RNA–Protein interactions for RNA: ENST00000395667.7

CDRT1-203, CMT1A duplicated region transcript 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CDRT1, Length 3,016 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-203ENST00000395667 RFFLQ8WZ73 363 aa10.04□□□□□ -0.8
CDRT1-203ENST00000395667 CALR3Q96L12 384 aaKnown RBP10.04□□□□□ -0.8
CDRT1-203ENST00000395667 ZNF341Q9BYN7 854 aa10.04□□□□□ -0.8
CDRT1-203ENST00000395667 HOMER2Q9NSB8 354 aa10.04□□□□□ -0.8
CDRT1-203ENST00000395667 BCS1LQ9Y276 419 aa10.04□□□□□ -0.8
CDRT1-203ENST00000395667 BUB1BO60566 1050 aaPredicted RBP10.03□□□□□ -0.8
CDRT1-203ENST00000395667 PLA2G6O60733 806 aa10.03□□□□□ -0.8
CDRT1-203ENST00000395667 SHOX2O60902 331 aaPredicted RBP10.03□□□□□ -0.8
CDRT1-203ENST00000395667 P4HBP07237 508 aaKnown RBP10.03□□□□□ -0.8
CDRT1-203ENST00000395667 NPEPPSP55786 919 aa10.03□□□□□ -0.8
CDRT1-203ENST00000395667 SLFN11Q7Z7L1 901 aa10.03□□□□□ -0.8
CDRT1-203ENST00000395667 NT5DC3Q86UY8 548 aa10.03□□□□□ -0.8
CDRT1-203ENST00000395667 C10orf67Q8IYJ2 551 aa10.03□□□□□ -0.8
CDRT1-203ENST00000395667 IQCKQ8N0W5 287 aa10.03□□□□□ -0.8
CDRT1-203ENST00000395667 DAW1Q8N136 415 aa10.03□□□□□ -0.8
CDRT1-203ENST00000395667 SH2D3CQ8N5H7 860 aa10.03□□□□□ -0.8
CDRT1-203ENST00000395667 SLC30A5Q8TAD4 765 aa10.03□□□□□ -0.8
CDRT1-203ENST00000395667 ISCUQ9H1K1 167 aa10.03□□□□□ -0.8
CDRT1-203ENST00000395667 RABEP2Q9H5N1 569 aa10.03□□□□□ -0.8
CDRT1-203ENST00000395667 ATP8B3O60423 1300 aa10.03□□□□□ -0.8
CDRT1-203ENST00000395667 CCDC188H7C350 402 aa10.03□□□□□ -0.8
CDRT1-203ENST00000395667 NFIBO00712 420 aa10.03□□□□□ -0.8
CDRT1-203ENST00000395667 ICAM1P05362 532 aa10.03□□□□□ -0.8
CDRT1-203ENST00000395667 ASNSP08243 561 aa10.03□□□□□ -0.8
CDRT1-203ENST00000395667 TMEM253P0C7T8 217 aa10.03□□□□□ -0.8
CDRT1-203ENST00000395667 BCRP11274 1271 aa10.03□□□□□ -0.8
CDRT1-203ENST00000395667 ALAS1P13196 640 aa10.03□□□□□ -0.8
CDRT1-203ENST00000395667 INPP5BP32019 993 aa10.03□□□□□ -0.8
CDRT1-203ENST00000395667 MAPK7Q13164 816 aa10.03□□□□□ -0.8
CDRT1-203ENST00000395667 CUL1Q13616 776 aa10.03□□□□□ -0.8
CDRT1-203ENST00000395667 DDX42Q86XP3 938 aaKnown RBP eCLIP10.03□□□□□ -0.8
CDRT1-203ENST00000395667 MREGQ8N565 214 aa10.03□□□□□ -0.8
CDRT1-203ENST00000395667 IL31RAQ8NI17 732 aa10.03□□□□□ -0.8
CDRT1-203ENST00000395667 SH2D3AQ9BRG2 576 aa10.03□□□□□ -0.8
CDRT1-203ENST00000395667 TCEAL9Q9UHQ7 104 aa10.03□□□□□ -0.8
CDRT1-203ENST00000395667 EMSYQ7Z589 1322 aa10.03□□□□□ -0.8
CDRT1-203ENST00000395667 GOLGA6L10A6NI86 522 aa10.02□□□□□ -0.8
CDRT1-203ENST00000395667 ZNF233A6NK53 670 aa10.02□□□□□ -0.8
CDRT1-203ENST00000395667 TISP43B9A030 160 aa10.02□□□□□ -0.8
CDRT1-203ENST00000395667 FOXN3O00409 490 aaPredicted RBP10.02□□□□□ -0.8
CDRT1-203ENST00000395667 ITGA4P13612 1032 aa10.02□□□□□ -0.8
CDRT1-203ENST00000395667 USP8P40818 1118 aa10.02□□□□□ -0.8
CDRT1-203ENST00000395667 ATP1A2P50993 1020 aa10.02□□□□□ -0.8
CDRT1-203ENST00000395667 PHLDB3Q6NSJ2 640 aa10.02□□□□□ -0.8
CDRT1-203ENST00000395667 B3GNT9Q6UX72 402 aa10.02□□□□□ -0.8
CDRT1-203ENST00000395667 INTS8Q75QN2 995 aaKnown RBP10.02□□□□□ -0.8
CDRT1-203ENST00000395667 SLC9A9Q8IVB4 645 aa10.02□□□□□ -0.8
CDRT1-203ENST00000395667 RTKN2Q8IZC4 609 aa10.02□□□□□ -0.8
CDRT1-203ENST00000395667 TTLL6Q8N841 843 aa10.02□□□□□ -0.8
CDRT1-203ENST00000395667 CCDC26Q8TAB7 109 aa10.02□□□□□ -0.8
CDRT1-203ENST00000395667 ACCSQ96QU6 501 aa10.02□□□□□ -0.8
CDRT1-203ENST00000395667 GMLQ99445 158 aa10.02□□□□□ -0.8
CDRT1-203ENST00000395667 TSPYL1Q9H0U9 437 aa10.02□□□□□ -0.8
CDRT1-203ENST00000395667 CENPHQ9H3R5 247 aa10.02□□□□□ -0.8
CDRT1-203ENST00000395667 TMEM206Q9H813 350 aa10.02□□□□□ -0.8
CDRT1-203ENST00000395667 UBE2TQ9NPD8 197 aaPredicted RBP10.02□□□□□ -0.8
CDRT1-203ENST00000395667 COL20A1Q9P218 1284 aa10.02□□□□□ -0.8
CDRT1-203ENST00000395667 AMACRQ9UHK6 382 aa10.02□□□□□ -0.8
CDRT1-203ENST00000395667 STXBP5LQ9Y2K9 1186 aa10.02□□□□□ -0.8
CDRT1-203ENST00000395667 ZHX2Q9Y6X8 837 aa10.02□□□□□ -0.8
CDRT1-203ENST00000395667 TBC1D12O60347 775 aa10.02□□□□□ -0.81
CDRT1-203ENST00000395667 PPP1R37O75864 691 aa10.02□□□□□ -0.81
CDRT1-203ENST00000395667 FGGP02679 453 aa10.02□□□□□ -0.81
CDRT1-203ENST00000395667 HSD17B4P51659 736 aa10.02□□□□□ -0.81
CDRT1-203ENST00000395667 VAMP7P51809 220 aa10.02□□□□□ -0.81
CDRT1-203ENST00000395667 DLG4P78352 724 aa10.02□□□□□ -0.81
CDRT1-203ENST00000395667 NAA35Q5VZE5 725 aa10.02□□□□□ -0.81
CDRT1-203ENST00000395667 BCAS4Q8TDM0 211 aa10.02□□□□□ -0.81
CDRT1-203ENST00000395667 HES6Q96HZ4 224 aa10.02□□□□□ -0.81
CDRT1-203ENST00000395667 GPR88Q9GZN0 384 aa10.02□□□□□ -0.81
CDRT1-203ENST00000395667 SCAF8Q9UPN6 1271 aaKnown RBP10.02□□□□□ -0.81
CDRT1-203ENST00000395667 PLAAQ9Y263 795 aa10.02□□□□□ -0.81
CDRT1-203ENST00000395667 TRIM66O15016 1216 aa10.01□□□□□ -0.81
CDRT1-203ENST00000395667 RFX1P22670 979 aa10.01□□□□□ -0.81
CDRT1-203ENST00000395667 PTGER2P43116 358 aa10.01□□□□□ -0.81
CDRT1-203ENST00000395667 QARSP47897 775 aaKnown RBP10.01□□□□□ -0.81
CDRT1-203ENST00000395667 GCLMP48507 274 aa10.01□□□□□ -0.81
CDRT1-203ENST00000395667 TBC1D10BQ4KMP7 808 aaPredicted RBP10.01□□□□□ -0.81
CDRT1-203ENST00000395667 CEP85LQ5SZL2 805 aa10.01□□□□□ -0.81
CDRT1-203ENST00000395667 MCF2L2Q86YR7 1114 aa10.01□□□□□ -0.81
CDRT1-203ENST00000395667 PRPF38AQ8NAV1 312 aaKnown RBP10.01□□□□□ -0.81
CDRT1-203ENST00000395667 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.01□□□□□ -0.81
CDRT1-203ENST00000395667 CBWD1Q9BRT8 395 aa10.01□□□□□ -0.81
CDRT1-203ENST00000395667 THAP2Q9H0W7 228 aa10.01□□□□□ -0.81
CDRT1-203ENST00000395667 TAS2R14Q9NYV8 317 aa10.01□□□□□ -0.81
CDRT1-203ENST00000395667 PPP1R9AQ9ULJ8 1098 aa10.01□□□□□ -0.81
CDRT1-203ENST00000395667 CTDP1Q9Y5B0 961 aaPredicted RBP10.01□□□□□ -0.81
CDRT1-203ENST00000395667 NCANO14594 1321 aa10.01□□□□□ -0.81
CDRT1-203ENST00000395667 IGSF9BQ9UPX0 1349 aa10.01□□□□□ -0.81
CDRT1-203ENST00000395667 EIF3HO15372 352 aaKnown RBP eCLIP10.01□□□□□ -0.81
CDRT1-203ENST00000395667 CLSTN1O94985 981 aa10.01□□□□□ -0.81
CDRT1-203ENST00000395667 EIF2AK2P19525 551 aaKnown RBP10.01□□□□□ -0.81
CDRT1-203ENST00000395667 HSPA9P38646 679 aaKnown RBP10.01□□□□□ -0.81
CDRT1-203ENST00000395667 CCT5P48643 541 aa10.01□□□□□ -0.81
CDRT1-203ENST00000395667 RARRES1P49788 294 aa10.01□□□□□ -0.81
CDRT1-203ENST00000395667 PDCLQ13371 301 aa10.01□□□□□ -0.81
CDRT1-203ENST00000395667 MTMR1Q13613 665 aa10.01□□□□□ -0.81
CDRT1-203ENST00000395667 ALCAMQ13740 583 aa10.01□□□□□ -0.81
CDRT1-203ENST00000395667 MYBPC2Q14324 1141 aa10.01□□□□□ -0.81
CDRT1-203ENST00000395667 KCTD19Q17RG1 926 aaPredicted RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms