RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 BAATQ14032 418 aaPredicted RBP11.32□□□□□ -0.6
CPSF1P1-201ENST00000397477 MTERF2Q49AM1 385 aa11.32□□□□□ -0.6
CPSF1P1-201ENST00000397477 FAM160B2Q86V87 743 aa11.32□□□□□ -0.6
CPSF1P1-201ENST00000397477 METTL13Q8N6R0 699 aa11.32□□□□□ -0.6
CPSF1P1-201ENST00000397477 SLC30A5Q8TAD4 765 aa11.32□□□□□ -0.6
CPSF1P1-201ENST00000397477 GOLGA5Q8TBA6 731 aa11.32□□□□□ -0.6
CPSF1P1-201ENST00000397477 BTBD6Q96KE9 485 aa11.32□□□□□ -0.6
CPSF1P1-201ENST00000397477 MXRA8Q9BRK3 442 aa11.32□□□□□ -0.6
CPSF1P1-201ENST00000397477 PI4K2AQ9BTU6 479 aa11.32□□□□□ -0.6
CPSF1P1-201ENST00000397477 RPAP3Q9H6T3 665 aaPredicted RBP11.32□□□□□ -0.6
CPSF1P1-201ENST00000397477 FAM53CQ9NYF3 392 aa11.32□□□□□ -0.6
CPSF1P1-201ENST00000397477 FEM1BQ9UK73 627 aa11.32□□□□□ -0.6
CPSF1P1-201ENST00000397477 USTQ9Y2C2 406 aa11.32□□□□□ -0.6
CPSF1P1-201ENST00000397477 ATP8A1Q9Y2Q0 1164 aa11.32□□□□□ -0.6
CPSF1P1-201ENST00000397477 ASTN2O75129 1339 aaPredicted RBP11.32□□□□□ -0.6
CPSF1P1-201ENST00000397477 GOLGA6L10A0A0M3HER8 536 aa11.32□□□□□ -0.6
CPSF1P1-201ENST00000397477 TTI1O43156 1089 aa11.32□□□□□ -0.6
CPSF1P1-201ENST00000397477 SART1O43290 800 aaKnown RBP11.32□□□□□ -0.6
CPSF1P1-201ENST00000397477 BUB1BO60566 1050 aaPredicted RBP11.32□□□□□ -0.6
CPSF1P1-201ENST00000397477 EGFRP00533 1210 aa11.32□□□□□ -0.6
CPSF1P1-201ENST00000397477 FTLP02792 175 aaPredicted RBP11.32□□□□□ -0.6
CPSF1P1-201ENST00000397477 HNRNPH3P31942 346 aaKnown RBP11.32□□□□□ -0.6
CPSF1P1-201ENST00000397477 YWHABP31946 246 aaKnown RBP11.32□□□□□ -0.6
CPSF1P1-201ENST00000397477 QARSP47897 775 aaKnown RBP11.32□□□□□ -0.6
CPSF1P1-201ENST00000397477 C1orf186Q6ZWK4 172 aa11.32□□□□□ -0.6
CPSF1P1-201ENST00000397477 RTKN2Q8IZC4 609 aa11.32□□□□□ -0.6
CPSF1P1-201ENST00000397477 ATG4CQ96DT6 458 aa11.32□□□□□ -0.6
CPSF1P1-201ENST00000397477 ZIM3Q96PE6 472 aa11.32□□□□□ -0.6
CPSF1P1-201ENST00000397477 HSD17B14Q9BPX1 270 aa11.32□□□□□ -0.6
CPSF1P1-201ENST00000397477 THAP2Q9H0W7 228 aa11.32□□□□□ -0.6
CPSF1P1-201ENST00000397477 TUFT1Q9NNX1 390 aa11.32□□□□□ -0.6
CPSF1P1-201ENST00000397477 DNAJC17Q9NVM6 304 aaKnown RBP11.32□□□□□ -0.6
CPSF1P1-201ENST00000397477 ANKFY1Q9P2R3 1169 aa11.32□□□□□ -0.6
CPSF1P1-201ENST00000397477 TRAF3IP3Q9Y228 551 aa11.32□□□□□ -0.6
CPSF1P1-201ENST00000397477 TARSL2A2RTX5 802 aaKnown RBP11.31□□□□□ -0.6
CPSF1P1-201ENST00000397477 CYP26A1O43174 497 aa11.31□□□□□ -0.6
CPSF1P1-201ENST00000397477 PEX10O60683 326 aa11.31□□□□□ -0.6
CPSF1P1-201ENST00000397477 PSMD10O75832 226 aa11.31□□□□□ -0.6
CPSF1P1-201ENST00000397477 SYF2O95926 243 aaKnown RBP11.31□□□□□ -0.6
CPSF1P1-201ENST00000397477 VAMP7P51809 220 aa11.31□□□□□ -0.6
CPSF1P1-201ENST00000397477 AADACL2Q6P093 401 aa11.31□□□□□ -0.6
CPSF1P1-201ENST00000397477 IRF2BP2Q7Z5L9 587 aa11.31□□□□□ -0.6
CPSF1P1-201ENST00000397477 RPUSD2Q8IZ73 545 aaKnown RBP11.31□□□□□ -0.6
CPSF1P1-201ENST00000397477 MMGT1Q8N4V1 131 aa11.31□□□□□ -0.6
CPSF1P1-201ENST00000397477 CASKIN2Q8WXE0 1202 aa11.31□□□□□ -0.6
CPSF1P1-201ENST00000397477 ACCSQ96QU6 501 aa11.31□□□□□ -0.6
CPSF1P1-201ENST00000397477 TOPORSQ9NS56 1045 aaPredicted RBP11.31□□□□□ -0.6
CPSF1P1-201ENST00000397477 COL20A1Q9P218 1284 aa11.31□□□□□ -0.6
CPSF1P1-201ENST00000397477 GABBR1Q9UBS5 961 aa11.31□□□□□ -0.6
CPSF1P1-201ENST00000397477 ZNRF3Q9ULT6 936 aa11.31□□□□□ -0.6
CPSF1P1-201ENST00000397477 STK24Q9Y6E0 443 aa11.31□□□□□ -0.6
CPSF1P1-201ENST00000397477 LTBP4Q8N2S1 1624 aa11.31□□□□□ -0.6
CPSF1P1-201ENST00000397477 P4HBP07237 508 aaKnown RBP11.31□□□□□ -0.6
CPSF1P1-201ENST00000397477 IVLP07476 585 aa11.31□□□□□ -0.6
CPSF1P1-201ENST00000397477 PLTPP55058 493 aa11.31□□□□□ -0.6
CPSF1P1-201ENST00000397477 PPFIA1Q13136 1202 aa11.31□□□□□ -0.6
CPSF1P1-201ENST00000397477 SNX1Q13596 522 aa11.31□□□□□ -0.6
CPSF1P1-201ENST00000397477 KRT71Q3SY84 523 aa11.31□□□□□ -0.6
CPSF1P1-201ENST00000397477 HYIQ5T013 277 aa11.31□□□□□ -0.6
CPSF1P1-201ENST00000397477 SWSAP1Q6NVH7 229 aa11.31□□□□□ -0.6
CPSF1P1-201ENST00000397477 SEPT14Q6ZU15 432 aa11.31□□□□□ -0.6
CPSF1P1-201ENST00000397477 CCDC50Q8IVM0 306 aa11.31□□□□□ -0.6
CPSF1P1-201ENST00000397477 CCDC26Q8TAB7 109 aa11.31□□□□□ -0.6
CPSF1P1-201ENST00000397477 WRNIP1Q96S55 665 aa11.31□□□□□ -0.6
CPSF1P1-201ENST00000397477 KMT5AQ9NQR1 393 aa11.31□□□□□ -0.6
CPSF1P1-201ENST00000397477 UTP11Q9Y3A2 253 aaKnown RBP11.31□□□□□ -0.6
CPSF1P1-201ENST00000397477 IGLV3-22A0A075B6J6 115 aa11.31□□□□□ -0.6
CPSF1P1-201ENST00000397477 DENND3A2RUS2 1198 aa11.31□□□□□ -0.6
CPSF1P1-201ENST00000397477 PLSCR1O15162 318 aa11.31□□□□□ -0.6
CPSF1P1-201ENST00000397477 NF2P35240 595 aa11.31□□□□□ -0.6
CPSF1P1-201ENST00000397477 BFSP1Q12934 665 aa11.31□□□□□ -0.6
CPSF1P1-201ENST00000397477 SNRNP48Q6IEG0 339 aaKnown RBP11.31□□□□□ -0.6
CPSF1P1-201ENST00000397477 CBWD2Q8IUF1 395 aa11.31□□□□□ -0.6
CPSF1P1-201ENST00000397477 RNF146Q9NTX7 359 aa11.31□□□□□ -0.6
CPSF1P1-201ENST00000397477 AIPL1Q9NZN9 384 aa11.31□□□□□ -0.6
CPSF1P1-201ENST00000397477 PLAAQ9Y263 795 aa11.31□□□□□ -0.6
CPSF1P1-201ENST00000397477 SNX24Q9Y343 169 aa11.31□□□□□ -0.6
CPSF1P1-201ENST00000397477 MYH1P12882 1939 aa11.3□□□□□ -0.6
CPSF1P1-201ENST00000397477 LRRIQ4A6NIV6 560 aa11.3□□□□□ -0.6
CPSF1P1-201ENST00000397477 ATP9AO75110 1047 aa11.3□□□□□ -0.6
CPSF1P1-201ENST00000397477 LMNB1P20700 586 aa11.3□□□□□ -0.6
CPSF1P1-201ENST00000397477 DMP1Q13316 513 aaPredicted RBP11.3□□□□□ -0.6
CPSF1P1-201ENST00000397477 TTLL12Q14166 644 aaPredicted RBP11.3□□□□□ -0.6
CPSF1P1-201ENST00000397477 TRIP13Q15645 432 aaPredicted RBP11.3□□□□□ -0.6
CPSF1P1-201ENST00000397477 MOXD1Q6UVY6 613 aa11.3□□□□□ -0.6
CPSF1P1-201ENST00000397477 DPH6Q7L8W6 267 aa11.3□□□□□ -0.6
CPSF1P1-201ENST00000397477 PALB2Q86YC2 1186 aa11.3□□□□□ -0.6
CPSF1P1-201ENST00000397477 MCF2L2Q86YR7 1114 aa11.3□□□□□ -0.6
CPSF1P1-201ENST00000397477 XXYLT1Q8NBI6 393 aa11.3□□□□□ -0.6
CPSF1P1-201ENST00000397477 TPCN2Q8NHX9 752 aa11.3□□□□□ -0.6
CPSF1P1-201ENST00000397477 GLG1Q92896 1179 aa11.3□□□□□ -0.6
CPSF1P1-201ENST00000397477 FNBP1Q96RU3 617 aa11.3□□□□□ -0.6
CPSF1P1-201ENST00000397477 SELENOSQ9BQE4 189 aa11.3□□□□□ -0.6
CPSF1P1-201ENST00000397477 PAGR1Q9BTK6 254 aa11.3□□□□□ -0.6
CPSF1P1-201ENST00000397477 MYOZ2Q9NPC6 264 aa11.3□□□□□ -0.6
CPSF1P1-201ENST00000397477 HSPBP1Q9NZL4 362 aa11.3□□□□□ -0.6
CPSF1P1-201ENST00000397477 GUCY1A3Q02108 690 aa11.3□□□□□ -0.6
CPSF1P1-201ENST00000397477 DHX9Q08211 1270 aaKnown RBP11.3□□□□□ -0.6
CPSF1P1-201ENST00000397477 COBLL1Q53SF7 1204 aa11.3□□□□□ -0.6
CPSF1P1-201ENST00000397477 MEI1Q5TIA1 1274 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms