RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 BMPR1AP36894 532 aa16.22■□□□□ 0.19
SEC13-208ENST00000397109 FXR2P51116 673 aaKnown RBP eCLIP16.22■□□□□ 0.19
SEC13-208ENST00000397109 PTGDRQ13258 359 aa16.22■□□□□ 0.19
SEC13-208ENST00000397109 PDIA5Q14554 519 aa16.22■□□□□ 0.19
SEC13-208ENST00000397109 MXD4Q14582 209 aaPredicted RBP16.22■□□□□ 0.19
SEC13-208ENST00000397109 HAUS3Q68CZ6 603 aa16.22■□□□□ 0.19
SEC13-208ENST00000397109 CATSPER3Q86XQ3 398 aa16.22■□□□□ 0.19
SEC13-208ENST00000397109 PRPF31Q8WWY3 499 aaKnown RBP16.22■□□□□ 0.19
SEC13-208ENST00000397109 TMEM143Q96AN5 459 aa16.22■□□□□ 0.19
SEC13-208ENST00000397109 NLRP4Q96MN2 994 aa16.22■□□□□ 0.19
SEC13-208ENST00000397109 NACC1Q96RE7 527 aa16.22■□□□□ 0.19
SEC13-208ENST00000397109 ATP6V0A4Q9HBG4 840 aa16.22■□□□□ 0.19
SEC13-208ENST00000397109 PCDHB6Q9Y5E3 794 aa16.22■□□□□ 0.19
SEC13-208ENST00000397109 RALGAPA2Q2PPJ7 1873 aa16.21■□□□□ 0.19
SEC13-208ENST00000397109 C5orf67F2Z3F1 127 aa16.21■□□□□ 0.19
SEC13-208ENST00000397109 HOXA2O43364 376 aa16.21■□□□□ 0.19
SEC13-208ENST00000397109 IBSPP21815 317 aaPredicted RBP16.21■□□□□ 0.19
SEC13-208ENST00000397109 CTNNB1P35222 781 aa16.21■□□□□ 0.19
SEC13-208ENST00000397109 PRPHP41219 470 aa16.21■□□□□ 0.19
SEC13-208ENST00000397109 RARRES1P49788 294 aa16.21■□□□□ 0.19
SEC13-208ENST00000397109 LAMTOR4Q0VGL1 99 aa16.21■□□□□ 0.19
SEC13-208ENST00000397109 GPM6BQ13491 265 aa16.21■□□□□ 0.19
SEC13-208ENST00000397109 PTPROQ16827 1216 aa16.21■□□□□ 0.19
SEC13-208ENST00000397109 SRGAP1Q7Z6B7 1085 aa16.21■□□□□ 0.19
SEC13-208ENST00000397109 FERMT3Q86UX7 667 aa16.21■□□□□ 0.19
SEC13-208ENST00000397109 KSR1Q8IVT5 923 aa16.21■□□□□ 0.19
SEC13-208ENST00000397109 PIGOQ8TEQ8 1089 aa16.21■□□□□ 0.19
SEC13-208ENST00000397109 PLVAPQ9BX97 442 aa16.21■□□□□ 0.19
SEC13-208ENST00000397109 DBR1Q9UK59 544 aaKnown RBP16.21■□□□□ 0.19
SEC13-208ENST00000397109 NLRC5Q86WI3 1866 aa16.2■□□□□ 0.18
SEC13-208ENST00000397109 MED24O75448 989 aa16.2■□□□□ 0.18
SEC13-208ENST00000397109 FGFR4P22455 802 aa16.2■□□□□ 0.18
SEC13-208ENST00000397109 MCM4P33991 863 aa16.2■□□□□ 0.18
SEC13-208ENST00000397109 CATSPER4Q7RTX7 472 aa16.2■□□□□ 0.18
SEC13-208ENST00000397109 C11orf84Q9BUA3 381 aaPredicted RBP16.2■□□□□ 0.18
SEC13-208ENST00000397109 IFT122Q9HBG6 1241 aa16.2■□□□□ 0.18
SEC13-208ENST00000397109 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.2■□□□□ 0.18
SEC13-208ENST00000397109 FOXD4L1Q9NU39 408 aa16.2■□□□□ 0.18
SEC13-208ENST00000397109 LRWD1Q9UFC0 647 aa16.2■□□□□ 0.18
SEC13-208ENST00000397109 ARID2Q68CP9 1835 aa16.19■□□□□ 0.18
SEC13-208ENST00000397109 A0A0U1RQF3 1178 aa16.19■□□□□ 0.18
SEC13-208ENST00000397109 CSDE1O75534 798 aaKnown RBP16.19■□□□□ 0.18
SEC13-208ENST00000397109 EOMESO95936 686 aa16.19■□□□□ 0.18
SEC13-208ENST00000397109 LINC00271P0C7V0 271 aa16.19■□□□□ 0.18
SEC13-208ENST00000397109 SRGAP2CP0DJJ0 459 aa16.19■□□□□ 0.18
SEC13-208ENST00000397109 SKIP12755 728 aa16.19■□□□□ 0.18
SEC13-208ENST00000397109 SYT1P21579 422 aa16.19■□□□□ 0.18
SEC13-208ENST00000397109 POU5F1BQ06416 359 aa16.19■□□□□ 0.18
SEC13-208ENST00000397109 TFDP1Q14186 410 aa16.19■□□□□ 0.18
SEC13-208ENST00000397109 PAN2Q504Q3 1202 aaKnown RBP16.19■□□□□ 0.18
SEC13-208ENST00000397109 NAALADL2Q58DX5 795 aa16.19■□□□□ 0.18
SEC13-208ENST00000397109 ECHDC2Q86YB7 292 aa16.19■□□□□ 0.18
SEC13-208ENST00000397109 MRPL38Q96DV4 380 aaKnown RBP16.19■□□□□ 0.18
SEC13-208ENST00000397109 TRAIPQ9BWF2 469 aa16.19■□□□□ 0.18
SEC13-208ENST00000397109 XPNPEP1Q9NQW7 623 aa16.19■□□□□ 0.18
SEC13-208ENST00000397109 BMP2KQ9NSY1 1161 aaPredicted RBP16.19■□□□□ 0.18
SEC13-208ENST00000397109 THEGQ9P2T0 379 aa16.19■□□□□ 0.18
SEC13-208ENST00000397109 MRPL42Q9Y6G3 142 aaKnown RBP16.19■□□□□ 0.18
SEC13-208ENST00000397109 COL4A4P53420 1690 aaPredicted RBP16.19■□□□□ 0.18
SEC13-208ENST00000397109 PRUNE2Q8WUY3 3088 aa16.19■□□□□ 0.18
SEC13-208ENST00000397109 TBKBP1A7MCY6 615 aa16.18■□□□□ 0.18
SEC13-208ENST00000397109 CCT6AP40227 531 aaKnown RBP16.18■□□□□ 0.18
SEC13-208ENST00000397109 PHKA2P46019 1235 aa16.18■□□□□ 0.18
SEC13-208ENST00000397109 PCBP1Q15365 356 aaKnown RBP eCLIP16.18■□□□□ 0.18
SEC13-208ENST00000397109 SKIV2LQ15477 1246 aaKnown RBP16.18■□□□□ 0.18
SEC13-208ENST00000397109 DTHD1Q6ZMT9 781 aa16.18■□□□□ 0.18
SEC13-208ENST00000397109 IGSF22Q8N9C0 903 aa16.18■□□□□ 0.18
SEC13-208ENST00000397109 RNF149Q8NC42 400 aa16.18■□□□□ 0.18
SEC13-208ENST00000397109 MCPH1Q8NEM0 835 aa16.18■□□□□ 0.18
SEC13-208ENST00000397109 ATXN2LQ8WWM7 1075 aaKnown RBP16.18■□□□□ 0.18
SEC13-208ENST00000397109 RSPH1Q8WYR4 309 aa16.18■□□□□ 0.18
SEC13-208ENST00000397109 P2RX5Q93086 422 aa16.18■□□□□ 0.18
SEC13-208ENST00000397109 TMEM117Q9H0C3 514 aa16.18■□□□□ 0.18
SEC13-208ENST00000397109 LMAN2LQ9H0V9 348 aa16.18■□□□□ 0.18
SEC13-208ENST00000397109 AAASQ9NRG9 546 aa16.18■□□□□ 0.18
SEC13-208ENST00000397109 ARL2P36404 184 aa16.17■□□□□ 0.18
SEC13-208ENST00000397109 GATMP50440 423 aa16.17■□□□□ 0.18
SEC13-208ENST00000397109 FAM102BQ5T8I3 360 aa16.17■□□□□ 0.18
SEC13-208ENST00000397109 TWF2Q6IBS0 349 aaKnown RBP16.17■□□□□ 0.18
SEC13-208ENST00000397109 POTEGQ6S5H5 508 aa16.17■□□□□ 0.18
SEC13-208ENST00000397109 BRAPQ7Z569 592 aa16.17■□□□□ 0.18
SEC13-208ENST00000397109 ABI1Q8IZP0 508 aa16.17■□□□□ 0.18
SEC13-208ENST00000397109 COG5Q9UP83 839 aa16.17■□□□□ 0.18
SEC13-208ENST00000397109 PIN4Q9Y237 131 aaKnown RBP16.17■□□□□ 0.18
SEC13-208ENST00000397109 FNDC1Q4ZHG4 1894 aaPredicted RBP16.17■□□□□ 0.18
SEC13-208ENST00000397109 MYO7AQ13402 2215 aa16.17■□□□□ 0.18
SEC13-208ENST00000397109 A0A0C4DFX4 3053 aa16.16■□□□□ 0.18
SEC13-208ENST00000397109 ARHGEF35A5YM69 484 aa16.16■□□□□ 0.18
SEC13-208ENST00000397109 GOLGA6L22H0YM25 854 aa16.16■□□□□ 0.18
SEC13-208ENST00000397109 STX6O43752 255 aa16.16■□□□□ 0.18
SEC13-208ENST00000397109 USO1O60763 962 aaKnown RBP16.16■□□□□ 0.18
SEC13-208ENST00000397109 FGFR1P11362 822 aa16.16■□□□□ 0.18
SEC13-208ENST00000397109 RAB27AP51159 221 aa16.16■□□□□ 0.18
SEC13-208ENST00000397109 PTENP60484 403 aa16.16■□□□□ 0.18
SEC13-208ENST00000397109 ATP2C1P98194 919 aaPredicted RBP16.16■□□□□ 0.18
SEC13-208ENST00000397109 NCBP1Q09161 790 aaKnown RBP16.16■□□□□ 0.18
SEC13-208ENST00000397109 TIGD5Q53EQ6 642 aa16.16■□□□□ 0.18
SEC13-208ENST00000397109 SPOUT1Q5T280 376 aaKnown RBP16.16■□□□□ 0.18
SEC13-208ENST00000397109 KRT79Q5XKE5 535 aa16.16■□□□□ 0.18
SEC13-208ENST00000397109 ZNF598Q86UK7 904 aaKnown RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms