RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 TCP11X2Q5H9J9 407 aa22.46■■□□□ 1.19
VCPKMT-202ENST00000395860 EFCAB12Q6NXP0 572 aa22.46■■□□□ 1.19
VCPKMT-202ENST00000395860 TMEM161BQ8NDZ6 487 aa22.46■■□□□ 1.19
VCPKMT-202ENST00000395860 KAT2BQ92831 832 aa22.46■■□□□ 1.19
VCPKMT-202ENST00000395860 EEF2KMTQ96G04 330 aa22.46■■□□□ 1.19
VCPKMT-202ENST00000395860 ACCSQ96QU6 501 aa22.46■■□□□ 1.19
VCPKMT-202ENST00000395860 UPF3AQ9H1J1 476 aaKnown RBP22.46■■□□□ 1.19
VCPKMT-202ENST00000395860 TMEM206Q9H813 350 aa22.46■■□□□ 1.19
VCPKMT-202ENST00000395860 WBP1LQ9NX94 342 aa22.46■■□□□ 1.19
VCPKMT-202ENST00000395860 MYADML2A6NDP7 307 aa22.45■■□□□ 1.19
VCPKMT-202ENST00000395860 H0YCG3 227 aa22.45■■□□□ 1.19
VCPKMT-202ENST00000395860 MAGEB2O15479 319 aa22.45■■□□□ 1.19
VCPKMT-202ENST00000395860 CBFA2T2O43439 604 aa22.45■■□□□ 1.19
VCPKMT-202ENST00000395860 KPNA6O60684 536 aa22.45■■□□□ 1.19
VCPKMT-202ENST00000395860 PGK1P00558 417 aa22.45■■□□□ 1.19
VCPKMT-202ENST00000395860 KLRC1P26715 233 aa22.45■■□□□ 1.19
VCPKMT-202ENST00000395860 NAMPTP43490 491 aa22.45■■□□□ 1.19
VCPKMT-202ENST00000395860 DRP2Q13474 957 aa22.45■■□□□ 1.19
VCPKMT-202ENST00000395860 GRIK4Q16099 956 aa22.45■■□□□ 1.19
VCPKMT-202ENST00000395860 GNASQ5JWF2 1037 aa22.45■■□□□ 1.19
VCPKMT-202ENST00000395860 IRF2BP1Q8IU81 584 aa22.45■■□□□ 1.19
VCPKMT-202ENST00000395860 METTL13Q8N6R0 699 aa22.45■■□□□ 1.19
VCPKMT-202ENST00000395860 PSPC1Q8WXF1 523 aaKnown RBP22.45■■□□□ 1.19
VCPKMT-202ENST00000395860 HVCN1Q96D96 273 aa22.45■■□□□ 1.19
VCPKMT-202ENST00000395860 PDLIM2Q96JY6 352 aa22.45■■□□□ 1.19
VCPKMT-202ENST00000395860 KATNAL1Q9BW62 490 aa22.45■■□□□ 1.19
VCPKMT-202ENST00000395860 XPO4Q9C0E2 1151 aaKnown RBP22.45■■□□□ 1.19
VCPKMT-202ENST00000395860 XPNPEP3Q9NQH7 507 aa22.45■■□□□ 1.19
VCPKMT-202ENST00000395860 SIP14410 1827 aa22.45■■□□□ 1.18
VCPKMT-202ENST00000395860 DENND3A2RUS2 1198 aa22.45■■□□□ 1.18
VCPKMT-202ENST00000395860 LRRIQ4A6NIV6 560 aa22.45■■□□□ 1.18
VCPKMT-202ENST00000395860 EEF1GP26641 437 aaKnown RBP22.45■■□□□ 1.18
VCPKMT-202ENST00000395860 PSEN2P49810 448 aa22.45■■□□□ 1.18
VCPKMT-202ENST00000395860 DNM2P50570 870 aa22.45■■□□□ 1.18
VCPKMT-202ENST00000395860 MKRN4PQ13434 485 aaPredicted RBP22.45■■□□□ 1.18
VCPKMT-202ENST00000395860 LRRC55Q6ZSA7 311 aa22.45■■□□□ 1.18
VCPKMT-202ENST00000395860 DEPTORQ8TB45 409 aa22.45■■□□□ 1.18
VCPKMT-202ENST00000395860 PRPF31Q8WWY3 499 aaKnown RBP22.45■■□□□ 1.18
VCPKMT-202ENST00000395860 MRFAP1L1Q96HT8 127 aa22.45■■□□□ 1.18
VCPKMT-202ENST00000395860 CTAGE1Q96RT6 745 aa22.45■■□□□ 1.18
VCPKMT-202ENST00000395860 PPP1R9BQ96SB3 815 aa22.45■■□□□ 1.18
VCPKMT-202ENST00000395860 GBP3Q9H0R5 595 aa22.45■■□□□ 1.18
VCPKMT-202ENST00000395860 PCNTO95613 3336 aa22.44■■□□□ 1.18
VCPKMT-202ENST00000395860 TGFB1I1O43294 461 aa22.44■■□□□ 1.18
VCPKMT-202ENST00000395860 ZEB2O60315 1214 aa22.44■■□□□ 1.18
VCPKMT-202ENST00000395860 INHAP05111 366 aa22.44■■□□□ 1.18
VCPKMT-202ENST00000395860 GRK4P32298 578 aa22.44■■□□□ 1.18
VCPKMT-202ENST00000395860 ABCD1P33897 745 aa22.44■■□□□ 1.18
VCPKMT-202ENST00000395860 PURAQ00577 322 aaKnown RBP22.44■■□□□ 1.18
VCPKMT-202ENST00000395860 MXD4Q14582 209 aaPredicted RBP22.44■■□□□ 1.18
VCPKMT-202ENST00000395860 HS2ST1Q7LGA3 356 aa22.44■■□□□ 1.18
VCPKMT-202ENST00000395860 CNOT6LQ96LI5 555 aaKnown RBP22.44■■□□□ 1.18
VCPKMT-202ENST00000395860 SUCLA2Q9P2R7 463 aaPredicted RBP22.44■■□□□ 1.18
VCPKMT-202ENST00000395860 LIMA1Q9UHB6 759 aaKnown RBP22.44■■□□□ 1.18
VCPKMT-202ENST00000395860 TBX20Q9UMR3 447 aa22.44■■□□□ 1.18
VCPKMT-202ENST00000395860 EXOC7Q9UPT5 735 aa22.44■■□□□ 1.18
VCPKMT-202ENST00000395860 PTCH2Q9Y6C5 1203 aa22.44■■□□□ 1.18
VCPKMT-202ENST00000395860 ADGRA3Q8IWK6 1321 aa22.44■■□□□ 1.18
VCPKMT-202ENST00000395860 RRN3P2A6NIE6 340 aa22.43■■□□□ 1.18
VCPKMT-202ENST00000395860 SMIM10L2AP0DMW4 78 aa22.43■■□□□ 1.18
VCPKMT-202ENST00000395860 SMIM10L2BP0DMW5 78 aa22.43■■□□□ 1.18
VCPKMT-202ENST00000395860 NR2F2P24468 414 aa22.43■■□□□ 1.18
VCPKMT-202ENST00000395860 NKX3-2P78367 333 aa22.43■■□□□ 1.18
VCPKMT-202ENST00000395860 ADAM9Q13443 819 aa22.43■■□□□ 1.18
VCPKMT-202ENST00000395860 KRT31Q15323 416 aa22.43■■□□□ 1.18
VCPKMT-202ENST00000395860 MTHFD1LQ6UB35 978 aa22.43■■□□□ 1.18
VCPKMT-202ENST00000395860 ZBTB10Q96DT7 871 aa22.43■■□□□ 1.18
VCPKMT-202ENST00000395860 CEP63Q96MT8 703 aa22.43■■□□□ 1.18
VCPKMT-202ENST00000395860 NAP1L5Q96NT1 182 aaPredicted RBP22.43■■□□□ 1.18
VCPKMT-202ENST00000395860 ARHGAP28Q9P2N2 729 aa22.43■■□□□ 1.18
VCPKMT-202ENST00000395860 DDX20Q9UHI6 824 aaKnown RBP22.43■■□□□ 1.18
VCPKMT-202ENST00000395860 HAS3O00219 553 aa22.43■■□□□ 1.18
VCPKMT-202ENST00000395860 CETN3O15182 167 aa22.43■■□□□ 1.18
VCPKMT-202ENST00000395860 TPM3P06753 285 aa22.43■■□□□ 1.18
VCPKMT-202ENST00000395860 RPL13P26373 211 aaKnown RBP22.43■■□□□ 1.18
VCPKMT-202ENST00000395860 CLCN3P51790 818 aa22.43■■□□□ 1.18
VCPKMT-202ENST00000395860 CAPSQ13938 189 aa22.43■■□□□ 1.18
VCPKMT-202ENST00000395860 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.43■■□□□ 1.18
VCPKMT-202ENST00000395860 GOLGA5Q8TBA6 731 aa22.43■■□□□ 1.18
VCPKMT-202ENST00000395860 IKZF4Q9H2S9 585 aa22.43■■□□□ 1.18
VCPKMT-202ENST00000395860 SETD4Q9NVD3 440 aa22.43■■□□□ 1.18
VCPKMT-202ENST00000395860 NRCAMQ92823 1304 aa22.42■■□□□ 1.18
VCPKMT-202ENST00000395860 CLIC2O15247 247 aa22.42■■□□□ 1.18
VCPKMT-202ENST00000395860 ADAMTS4O75173 837 aa22.42■■□□□ 1.18
VCPKMT-202ENST00000395860 NR3C1P04150 777 aa22.42■■□□□ 1.18
VCPKMT-202ENST00000395860 SCP2P22307 547 aa22.42■■□□□ 1.18
VCPKMT-202ENST00000395860 TMOD1P28289 359 aa22.42■■□□□ 1.18
VCPKMT-202ENST00000395860 LAMTOR4Q0VGL1 99 aa22.42■■□□□ 1.18
VCPKMT-202ENST00000395860 FILIP1LQ4L180 1135 aa22.42■■□□□ 1.18
VCPKMT-202ENST00000395860 RHPN2Q8IUC4 686 aa22.42■■□□□ 1.18
VCPKMT-202ENST00000395860 ZC3H3Q8IXZ2 948 aaKnown RBP22.42■■□□□ 1.18
VCPKMT-202ENST00000395860 DRC7Q8IY82 874 aa22.42■■□□□ 1.18
VCPKMT-202ENST00000395860 MTG1Q9BT17 334 aaPredicted RBP22.42■■□□□ 1.18
VCPKMT-202ENST00000395860 FRMPD3Q5JV73 1810 aa22.42■■□□□ 1.18
VCPKMT-202ENST00000395860 MARCH8Q5T0T0 291 aa22.41■■□□□ 1.18
VCPKMT-202ENST00000395860 APTXQ7Z2E3 356 aaKnown RBP22.41■■□□□ 1.18
VCPKMT-202ENST00000395860 FILIP1Q7Z7B0 1213 aa22.41■■□□□ 1.18
VCPKMT-202ENST00000395860 MAP4K3Q8IVH8 894 aa22.41■■□□□ 1.18
VCPKMT-202ENST00000395860 LMBR1Q8WVP7 490 aa22.41■■□□□ 1.18
VCPKMT-202ENST00000395860 HMX1Q9NP08 348 aaPredicted RBP22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms