RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 PLTPP55058 493 aa15.11■□□□□ 0.01
NUP98-204ENST00000397004 XRCC4Q13426 336 aa15.11■□□□□ 0.01
NUP98-204ENST00000397004 PRPF4BQ13523 1007 aaKnown RBP15.11■□□□□ 0.01
NUP98-204ENST00000397004 CNBD1Q8NA66 436 aa15.11■□□□□ 0.01
NUP98-204ENST00000397004 ZSWIM2Q8NEG5 633 aa15.11■□□□□ 0.01
NUP98-204ENST00000397004 GGA1Q9UJY5 639 aa15.11■□□□□ 0.01
NUP98-204ENST00000397004 DNAJC12Q9UKB3 198 aa15.11■□□□□ 0.01
NUP98-204ENST00000397004 AGAP1Q9UPQ3 857 aa15.11■□□□□ 0.01
NUP98-204ENST00000397004 MPHOSPH10O00566 681 aaKnown RBP15.1■□□□□ 0.01
NUP98-204ENST00000397004 RAD21O60216 631 aa15.1■□□□□ 0.01
NUP98-204ENST00000397004 RPL21P46778 160 aaKnown RBP15.1■□□□□ 0.01
NUP98-204ENST00000397004 DLG4P78352 724 aa15.1■□□□□ 0.01
NUP98-204ENST00000397004 DR1Q01658 176 aa15.1■□□□□ 0.01
NUP98-204ENST00000397004 JAMLQ86YT9 394 aa15.1■□□□□ 0.01
NUP98-204ENST00000397004 PARP9Q8IXQ6 854 aa15.1■□□□□ 0.01
NUP98-204ENST00000397004 EPS8L3Q8TE67 593 aaKnown RBP15.1■□□□□ 0.01
NUP98-204ENST00000397004 UTRNP46939 3433 aa15.1■□□□□ 0.01
NUP98-204ENST00000397004 SMIM23A6NLE4 172 aa15.1■□□□□ 0.01
NUP98-204ENST00000397004 TISP43B9A030 160 aa15.1■□□□□ 0.01
NUP98-204ENST00000397004 CTTNQ14247 550 aaKnown RBP15.1■□□□□ 0.01
NUP98-204ENST00000397004 POP1Q99575 1024 aaKnown RBP15.1■□□□□ 0.01
NUP98-204ENST00000397004 KCNQ5Q9NR82 932 aa15.1■□□□□ 0.01
NUP98-204ENST00000397004 CCNL1Q9UK58 526 aaPredicted RBP15.1■□□□□ 0.01
NUP98-204ENST00000397004 AMFRQ9UKV5 643 aa15.1■□□□□ 0.01
NUP98-204ENST00000397004 INTUQ9ULD6 942 aa15.1■□□□□ 0.01
NUP98-204ENST00000397004 DNM3Q9UQ16 869 aa15.1■□□□□ 0.01
NUP98-204ENST00000397004 UTP11Q9Y3A2 253 aaKnown RBP15.1■□□□□ 0.01
NUP98-204ENST00000397004 FOXN3O00409 490 aaPredicted RBP15.1■□□□□ 0.01
NUP98-204ENST00000397004 RIMBP2O15034 1052 aa15.1■□□□□ 0.01
NUP98-204ENST00000397004 CTNND1O60716 968 aaKnown RBP15.1■□□□□ 0.01
NUP98-204ENST00000397004 EEF2P13639 858 aaKnown RBP15.1■□□□□ 0.01
NUP98-204ENST00000397004 CDC42EP5Q6NZY7 148 aa15.1■□□□□ 0.01
NUP98-204ENST00000397004 PIGWQ7Z7B1 504 aa15.1■□□□□ 0.01
NUP98-204ENST00000397004 LRRC34Q8IZ02 419 aa15.1■□□□□ 0.01
NUP98-204ENST00000397004 C3orf20Q8ND61 904 aa15.1■□□□□ 0.01
NUP98-204ENST00000397004 RFFLQ8WZ73 363 aa15.1■□□□□ 0.01
NUP98-204ENST00000397004 HVCN1Q96D96 273 aa15.1■□□□□ 0.01
NUP98-204ENST00000397004 CHMP6Q96FZ7 201 aa15.1■□□□□ 0.01
NUP98-204ENST00000397004 SGSM3Q96HU1 749 aa15.1■□□□□ 0.01
NUP98-204ENST00000397004 RBBP6Q7Z6E9 1792 aaKnown RBP15.09■□□□□ 0.01
NUP98-204ENST00000397004 NUDT17P0C025 328 aa15.09■□□□□ 0.01
NUP98-204ENST00000397004 TMEM253P0C7T8 217 aa15.09■□□□□ 0.01
NUP98-204ENST00000397004 FMO5P49326 533 aa15.09■□□□□ 0.01
NUP98-204ENST00000397004 DRP2Q13474 957 aa15.09■□□□□ 0.01
NUP98-204ENST00000397004 USH1GQ495M9 461 aa15.09■□□□□ 0.01
NUP98-204ENST00000397004 APOBEC3HQ6NTF7 200 aaKnown RBP15.09■□□□□ 0.01
NUP98-204ENST00000397004 CACNA2D3Q8IZS8 1091 aa15.09■□□□□ 0.01
NUP98-204ENST00000397004 EIF2AK1Q9BQI3 630 aaKnown RBP15.09■□□□□ 0.01
NUP98-204ENST00000397004 AZI2Q9H6S1 392 aa15.09■□□□□ 0.01
NUP98-204ENST00000397004 GGT7Q9UJ14 662 aa15.09■□□□□ 0.01
NUP98-204ENST00000397004 ACCSLQ4AC99 568 aa15.09■□□□□ 0.01
NUP98-204ENST00000397004 TNFAIP8L3Q5GJ75 292 aa15.09■□□□□ 0.01
NUP98-204ENST00000397004 GPATCH4Q5T3I0 446 aaKnown RBP15.09■□□□□ 0.01
NUP98-204ENST00000397004 AEBP2Q6ZN18 517 aaPredicted RBP15.09■□□□□ 0.01
NUP98-204ENST00000397004 PABPC3Q9H361 631 aaKnown RBP15.09■□□□□ 0.01
NUP98-204ENST00000397004 LRRC4BQ9NT99 713 aa15.09■□□□□ 0.01
NUP98-204ENST00000397004 ATP8B3O60423 1300 aa15.09■□□□□ 0.01
NUP98-204ENST00000397004 MGRN1O60291 552 aa15.09■□□□□ 0.01
NUP98-204ENST00000397004 SLCO1A2P46721 670 aa15.09■□□□□ 0.01
NUP98-204ENST00000397004 Q4G0T1 1027 aa15.09■□□□□ 0.01
NUP98-204ENST00000397004 CCDC38Q502W7 563 aa15.09■□□□□ 0.01
NUP98-204ENST00000397004 CCDC26Q8TAB7 109 aa15.09■□□□□ 0.01
NUP98-204ENST00000397004 HSD17B14Q9BPX1 270 aa15.09■□□□□ 0.01
NUP98-204ENST00000397004 ALG6Q9Y672 507 aa15.09■□□□□ 0.01
NUP98-204ENST00000397004 GOLGA6L7A0A1B0GV03 622 aa15.08■□□□□ 0.01
NUP98-204ENST00000397004 SLC16A3O15427 465 aaKnown RBP15.08■□□□□ 0.01
NUP98-204ENST00000397004 FGFR4P22455 802 aa15.08■□□□□ 0.01
NUP98-204ENST00000397004 PMS2P54278 862 aa15.08■□□□□ 0.01
NUP98-204ENST00000397004 ELF3P78545 371 aaPredicted RBP15.08■□□□□ 0.01
NUP98-204ENST00000397004 MTMR3Q13615 1198 aa15.08■□□□□ 0.01
NUP98-204ENST00000397004 LLGL1Q15334 1064 aa15.08■□□□□ 0.01
NUP98-204ENST00000397004 IFI16Q16666 785 aaKnown RBP15.08■□□□□ 0.01
NUP98-204ENST00000397004 C1orf186Q6ZWK4 172 aa15.08■□□□□ 0.01
NUP98-204ENST00000397004 SH3BP5LQ7L8J4 393 aa15.08■□□□□ 0.01
NUP98-204ENST00000397004 WDR18Q9BV38 432 aa15.08■□□□□ 0.01
NUP98-204ENST00000397004 STK33Q9BYT3 514 aa15.08■□□□□ 0.01
NUP98-204ENST00000397004 FAM114A2Q9NRY5 505 aa15.08■□□□□ 0.01
NUP98-204ENST00000397004 USP40Q9NVE5 1235 aa15.08■□□□□ 0.01
NUP98-204ENST00000397004 IGLV3-22A0A075B6J6 115 aa15.08■□□□□ 0
NUP98-204ENST00000397004 GTPBP10A4D1E9 387 aaKnown RBP15.08■□□□□ 0
NUP98-204ENST00000397004 CALUO43852 315 aaPredicted RBP15.08■□□□□ 0
NUP98-204ENST00000397004 SLITRK3O94933 977 aa15.08■□□□□ 0
NUP98-204ENST00000397004 MAPK7Q13164 816 aa15.08■□□□□ 0
NUP98-204ENST00000397004 KIAA1755Q5JYT7 1200 aa15.08■□□□□ 0
NUP98-204ENST00000397004 KAT5Q92993 513 aa15.08■□□□□ 0
NUP98-204ENST00000397004 PRMT1Q99873 361 aaKnown RBP15.08■□□□□ 0
NUP98-204ENST00000397004 TLDC2A0PJX2 215 aa15.08■□□□□ 0
NUP98-204ENST00000397004 DDTLA6NHG4 134 aaPredicted RBP15.08■□□□□ 0
NUP98-204ENST00000397004 MMEP08473 750 aa15.08■□□□□ 0
NUP98-204ENST00000397004 ATP2B4P23634 1241 aa15.08■□□□□ 0
NUP98-204ENST00000397004 STAT1P42224 750 aa15.08■□□□□ 0
NUP98-204ENST00000397004 E2F5Q15329 346 aa15.08■□□□□ 0
NUP98-204ENST00000397004 ZNF568Q3ZCX4 644 aa15.08■□□□□ 0
NUP98-204ENST00000397004 FAM186BQ8IYM0 893 aa15.08■□□□□ 0
NUP98-204ENST00000397004 KIRREL3Q8IZU9 778 aa15.08■□□□□ 0
NUP98-204ENST00000397004 DBR1Q9UK59 544 aaKnown RBP15.08■□□□□ 0
NUP98-204ENST00000397004 SLC12A4Q9UP95 1085 aa15.08■□□□□ 0
NUP98-204ENST00000397004 ATMINO43313 823 aaPredicted RBP15.07■□□□□ 0
NUP98-204ENST00000397004 FERP16591 822 aa15.07■□□□□ 0
NUP98-204ENST00000397004 PEX5P50542 639 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms