RNA–Protein interactions for RNA: ENST00000395305.7

HLA-DMA-203, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

BASIC

Gene HLA-DMA, Length 777 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-203ENST00000395305 CUL4AQ13619 759 aa15.59■□□□□ 0.09
HLA-DMA-203ENST00000395305 MXD4Q14582 209 aaPredicted RBP15.59■□□□□ 0.09
HLA-DMA-203ENST00000395305 NAALADL2Q58DX5 795 aa15.59■□□□□ 0.09
HLA-DMA-203ENST00000395305 FAM102BQ5T8I3 360 aa15.59■□□□□ 0.09
HLA-DMA-203ENST00000395305 LARP1BQ659C4 914 aaKnown RBP15.59■□□□□ 0.09
HLA-DMA-203ENST00000395305 SRGAP1Q7Z6B7 1085 aa15.59■□□□□ 0.09
HLA-DMA-203ENST00000395305 FERMT3Q86UX7 667 aa15.59■□□□□ 0.09
HLA-DMA-203ENST00000395305 ECHDC2Q86YB7 292 aa15.59■□□□□ 0.09
HLA-DMA-203ENST00000395305 PIGOQ8TEQ8 1089 aa15.59■□□□□ 0.09
HLA-DMA-203ENST00000395305 NLRP4Q96MN2 994 aa15.59■□□□□ 0.09
HLA-DMA-203ENST00000395305 MTRQ99707 1265 aa15.59■□□□□ 0.09
HLA-DMA-203ENST00000395305 C11orf84Q9BUA3 381 aaPredicted RBP15.59■□□□□ 0.09
HLA-DMA-203ENST00000395305 TRAIPQ9BWF2 469 aa15.59■□□□□ 0.09
HLA-DMA-203ENST00000395305 DBR1Q9UK59 544 aaKnown RBP15.59■□□□□ 0.09
HLA-DMA-203ENST00000395305 STK24Q9Y6E0 443 aa15.59■□□□□ 0.09
HLA-DMA-203ENST00000395305 MRPL42Q9Y6G3 142 aaKnown RBP15.59■□□□□ 0.09
HLA-DMA-203ENST00000395305 RALGAPA2Q2PPJ7 1873 aa15.59■□□□□ 0.09
HLA-DMA-203ENST00000395305 NLRC5Q86WI3 1866 aa15.59■□□□□ 0.09
HLA-DMA-203ENST00000395305 A0A087WWV3 80 aa15.58■□□□□ 0.08
HLA-DMA-203ENST00000395305 LAD1O00515 517 aa15.58■□□□□ 0.08
HLA-DMA-203ENST00000395305 HOXA2O43364 376 aa15.58■□□□□ 0.08
HLA-DMA-203ENST00000395305 MED24O75448 989 aa15.58■□□□□ 0.08
HLA-DMA-203ENST00000395305 IBSPP21815 317 aaPredicted RBP15.58■□□□□ 0.08
HLA-DMA-203ENST00000395305 GATMP50440 423 aa15.58■□□□□ 0.08
HLA-DMA-203ENST00000395305 POU5F1BQ06416 359 aa15.58■□□□□ 0.08
HLA-DMA-203ENST00000395305 NBR1Q14596 966 aa15.58■□□□□ 0.08
HLA-DMA-203ENST00000395305 SKIV2LQ15477 1246 aaKnown RBP15.58■□□□□ 0.08
HLA-DMA-203ENST00000395305 PAN2Q504Q3 1202 aaKnown RBP15.58■□□□□ 0.08
HLA-DMA-203ENST00000395305 RILPL1Q5EBL4 403 aa15.58■□□□□ 0.08
HLA-DMA-203ENST00000395305 P2RX5Q93086 422 aa15.58■□□□□ 0.08
HLA-DMA-203ENST00000395305 XPNPEP1Q9NQW7 623 aa15.58■□□□□ 0.08
HLA-DMA-203ENST00000395305 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.58■□□□□ 0.08
HLA-DMA-203ENST00000395305 THEGQ9P2T0 379 aa15.58■□□□□ 0.08
HLA-DMA-203ENST00000395305 LRWD1Q9UFC0 647 aa15.58■□□□□ 0.08
HLA-DMA-203ENST00000395305 GTF3C3Q9Y5Q9 886 aa15.58■□□□□ 0.08
HLA-DMA-203ENST00000395305 TBKBP1A7MCY6 615 aa15.57■□□□□ 0.08
HLA-DMA-203ENST00000395305 DLL1O00548 723 aa15.57■□□□□ 0.08
HLA-DMA-203ENST00000395305 SKIP12755 728 aa15.57■□□□□ 0.08
HLA-DMA-203ENST00000395305 ARL2P36404 184 aa15.57■□□□□ 0.08
HLA-DMA-203ENST00000395305 PRPHP41219 470 aa15.57■□□□□ 0.08
HLA-DMA-203ENST00000395305 MRPS5P82675 430 aaKnown RBP15.57■□□□□ 0.08
HLA-DMA-203ENST00000395305 CATSPER4Q7RTX7 472 aa15.57■□□□□ 0.08
HLA-DMA-203ENST00000395305 CCDC43Q96MW1 224 aaKnown RBP15.57■□□□□ 0.08
HLA-DMA-203ENST00000395305 RAB34Q9BZG1 259 aa15.57■□□□□ 0.08
HLA-DMA-203ENST00000395305 LMAN2LQ9H0V9 348 aa15.57■□□□□ 0.08
HLA-DMA-203ENST00000395305 BMP2KQ9NSY1 1161 aaPredicted RBP15.57■□□□□ 0.08
HLA-DMA-203ENST00000395305 COG5Q9UP83 839 aa15.57■□□□□ 0.08
HLA-DMA-203ENST00000395305 ZNF623O75123 536 aa15.56■□□□□ 0.08
HLA-DMA-203ENST00000395305 FGFR1P11362 822 aa15.56■□□□□ 0.08
HLA-DMA-203ENST00000395305 PTENP60484 403 aa15.56■□□□□ 0.08
HLA-DMA-203ENST00000395305 TFDP1Q14186 410 aa15.56■□□□□ 0.08
HLA-DMA-203ENST00000395305 PCBP1Q15365 356 aaKnown RBP eCLIP15.56■□□□□ 0.08
HLA-DMA-203ENST00000395305 HAUS3Q68CZ6 603 aa15.56■□□□□ 0.08
HLA-DMA-203ENST00000395305 DTHD1Q6ZMT9 781 aa15.56■□□□□ 0.08
HLA-DMA-203ENST00000395305 ZNF598Q86UK7 904 aaKnown RBP15.56■□□□□ 0.08
HLA-DMA-203ENST00000395305 IGSF22Q8N9C0 903 aa15.56■□□□□ 0.08
HLA-DMA-203ENST00000395305 RNF149Q8NC42 400 aa15.56■□□□□ 0.08
HLA-DMA-203ENST00000395305 CASD1Q96PB1 797 aa15.56■□□□□ 0.08
HLA-DMA-203ENST00000395305 ASB2Q96Q27 587 aa15.56■□□□□ 0.08
HLA-DMA-203ENST00000395305 TMEM117Q9H0C3 514 aa15.56■□□□□ 0.08
HLA-DMA-203ENST00000395305 AAASQ9NRG9 546 aa15.56■□□□□ 0.08
HLA-DMA-203ENST00000395305 RNF19AQ9NV58 838 aa15.56■□□□□ 0.08
HLA-DMA-203ENST00000395305 TYW1Q9NV66 732 aaKnown RBP15.56■□□□□ 0.08
HLA-DMA-203ENST00000395305 PLAGL2Q9UPG8 496 aa15.56■□□□□ 0.08
HLA-DMA-203ENST00000395305 COL4A4P53420 1690 aaPredicted RBP15.56■□□□□ 0.08
HLA-DMA-203ENST00000395305 FNDC1Q4ZHG4 1894 aaPredicted RBP15.56■□□□□ 0.08
HLA-DMA-203ENST00000395305 ARID2Q68CP9 1835 aa15.55■□□□□ 0.08
HLA-DMA-203ENST00000395305 GRM6O15303 877 aa15.55■□□□□ 0.08
HLA-DMA-203ENST00000395305 CCT6AP40227 531 aaKnown RBP15.55■□□□□ 0.08
HLA-DMA-203ENST00000395305 PHKA2P46019 1235 aa15.55■□□□□ 0.08
HLA-DMA-203ENST00000395305 AAK1Q2M2I8 961 aa15.55■□□□□ 0.08
HLA-DMA-203ENST00000395305 TJAP1Q5JTD0 557 aa15.55■□□□□ 0.08
HLA-DMA-203ENST00000395305 SPOUT1Q5T280 376 aaKnown RBP15.55■□□□□ 0.08
HLA-DMA-203ENST00000395305 TWF2Q6IBS0 349 aaKnown RBP15.55■□□□□ 0.08
HLA-DMA-203ENST00000395305 IFNLR1Q8IU57 520 aaPredicted RBP15.55■□□□□ 0.08
HLA-DMA-203ENST00000395305 MCPH1Q8NEM0 835 aa15.55■□□□□ 0.08
HLA-DMA-203ENST00000395305 SYMPKQ92797 1274 aaKnown RBP15.55■□□□□ 0.08
HLA-DMA-203ENST00000395305 HLA-CQ95604 372 aa15.55■□□□□ 0.08
HLA-DMA-203ENST00000395305 MINDY3Q9H8M7 445 aa15.55■□□□□ 0.08
HLA-DMA-203ENST00000395305 AGPAT5Q9NUQ2 364 aa15.55■□□□□ 0.08
HLA-DMA-203ENST00000395305 PIN4Q9Y237 131 aaKnown RBP15.55■□□□□ 0.08
HLA-DMA-203ENST00000395305 PCDHB12Q9Y5F1 795 aa15.55■□□□□ 0.08
HLA-DMA-203ENST00000395305 CYP11B2P19099 503 aa15.54■□□□□ 0.08
HLA-DMA-203ENST00000395305 PDCP20941 246 aa15.54■□□□□ 0.08
HLA-DMA-203ENST00000395305 HOXA11P31270 313 aaPredicted RBP15.54■□□□□ 0.08
HLA-DMA-203ENST00000395305 IL17AQ16552 155 aa15.54■□□□□ 0.08
HLA-DMA-203ENST00000395305 CSPP1Q1MSJ5 1256 aa15.54■□□□□ 0.08
HLA-DMA-203ENST00000395305 TIGD5Q53EQ6 642 aa15.54■□□□□ 0.08
HLA-DMA-203ENST00000395305 POTEGQ6S5H5 508 aa15.54■□□□□ 0.08
HLA-DMA-203ENST00000395305 ABI1Q8IZP0 508 aa15.54■□□□□ 0.08
HLA-DMA-203ENST00000395305 KLHL23Q8NBE8 558 aa15.54■□□□□ 0.08
HLA-DMA-203ENST00000395305 SPPL3Q8TCT6 385 aa15.54■□□□□ 0.08
HLA-DMA-203ENST00000395305 RSPH1Q8WYR4 309 aa15.54■□□□□ 0.08
HLA-DMA-203ENST00000395305 COL25A1Q9BXS0 654 aaPredicted RBP15.54■□□□□ 0.08
HLA-DMA-203ENST00000395305 NFKBIZQ9BYH8 718 aa15.54■□□□□ 0.08
HLA-DMA-203ENST00000395305 CWH43Q9H720 699 aa15.54■□□□□ 0.08
HLA-DMA-203ENST00000395305 ALG13Q9NP73 1137 aaKnown RBP15.54■□□□□ 0.08
HLA-DMA-203ENST00000395305 FAM105AQ9NUU6 356 aa15.54■□□□□ 0.08
HLA-DMA-203ENST00000395305 XIRP2A4UGR9 3374 aa15.54■□□□□ 0.08
HLA-DMA-203ENST00000395305 CUL9Q8IWT3 2517 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms