 PAPPAQ13219 1627 aa8.96□□□□□ -0.98
PTPRD-204ENST00000397606 LOC102724159A0A0B4J2E5 919 aa8.96□□□□□ -0.98
PTPRD-204ENST00000397606 BFSP1Q12934 665 aa8.96□□□□□ -0.98
PTPRD-204ENST00000397606 PWP2Q15269 919 aaKnown RBP8.96□□□□□ -0.98
PTPRD-204ENST00000397606 PEX26Q7Z412 305 aa8.96□□□□□ -0.98
PTPRD-204ENST00000397606 CAPNS2Q96L46 248 aa8.96□□□□□ -0.98
PTPRD-204ENST00000397606 APBA2Q99767 749 aa8.96□□□□□ -0.98
PTPRD-204ENST00000397606 RUSC1Q9BVN2 902 aa8.96□□□□□ -0.98
PTPRD-204ENST00000397606 KCNMB3Q9NPA1 279 aa8.96□□□□□ -0.98
PTPRD-204ENST00000397606 HSPBP1Q9NZL4 362 aa8.96□□□□□ -0.98
PTPRD-204ENST00000397606 THAP12O43422 761 aa8.95□□□□□ -0.98
PTPRD-204ENST00000397606 TFRCP02786 760 aaKnown RBP8.95□□□□□ -0.98
PTPRD-204ENST00000397606 MYBP10242 640 aa8.95□□□□□ -0.98
PTPRD-204ENST00000397606 GUCY2CP25092 1073 aa8.95□□□□□ -0.98
PTPRD-204ENST00000397606 CLUL1Q15846 466 aa8.95□□□□□ -0.98
PTPRD-204ENST00000397606 TTC39CQ8N584 583 aa8.95□□□□□ -0.98
PTPRD-204ENST00000397606 TRIM58Q8NG06 486 aa8.95□□□□□ -0.98
PTPRD-204ENST00000397606 ZBED2Q9BTP6 218 aa8.95□□□□□ -0.98
PTPRD-204ENST00000397606 INPP5FQ9Y2H2 1132 aa8.95□□□□□ -0.98
PTPRD-204ENST00000397606 TRIM17Q9Y577 477 aa8.95□□□□□ -0.98
PTPRD-204ENST00000397606 RPS6KA5O75582 802 aa8.95□□□□□ -0.98
PTPRD-204ENST00000397606 CTSHP09668 335 aa8.95□□□□□ -0.98
PTPRD-204ENST00000397606 NAMPTP43490 491 aa8.95□□□□□ -0.98
PTPRD-204ENST00000397606 SKIDA1Q1XH10 827 aa8.95□□□□□ -0.98
PTPRD-204ENST00000397606 ZNF699Q32M78 642 aa8.95□□□□□ -0.98
PTPRD-204ENST00000397606 GSTA5Q7RTV2 222 aa8.95□□□□□ -0.98
PTPRD-204ENST00000397606 TLK2Q86UE8 772 aa8.95□□□□□ -0.98
PTPRD-204ENST00000397606 SCN7AQ01118 1682 aa8.95□□□□□ -0.98
PTPRD-204ENST00000397606 MSCO60682 206 aa8.95□□□□□ -0.98
PTPRD-204ENST00000397606 UBA1P22314 1058 aaKnown RBP8.95□□□□□ -0.98
PTPRD-204ENST00000397606 RFX1P22670 979 aa8.95□□□□□ -0.98
PTPRD-204ENST00000397606 TBXAS1P24557 533 aaPredicted RBP8.95□□□□□ -0.98
PTPRD-204ENST00000397606 LMAN1P49257 510 aa8.95□□□□□ -0.98
PTPRD-204ENST00000397606 CCDC170Q8IYT3 715 aa8.95□□□□□ -0.98
PTPRD-204ENST00000397606 PGBD4Q96DM1 585 aa8.95□□□□□ -0.98
PTPRD-204ENST00000397606 TEPSINQ96N21 525 aa8.95□□□□□ -0.98
PTPRD-204ENST00000397606 MKNK1Q9BUB5 465 aa8.95□□□□□ -0.98
PTPRD-204ENST00000397606 HMX1Q9NP08 348 aaPredicted RBP8.95□□□□□ -0.98
PTPRD-204ENST00000397606 CAPN9O14815 690 aa8.95□□□□□ -0.98
PTPRD-204ENST00000397606 PPP1R11O60927 126 aaPredicted RBP8.95□□□□□ -0.98
PTPRD-204ENST00000397606 GFPT2O94808 682 aa8.95□□□□□ -0.98
PTPRD-204ENST00000397606 SLITRK3O94933 977 aa8.95□□□□□ -0.98
PTPRD-204ENST00000397606 SERPING1P05155 500 aa8.95□□□□□ -0.98
PTPRD-204ENST00000397606 CD58P19256 250 aa8.95□□□□□ -0.98
PTPRD-204ENST00000397606 KLRC1P26715 233 aa8.95□□□□□ -0.98
PTPRD-204ENST00000397606 NLRP11P59045 1033 aaKnown RBP8.95□□□□□ -0.98
PTPRD-204ENST00000397606 RPS6KA1Q15418 735 aa8.95□□□□□ -0.98
PTPRD-204ENST00000397606 SEPT7Q16181 437 aaKnown RBP8.95□□□□□ -0.98
PTPRD-204ENST00000397606 ATF7IP2Q5U623 682 aa8.95□□□□□ -0.98
PTPRD-204ENST00000397606 CYP4F22Q6NT55 531 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms