RNA–Protein interactions for RNA: ENST00000394419.8

ACTN1-203, Transcript of actinin alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ACTN1, Length 3,464 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-203ENST00000394419 ZC3H4Q9UPT8 1303 aaKnown RBP11.41□□□□□ -0.58
ACTN1-203ENST00000394419 HMGB1P1B2RPK0 211 aaPredicted RBP11.41□□□□□ -0.58
ACTN1-203ENST00000394419 TGFB1I1O43294 461 aa11.41□□□□□ -0.58
ACTN1-203ENST00000394419 HARSP12081 509 aaKnown RBP11.41□□□□□ -0.58
ACTN1-203ENST00000394419 JAG1P78504 1218 aa11.41□□□□□ -0.58
ACTN1-203ENST00000394419 CUL1Q13616 776 aa11.41□□□□□ -0.58
ACTN1-203ENST00000394419 TRIP13Q15645 432 aaPredicted RBP11.41□□□□□ -0.58
ACTN1-203ENST00000394419 XKR9Q5GH70 373 aa11.41□□□□□ -0.58
ACTN1-203ENST00000394419 NLRP14Q86W24 1093 aa11.41□□□□□ -0.58
ACTN1-203ENST00000394419 RPUSD2Q8IZ73 545 aaKnown RBP11.41□□□□□ -0.58
ACTN1-203ENST00000394419 ARHGEF26Q96DR7 871 aa11.41□□□□□ -0.58
ACTN1-203ENST00000394419 AGBL1Q96MI9 1066 aa11.41□□□□□ -0.58
ACTN1-203ENST00000394419 WDR18Q9BV38 432 aa11.41□□□□□ -0.58
ACTN1-203ENST00000394419 RAB17Q9H0T7 212 aa11.41□□□□□ -0.58
ACTN1-203ENST00000394419 ISCUQ9H1K1 167 aa11.41□□□□□ -0.58
ACTN1-203ENST00000394419 PLCB1Q9NQ66 1216 aa11.41□□□□□ -0.58
ACTN1-203ENST00000394419 SSTR3P32745 418 aaPredicted RBP11.4□□□□□ -0.58
ACTN1-203ENST00000394419 MDH1P40925 334 aaKnown RBP11.4□□□□□ -0.58
ACTN1-203ENST00000394419 KCNJ1P48048 391 aa11.4□□□□□ -0.58
ACTN1-203ENST00000394419 DENND2CQ68D51 928 aa11.4□□□□□ -0.58
ACTN1-203ENST00000394419 CCDC50Q8IVM0 306 aa11.4□□□□□ -0.58
ACTN1-203ENST00000394419 IQCKQ8N0W5 287 aa11.4□□□□□ -0.58
ACTN1-203ENST00000394419 GPRC5CQ9NQ84 441 aa11.4□□□□□ -0.58
ACTN1-203ENST00000394419 NR2E1Q9Y466 385 aa11.4□□□□□ -0.58
ACTN1-203ENST00000394419 STRCQ7RTU9 1775 aa11.4□□□□□ -0.58
ACTN1-203ENST00000394419 F8VZ95 297 aa11.4□□□□□ -0.58
ACTN1-203ENST00000394419 RBAK-RBAKDNI3L0D1 243 aa11.4□□□□□ -0.58
ACTN1-203ENST00000394419 TBX3O15119 743 aa11.4□□□□□ -0.58
ACTN1-203ENST00000394419 RDXP35241 583 aaKnown RBP11.4□□□□□ -0.58
ACTN1-203ENST00000394419 EPC2Q52LR7 807 aa11.4□□□□□ -0.58
ACTN1-203ENST00000394419 HYIQ5T013 277 aa11.4□□□□□ -0.58
ACTN1-203ENST00000394419 STRIP1Q5VSL9 837 aa11.4□□□□□ -0.58
ACTN1-203ENST00000394419 OTOP1Q7RTM1 612 aa11.4□□□□□ -0.58
ACTN1-203ENST00000394419 PALB2Q86YC2 1186 aa11.4□□□□□ -0.58
ACTN1-203ENST00000394419 RFFLQ8WZ73 363 aa11.4□□□□□ -0.58
ACTN1-203ENST00000394419 NAP1L3Q99457 506 aaPredicted RBP11.4□□□□□ -0.58
ACTN1-203ENST00000394419 CBWD1Q9BRT8 395 aa11.4□□□□□ -0.58
ACTN1-203ENST00000394419 KIFC3Q9BVG8 833 aa11.4□□□□□ -0.58
ACTN1-203ENST00000394419 STK33Q9BYT3 514 aa11.4□□□□□ -0.58
ACTN1-203ENST00000394419 NEUROG2Q9H2A3 272 aa11.4□□□□□ -0.58
ACTN1-203ENST00000394419 UNC45AQ9H3U1 944 aa11.4□□□□□ -0.58
ACTN1-203ENST00000394419 APEX2Q9UBZ4 518 aa11.4□□□□□ -0.58
ACTN1-203ENST00000394419 ASIC3Q9UHC3 531 aa11.4□□□□□ -0.58
ACTN1-203ENST00000394419 CCDC188H7C350 402 aa11.4□□□□□ -0.59
ACTN1-203ENST00000394419 DLG4P78352 724 aa11.4□□□□□ -0.59
ACTN1-203ENST00000394419 MTMR3Q13615 1198 aa11.4□□□□□ -0.59
ACTN1-203ENST00000394419 CCDC38Q502W7 563 aa11.4□□□□□ -0.59
ACTN1-203ENST00000394419 OTUD6AQ7L8S5 288 aa11.4□□□□□ -0.59
ACTN1-203ENST00000394419 LDHDQ86WU2 507 aa11.4□□□□□ -0.59
ACTN1-203ENST00000394419 SLC30A5Q8TAD4 765 aa11.4□□□□□ -0.59
ACTN1-203ENST00000394419 LNX1Q8TBB1 728 aaPredicted RBP11.4□□□□□ -0.59
ACTN1-203ENST00000394419 ZNF473Q8WTR7 871 aaKnown RBP11.4□□□□□ -0.59
ACTN1-203ENST00000394419 KAT5Q92993 513 aa11.4□□□□□ -0.59
ACTN1-203ENST00000394419 MRRFQ96E11 262 aaKnown RBP11.4□□□□□ -0.59
ACTN1-203ENST00000394419 KCNK9Q9NPC2 374 aa11.4□□□□□ -0.59
ACTN1-203ENST00000394419 MYO1FO00160 1098 aa11.39□□□□□ -0.59
ACTN1-203ENST00000394419 RGS16O15492 202 aaPredicted RBP11.39□□□□□ -0.59
ACTN1-203ENST00000394419 CYP26A1O43174 497 aa11.39□□□□□ -0.59
ACTN1-203ENST00000394419 CTNND1O60716 968 aaKnown RBP11.39□□□□□ -0.59
ACTN1-203ENST00000394419 MXI1P50539 228 aa11.39□□□□□ -0.59
ACTN1-203ENST00000394419 TRAF1Q13077 416 aa11.39□□□□□ -0.59
ACTN1-203ENST00000394419 Q4G0T1 1027 aa11.39□□□□□ -0.59
ACTN1-203ENST00000394419 C2CD6Q53TS8 623 aa11.39□□□□□ -0.59
ACTN1-203ENST00000394419 ZNF720Q7Z2F6 126 aa11.39□□□□□ -0.59
ACTN1-203ENST00000394419 CEP57Q86XR8 500 aa11.39□□□□□ -0.59
ACTN1-203ENST00000394419 SIAH1Q8IUQ4 282 aa11.39□□□□□ -0.59
ACTN1-203ENST00000394419 FAM84AQ96KN4 292 aa11.39□□□□□ -0.59
ACTN1-203ENST00000394419 WDR11Q9BZH6 1224 aa11.39□□□□□ -0.59
ACTN1-203ENST00000394419 MTRF1LQ9UGC7 380 aaKnown RBP11.39□□□□□ -0.59
ACTN1-203ENST00000394419 USTQ9Y2C2 406 aa11.39□□□□□ -0.59
ACTN1-203ENST00000394419 ALG6Q9Y672 507 aa11.39□□□□□ -0.59
ACTN1-203ENST00000394419 STK24Q9Y6E0 443 aa11.39□□□□□ -0.59
ACTN1-203ENST00000394419 NHSL1Q5SYE7 1610 aa11.39□□□□□ -0.59
ACTN1-203ENST00000394419 PHF20L1A8MW92 1017 aa11.39□□□□□ -0.59
ACTN1-203ENST00000394419 NPEPPSP55786 919 aa11.39□□□□□ -0.59
ACTN1-203ENST00000394419 SPIRE1Q08AE8 756 aa11.39□□□□□ -0.59
ACTN1-203ENST00000394419 BFSP1Q12934 665 aa11.39□□□□□ -0.59
ACTN1-203ENST00000394419 SF3B2Q13435 895 aaKnown RBP11.39□□□□□ -0.59
ACTN1-203ENST00000394419 GRIPAP1Q4V328 841 aa11.39□□□□□ -0.59
ACTN1-203ENST00000394419 MCTP2Q6DN12 878 aa11.39□□□□□ -0.59
ACTN1-203ENST00000394419 NT5DC3Q86UY8 548 aa11.39□□□□□ -0.59
ACTN1-203ENST00000394419 LENG9Q96B70 501 aa11.39□□□□□ -0.59
ACTN1-203ENST00000394419 ZNF653Q96CK0 615 aa11.39□□□□□ -0.59
ACTN1-203ENST00000394419 PAIP2Q9BPZ3 127 aaKnown RBP11.39□□□□□ -0.59
ACTN1-203ENST00000394419 TMEM39BQ9GZU3 492 aa11.39□□□□□ -0.59
ACTN1-203ENST00000394419 EPN3Q9H201 632 aa11.39□□□□□ -0.59
ACTN1-203ENST00000394419 TAOK3Q9H2K8 898 aa11.39□□□□□ -0.59
ACTN1-203ENST00000394419 MLXIPLQ9NP71 852 aa11.39□□□□□ -0.59
ACTN1-203ENST00000394419 RPS6KA5O75582 802 aa11.39□□□□□ -0.59
ACTN1-203ENST00000394419 CALCAP01258 141 aa11.39□□□□□ -0.59
ACTN1-203ENST00000394419 VAMP7P51809 220 aa11.39□□□□□ -0.59
ACTN1-203ENST00000394419 CALCOCO2Q13137 446 aa11.39□□□□□ -0.59
ACTN1-203ENST00000394419 BIRC3Q13489 604 aa11.39□□□□□ -0.59
ACTN1-203ENST00000394419 SCLT1Q96NL6 688 aa11.39□□□□□ -0.59
ACTN1-203ENST00000394419 POP1Q99575 1024 aaKnown RBP11.39□□□□□ -0.59
ACTN1-203ENST00000394419 POLR3CQ9BUI4 534 aaPredicted RBP11.39□□□□□ -0.59
ACTN1-203ENST00000394419 ZNF341Q9BYN7 854 aa11.39□□□□□ -0.59
ACTN1-203ENST00000394419 FAM114A2Q9NRY5 505 aa11.39□□□□□ -0.59
ACTN1-203ENST00000394419 MTUS1Q9ULD2 1270 aa11.39□□□□□ -0.59
ACTN1-203ENST00000394419 IGSF9BQ9UPX0 1349 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms