RNA–Protein interactions for RNA: ENST00000395548.6

AP3S1-202, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP3S1, Length 1,180 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-202ENST00000395548 POU3F3P20264 500 aaPredicted RBP6.89□□□□□ -1.31
AP3S1-202ENST00000395548 IL13P35225 146 aa6.89□□□□□ -1.31
AP3S1-202ENST00000395548 NOP2P46087 812 aaKnown RBP6.89□□□□□ -1.31
AP3S1-202ENST00000395548 LINC00310P59036 64 aa6.89□□□□□ -1.31
AP3S1-202ENST00000395548 FPGSQ05932 587 aa6.89□□□□□ -1.31
AP3S1-202ENST00000395548 TCF15Q12870 199 aa6.89□□□□□ -1.31
AP3S1-202ENST00000395548 LAPTM5Q13571 262 aa6.89□□□□□ -1.31
AP3S1-202ENST00000395548 HSF5Q4G112 596 aaPredicted RBP6.89□□□□□ -1.31
AP3S1-202ENST00000395548 TDRD10Q5VZ19 366 aaKnown RBP6.89□□□□□ -1.31
AP3S1-202ENST00000395548 CRTC3Q6UUV7 619 aa6.89□□□□□ -1.31
AP3S1-202ENST00000395548 NOP9Q86U38 636 aaKnown RBP6.89□□□□□ -1.31
AP3S1-202ENST00000395548 SMCR8Q8TEV9 937 aaPredicted RBP6.89□□□□□ -1.31
AP3S1-202ENST00000395548 WRNIP1Q96S55 665 aa6.89□□□□□ -1.31
AP3S1-202ENST00000395548 UPF3BQ9BZI7 483 aaKnown RBP6.89□□□□□ -1.31
AP3S1-202ENST00000395548 COA1Q9GZY4 146 aa6.89□□□□□ -1.31
AP3S1-202ENST00000395548 PDLIM7Q9NR12 457 aa6.89□□□□□ -1.31
AP3S1-202ENST00000395548 GINM1Q9NU53 330 aa6.89□□□□□ -1.31
AP3S1-202ENST00000395548 AP5S1Q9NUS5 200 aa6.89□□□□□ -1.31
AP3S1-202ENST00000395548 ERVK13-1Q9NX77 482 aa6.89□□□□□ -1.31
AP3S1-202ENST00000395548 SIRT5Q9NXA8 310 aa6.89□□□□□ -1.31
AP3S1-202ENST00000395548 GPR55Q9Y2T6 319 aaPredicted RBP6.89□□□□□ -1.31
AP3S1-202ENST00000395548 RRP7AQ9Y3A4 280 aaKnown RBP6.89□□□□□ -1.31
AP3S1-202ENST00000395548 RPAP1Q9BWH6 1393 aaPredicted RBP6.89□□□□□ -1.31
AP3S1-202ENST00000395548 MAST2Q6P0Q8 1798 aa6.89□□□□□ -1.31
AP3S1-202ENST00000395548 ZNF292O60281 2723 aa6.89□□□□□ -1.31
AP3S1-202ENST00000395548 DNM1LO00429 736 aa6.88□□□□□ -1.31
AP3S1-202ENST00000395548 SHOXO15266 292 aa6.88□□□□□ -1.31
AP3S1-202ENST00000395548 MSCO60682 206 aa6.88□□□□□ -1.31
AP3S1-202ENST00000395548 EFEMP2O95967 443 aa6.88□□□□□ -1.31
AP3S1-202ENST00000395548 TP53P04637 393 aaPredicted RBP6.88□□□□□ -1.31
AP3S1-202ENST00000395548 MPOP05164 745 aa6.88□□□□□ -1.31
AP3S1-202ENST00000395548 SRSF3P84103 164 aaKnown RBP6.88□□□□□ -1.31
AP3S1-202ENST00000395548 TMEM62Q0P6H9 643 aa6.88□□□□□ -1.31
AP3S1-202ENST00000395548 TCEAL1Q15170 157 aa6.88□□□□□ -1.31
AP3S1-202ENST00000395548 AXDND1Q5T1B0 1012 aaPredicted RBP6.88□□□□□ -1.31
AP3S1-202ENST00000395548 DCAF15Q66K64 600 aa6.88□□□□□ -1.31
AP3S1-202ENST00000395548 SLC39A5Q6ZMH5 540 aa6.88□□□□□ -1.31
AP3S1-202ENST00000395548 RUFY4Q6ZNE9 571 aa6.88□□□□□ -1.31
AP3S1-202ENST00000395548 LCNL1Q6ZST4 164 aa6.88□□□□□ -1.31
AP3S1-202ENST00000395548 FASTKD5Q7L8L6 764 aaKnown RBP6.88□□□□□ -1.31
AP3S1-202ENST00000395548 BMP8AQ7Z5Y6 402 aa6.88□□□□□ -1.31
AP3S1-202ENST00000395548 METTL16Q86W50 562 aaKnown RBP6.88□□□□□ -1.31
AP3S1-202ENST00000395548 PPFIBP1Q86W92 1011 aa6.88□□□□□ -1.31
AP3S1-202ENST00000395548 LSRQ86X29 649 aaPredicted RBP6.88□□□□□ -1.31
AP3S1-202ENST00000395548 SUGP1Q8IWZ8 645 aaKnown RBP6.88□□□□□ -1.31
AP3S1-202ENST00000395548 PLCD4Q9BRC7 762 aa6.88□□□□□ -1.31
AP3S1-202ENST00000395548 GP6Q9HCN6 339 aa6.88□□□□□ -1.31
AP3S1-202ENST00000395548 FAM86C1Q9NVL1 165 aa6.88□□□□□ -1.31
AP3S1-202ENST00000395548 ZNF214Q9UL59 606 aaPredicted RBP6.88□□□□□ -1.31
AP3S1-202ENST00000395548 SLC45A1Q9Y2W3 748 aa6.88□□□□□ -1.31
AP3S1-202ENST00000395548 FHOD1Q9Y613 1164 aa6.88□□□□□ -1.31
AP3S1-202ENST00000395548 GPR179Q6PRD1 2367 aa6.88□□□□□ -1.31
AP3S1-202ENST00000395548 OTOFQ9HC10 1997 aa6.88□□□□□ -1.31
AP3S1-202ENST00000395548 MED23Q9ULK4 1368 aa6.87□□□□□ -1.31
AP3S1-202ENST00000395548 TRIM43BA6NCK2 446 aa6.87□□□□□ -1.31
AP3S1-202ENST00000395548 PRR23AA6NEV1 266 aa6.87□□□□□ -1.31
AP3S1-202ENST00000395548 GSTM1P09488 218 aa6.87□□□□□ -1.31
AP3S1-202ENST00000395548 HMOX1P09601 288 aa6.87□□□□□ -1.31
AP3S1-202ENST00000395548 ITGA4P13612 1032 aa6.87□□□□□ -1.31
AP3S1-202ENST00000395548 MYL6BP14649 208 aa6.87□□□□□ -1.31
AP3S1-202ENST00000395548 CD247P20963 164 aa6.87□□□□□ -1.31
AP3S1-202ENST00000395548 SOX9P48436 509 aa6.87□□□□□ -1.31
AP3S1-202ENST00000395548 EPHB4P54760 987 aa6.87□□□□□ -1.31
AP3S1-202ENST00000395548 ZNF445P59923 1031 aa6.87□□□□□ -1.31
AP3S1-202ENST00000395548 ERVFRD-1P60508 538 aa6.87□□□□□ -1.31
AP3S1-202ENST00000395548 ZYXQ15942 572 aaKnown RBP6.87□□□□□ -1.31
AP3S1-202ENST00000395548 CFAP100Q494V2 611 aa6.87□□□□□ -1.31
AP3S1-202ENST00000395548 EPHA10Q5JZY3 1008 aa6.87□□□□□ -1.31
AP3S1-202ENST00000395548 HLA-DQA1Q5Y7H0 255 aa6.87□□□□□ -1.31
AP3S1-202ENST00000395548 SLCO6A1Q86UG4 719 aa6.87□□□□□ -1.31
AP3S1-202ENST00000395548 NLRP10Q86W26 655 aa6.87□□□□□ -1.31
AP3S1-202ENST00000395548 NAT16Q8N8M0 369 aa6.87□□□□□ -1.31
AP3S1-202ENST00000395548 OR6P1Q8NGX9 317 aa6.87□□□□□ -1.31
AP3S1-202ENST00000395548 RASGRP4Q8TDF6 673 aa6.87□□□□□ -1.31
AP3S1-202ENST00000395548 TRIB2Q92519 343 aa6.87□□□□□ -1.31
AP3S1-202ENST00000395548 TRIM43Q96BQ3 446 aaPredicted RBP6.87□□□□□ -1.31
AP3S1-202ENST00000395548 GPRASP2Q96D09 838 aa6.87□□□□□ -1.31
AP3S1-202ENST00000395548 TANGO6Q9C0B7 1094 aa6.87□□□□□ -1.31
AP3S1-202ENST00000395548 CNOT6Q9ULM6 557 aaKnown RBP6.87□□□□□ -1.31
AP3S1-202ENST00000395548 EFR3BQ9Y2G0 817 aa6.87□□□□□ -1.31
AP3S1-202ENST00000395548 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.87□□□□□ -1.31
AP3S1-202ENST00000395548 TMA7Q9Y2S6 64 aaKnown RBP6.87□□□□□ -1.31
AP3S1-202ENST00000395548 SF3B6Q9Y3B4 125 aaKnown RBP6.87□□□□□ -1.31
AP3S1-202ENST00000395548 MTCH2Q9Y6C9 303 aa6.87□□□□□ -1.31
AP3S1-202ENST00000395548 RIF1Q5UIP0 2472 aaKnown RBP6.87□□□□□ -1.31
AP3S1-202ENST00000395548 TRIOO75962 3097 aa6.87□□□□□ -1.31
AP3S1-202ENST00000395548 NCOR2Q9Y618 2525 aa6.86□□□□□ -1.31
AP3S1-202ENST00000395548 CEMIPQ8WUJ3 1361 aa6.86□□□□□ -1.31
AP3S1-202ENST00000395548 GAKO14976 1311 aa6.86□□□□□ -1.31
AP3S1-202ENST00000395548 A0A1W2PQ27 194 aa6.86□□□□□ -1.31
AP3S1-202ENST00000395548 A0A1W2PQ64 194 aa6.86□□□□□ -1.31
AP3S1-202ENST00000395548 A0A1W2PQC6 194 aa6.86□□□□□ -1.31
AP3S1-202ENST00000395548 A0A1W2PQD8 194 aa6.86□□□□□ -1.31
AP3S1-202ENST00000395548 CXCL11O14625 94 aa6.86□□□□□ -1.31
AP3S1-202ENST00000395548 MARCH6O60337 910 aa6.86□□□□□ -1.31
AP3S1-202ENST00000395548 ZKSCAN1P17029 563 aaPredicted RBP6.86□□□□□ -1.31
AP3S1-202ENST00000395548 PRKCAP17252 672 aa6.86□□□□□ -1.31
AP3S1-202ENST00000395548 RBM5P52756 815 aaKnown RBP eCLIP6.86□□□□□ -1.31
AP3S1-202ENST00000395548 YBX1P67809 324 aaKnown RBP6.86□□□□□ -1.31
AP3S1-202ENST00000395548 CYP4F8P98187 520 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms