RNA–Protein interactions for RNA: ENST00000395363.5

HLA-DQA1-203, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,206 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-203ENST00000395363 HELQQ8TDG4 1101 aa13□□□□□ -0.33
HLA-DQA1-203ENST00000395363 C8orf76Q96K31 380 aa13□□□□□ -0.33
HLA-DQA1-203ENST00000395363 FAM20AQ96MK3 541 aa13□□□□□ -0.33
HLA-DQA1-203ENST00000395363 CASD1Q96PB1 797 aa13□□□□□ -0.33
HLA-DQA1-203ENST00000395363 EIF2AK1Q9BQI3 630 aaKnown RBP13□□□□□ -0.33
HLA-DQA1-203ENST00000395363 C11orf84Q9BUA3 381 aaPredicted RBP13□□□□□ -0.33
HLA-DQA1-203ENST00000395363 NSUN3Q9H649 340 aaKnown RBP13□□□□□ -0.33
HLA-DQA1-203ENST00000395363 CWH43Q9H720 699 aa13□□□□□ -0.33
HLA-DQA1-203ENST00000395363 XPNPEP1Q9NQW7 623 aa13□□□□□ -0.33
HLA-DQA1-203ENST00000395363 TYW1Q9NV66 732 aaKnown RBP13□□□□□ -0.33
HLA-DQA1-203ENST00000395363 CLDND1Q9NY35 253 aa13□□□□□ -0.33
HLA-DQA1-203ENST00000395363 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.99□□□□□ -0.33
HLA-DQA1-203ENST00000395363 B4GALT3O60512 393 aa12.99□□□□□ -0.33
HLA-DQA1-203ENST00000395363 NEMFO60524 1076 aa12.99□□□□□ -0.33
HLA-DQA1-203ENST00000395363 TBX10O75333 385 aa12.99□□□□□ -0.33
HLA-DQA1-203ENST00000395363 P4HBP07237 508 aaKnown RBP12.99□□□□□ -0.33
HLA-DQA1-203ENST00000395363 SRGAP2CP0DJJ0 459 aa12.99□□□□□ -0.33
HLA-DQA1-203ENST00000395363 YWHABP31946 246 aaKnown RBP12.99□□□□□ -0.33
HLA-DQA1-203ENST00000395363 LTBRP36941 435 aa12.99□□□□□ -0.33
HLA-DQA1-203ENST00000395363 POLGP54098 1239 aaPredicted RBP12.99□□□□□ -0.33
HLA-DQA1-203ENST00000395363 EMC2Q15006 297 aa12.99□□□□□ -0.33
HLA-DQA1-203ENST00000395363 EPHA7Q15375 998 aa12.99□□□□□ -0.33
HLA-DQA1-203ENST00000395363 PTPROQ16827 1216 aa12.99□□□□□ -0.33
HLA-DQA1-203ENST00000395363 XKR9Q5GH70 373 aa12.99□□□□□ -0.33
HLA-DQA1-203ENST00000395363 COLGALT1Q8NBJ5 622 aa12.99□□□□□ -0.33
HLA-DQA1-203ENST00000395363 ASAP3Q8TDY4 903 aa12.99□□□□□ -0.33
HLA-DQA1-203ENST00000395363 PIGOQ8TEQ8 1089 aa12.99□□□□□ -0.33
HLA-DQA1-203ENST00000395363 POF1BQ8WVV4 589 aa12.99□□□□□ -0.33
HLA-DQA1-203ENST00000395363 TTC12Q9H892 705 aaPredicted RBP12.99□□□□□ -0.33
HLA-DQA1-203ENST00000395363 ATP6V0A4Q9HBG4 840 aa12.99□□□□□ -0.33
HLA-DQA1-203ENST00000395363 TMEM161AQ9NX61 479 aa12.99□□□□□ -0.33
HLA-DQA1-203ENST00000395363 COG5Q9UP83 839 aa12.99□□□□□ -0.33
HLA-DQA1-203ENST00000395363 PIN4Q9Y237 131 aaKnown RBP12.99□□□□□ -0.33
HLA-DQA1-203ENST00000395363 MYH15Q9Y2K3 1946 aa12.98□□□□□ -0.33
HLA-DQA1-203ENST00000395363 NT5C1B-RDH14C9J2C7 533 aa12.98□□□□□ -0.33
HLA-DQA1-203ENST00000395363 TBX3O15119 743 aa12.98□□□□□ -0.33
HLA-DQA1-203ENST00000395363 SLITRK3O94933 977 aa12.98□□□□□ -0.33
HLA-DQA1-203ENST00000395363 MAEAQ7L5Y9 396 aa12.98□□□□□ -0.33
HLA-DQA1-203ENST00000395363 ZNF598Q86UK7 904 aaKnown RBP12.98□□□□□ -0.33
HLA-DQA1-203ENST00000395363 PRPF31Q8WWY3 499 aaKnown RBP12.98□□□□□ -0.33
HLA-DQA1-203ENST00000395363 MTMR9Q96QG7 549 aa12.98□□□□□ -0.33
HLA-DQA1-203ENST00000395363 GCOM2Q9BZD3 368 aaPredicted RBP12.98□□□□□ -0.33
HLA-DQA1-203ENST00000395363 DHX33Q9H6R0 707 aaKnown RBP12.98□□□□□ -0.33
HLA-DQA1-203ENST00000395363 IFT122Q9HBG6 1241 aa12.98□□□□□ -0.33
HLA-DQA1-203ENST00000395363 POLD4Q9HCU8 107 aa12.98□□□□□ -0.33
HLA-DQA1-203ENST00000395363 C1orf112Q9NSG2 853 aa12.98□□□□□ -0.33
HLA-DQA1-203ENST00000395363 COL4A3BPQ9Y5P4 624 aa12.98□□□□□ -0.33
HLA-DQA1-203ENST00000395363 CITO14578 2027 aa12.97□□□□□ -0.33
HLA-DQA1-203ENST00000395363 PER2O15055 1255 aa12.97□□□□□ -0.33
HLA-DQA1-203ENST00000395363 MED24O75448 989 aa12.97□□□□□ -0.33
HLA-DQA1-203ENST00000395363 RB1P06400 928 aa12.97□□□□□ -0.33
HLA-DQA1-203ENST00000395363 NRIP1P48552 1158 aa12.97□□□□□ -0.33
HLA-DQA1-203ENST00000395363 AFF1P51825 1210 aaKnown RBP12.97□□□□□ -0.33
HLA-DQA1-203ENST00000395363 ERVFC1P60507 584 aa12.97□□□□□ -0.33
HLA-DQA1-203ENST00000395363 FAM189BP81408 668 aa12.97□□□□□ -0.33
HLA-DQA1-203ENST00000395363 LAMTOR4Q0VGL1 99 aa12.97□□□□□ -0.33
HLA-DQA1-203ENST00000395363 PLPP4Q5VZY2 271 aa12.97□□□□□ -0.33
HLA-DQA1-203ENST00000395363 TWF2Q6IBS0 349 aaKnown RBP12.97□□□□□ -0.33
HLA-DQA1-203ENST00000395363 PTCRAQ6ISU1 281 aaPredicted RBP12.97□□□□□ -0.33
HLA-DQA1-203ENST00000395363 POTEGQ6S5H5 508 aa12.97□□□□□ -0.33
HLA-DQA1-203ENST00000395363 CATSPER4Q7RTX7 472 aa12.97□□□□□ -0.33
HLA-DQA1-203ENST00000395363 TMEM173Q86WV6 379 aaPredicted RBP12.97□□□□□ -0.33
HLA-DQA1-203ENST00000395363 CDR2LQ86X02 465 aaPredicted RBP12.97□□□□□ -0.33
HLA-DQA1-203ENST00000395363 C4orf19Q8IY42 314 aa12.97□□□□□ -0.33
HLA-DQA1-203ENST00000395363 THNSL1Q8IYQ7 743 aa12.97□□□□□ -0.33
HLA-DQA1-203ENST00000395363 CPB2Q96IY4 423 aa12.97□□□□□ -0.33
HLA-DQA1-203ENST00000395363 GPRC5CQ9NQ84 441 aa12.97□□□□□ -0.33
HLA-DQA1-203ENST00000395363 CDH22Q9UJ99 828 aa12.97□□□□□ -0.33
HLA-DQA1-203ENST00000395363 PCDHA12Q9UN75 941 aa12.97□□□□□ -0.33
HLA-DQA1-203ENST00000395363 INPP5FQ9Y2H2 1132 aa12.97□□□□□ -0.33
HLA-DQA1-203ENST00000395363 VWA8A3KMH1 1905 aa12.96□□□□□ -0.33
HLA-DQA1-203ENST00000395363 USO1O60763 962 aaKnown RBP12.96□□□□□ -0.33
HLA-DQA1-203ENST00000395363 FGF18O76093 207 aa12.96□□□□□ -0.33
HLA-DQA1-203ENST00000395363 BAG4O95429 457 aaKnown RBP12.96□□□□□ -0.33
HLA-DQA1-203ENST00000395363 GLP2RO95838 553 aa12.96□□□□□ -0.33
HLA-DQA1-203ENST00000395363 SPATA31C1P0DKV0 1188 aa12.96□□□□□ -0.33
HLA-DQA1-203ENST00000395363 ZSCAN20P17040 1043 aaPredicted RBP12.96□□□□□ -0.33
HLA-DQA1-203ENST00000395363 TECP42680 631 aa12.96□□□□□ -0.33
HLA-DQA1-203ENST00000395363 RBM25P49756 843 aaKnown RBP12.96□□□□□ -0.33
HLA-DQA1-203ENST00000395363 DNM2P50570 870 aa12.96□□□□□ -0.33
HLA-DQA1-203ENST00000395363 AAK1Q2M2I8 961 aa12.96□□□□□ -0.33
HLA-DQA1-203ENST00000395363 SLFN12Q8IYM2 578 aa12.96□□□□□ -0.33
HLA-DQA1-203ENST00000395363 RNF149Q8NC42 400 aa12.96□□□□□ -0.33
HLA-DQA1-203ENST00000395363 VN1R2Q8NFZ6 395 aa12.96□□□□□ -0.33
HLA-DQA1-203ENST00000395363 FEZF2Q8TBJ5 459 aa12.96□□□□□ -0.33
HLA-DQA1-203ENST00000395363 NEK9Q8TD19 979 aa12.96□□□□□ -0.33
HLA-DQA1-203ENST00000395363 BCL7CQ8WUZ0 217 aaPredicted RBP12.96□□□□□ -0.33
HLA-DQA1-203ENST00000395363 SLC7A3Q8WY07 619 aa12.96□□□□□ -0.33
HLA-DQA1-203ENST00000395363 PABPC5Q96DU9 382 aaKnown RBP12.96□□□□□ -0.33
HLA-DQA1-203ENST00000395363 PLVAPQ9BX97 442 aa12.96□□□□□ -0.33
HLA-DQA1-203ENST00000395363 TMEM117Q9H0C3 514 aa12.96□□□□□ -0.33
HLA-DQA1-203ENST00000395363 EPHX3Q9H6B9 360 aa12.96□□□□□ -0.33
HLA-DQA1-203ENST00000395363 ZSWIM4Q9H7M6 989 aa12.96□□□□□ -0.33
HLA-DQA1-203ENST00000395363 BARX2Q9UMQ3 279 aaPredicted RBP12.96□□□□□ -0.33
HLA-DQA1-203ENST00000395363 USP20Q9Y2K6 914 aa12.96□□□□□ -0.33
HLA-DQA1-203ENST00000395363 RWDD3Q9Y3V2 267 aa12.96□□□□□ -0.33
HLA-DQA1-203ENST00000395363 ANK1P16157 1881 aa12.95□□□□□ -0.34
HLA-DQA1-203ENST00000395363 PDCD11Q14690 1871 aaKnown RBP12.95□□□□□ -0.34
HLA-DQA1-203ENST00000395363 WDFY4Q6ZS81 3184 aa12.95□□□□□ -0.34
HLA-DQA1-203ENST00000395363 FAM86C2PA6NEL3 165 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms