RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 CCDC12Q8WUD4 166 aaPredicted RBP17.36■□□□□ 0.37
CHMP3-202ENST00000393773 DISC1Q9NRI5 854 aa17.36■□□□□ 0.37
CHMP3-202ENST00000393773 GVINP1Q7Z2Y8 2422 aa17.36■□□□□ 0.37
CHMP3-202ENST00000393773 DMXL1Q9Y485 3027 aa17.35■□□□□ 0.37
CHMP3-202ENST00000393773 NT5C1B-RDH14C9J2C7 533 aa17.35■□□□□ 0.37
CHMP3-202ENST00000393773 MSH4O15457 936 aa17.35■□□□□ 0.37
CHMP3-202ENST00000393773 WEE2P0C1S8 567 aa17.35■□□□□ 0.37
CHMP3-202ENST00000393773 CPA1P15085 419 aa17.35■□□□□ 0.37
CHMP3-202ENST00000393773 MTHFRP42898 656 aa17.35■□□□□ 0.37
CHMP3-202ENST00000393773 TARBP2Q15633 366 aaKnown RBP17.35■□□□□ 0.37
CHMP3-202ENST00000393773 FEZF2Q8TBJ5 459 aa17.35■□□□□ 0.37
CHMP3-202ENST00000393773 BCL7CQ8WUZ0 217 aaPredicted RBP17.35■□□□□ 0.37
CHMP3-202ENST00000393773 NLRP7Q8WX94 980 aa17.35■□□□□ 0.37
CHMP3-202ENST00000393773 SCLT1Q96NL6 688 aa17.35■□□□□ 0.37
CHMP3-202ENST00000393773 CEP89Q96ST8 783 aa17.35■□□□□ 0.37
CHMP3-202ENST00000393773 DZANK1Q9NVP4 752 aa17.35■□□□□ 0.37
CHMP3-202ENST00000393773 DACT1Q9NYF0 836 aa17.35■□□□□ 0.37
CHMP3-202ENST00000393773 TDRD15B5MCY1 1934 aaKnown RBP17.35■□□□□ 0.37
CHMP3-202ENST00000393773 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.34■□□□□ 0.37
CHMP3-202ENST00000393773 CSDE1O75534 798 aaKnown RBP17.34■□□□□ 0.37
CHMP3-202ENST00000393773 FRYLO94915 3013 aa17.34■□□□□ 0.37
CHMP3-202ENST00000393773 PHKA2P46019 1235 aa17.34■□□□□ 0.37
CHMP3-202ENST00000393773 TBC1D8BQ0IIM8 1120 aa17.34■□□□□ 0.37
CHMP3-202ENST00000393773 KRT32Q14532 448 aa17.34■□□□□ 0.37
CHMP3-202ENST00000393773 RARS2Q5T160 578 aaKnown RBP17.34■□□□□ 0.37
CHMP3-202ENST00000393773 C12orf76Q8N812 135 aaPredicted RBP17.34■□□□□ 0.37
CHMP3-202ENST00000393773 TDRD5Q8NAT2 981 aaKnown RBP17.34■□□□□ 0.37
CHMP3-202ENST00000393773 DOCK8Q8NF50 2099 aa17.34■□□□□ 0.37
CHMP3-202ENST00000393773 AUTS2Q8WXX7 1259 aa17.34■□□□□ 0.37
CHMP3-202ENST00000393773 SLC5A5Q92911 643 aa17.34■□□□□ 0.37
CHMP3-202ENST00000393773 TMEM169Q96HH4 297 aa17.34■□□□□ 0.37
CHMP3-202ENST00000393773 RIT2Q99578 217 aa17.34■□□□□ 0.37
CHMP3-202ENST00000393773 TRAIPQ9BWF2 469 aa17.34■□□□□ 0.37
CHMP3-202ENST00000393773 UNC45AQ9H3U1 944 aa17.34■□□□□ 0.37
CHMP3-202ENST00000393773 NAP1L2Q9ULW6 460 aaPredicted RBP17.34■□□□□ 0.37
CHMP3-202ENST00000393773 IRAK3Q9Y616 596 aa17.34■□□□□ 0.37
CHMP3-202ENST00000393773 CCDC196A0A1B0GTZ2 297 aa17.33■□□□□ 0.36
CHMP3-202ENST00000393773 PRPF3O43395 683 aaKnown RBP17.33■□□□□ 0.36
CHMP3-202ENST00000393773 CHMP2AO43633 222 aa17.33■□□□□ 0.36
CHMP3-202ENST00000393773 ZC3H11AO75152 810 aaKnown RBP eCLIP17.33■□□□□ 0.36
CHMP3-202ENST00000393773 ASGR2P07307 311 aa17.33■□□□□ 0.36
CHMP3-202ENST00000393773 EPCAMP16422 314 aa17.33■□□□□ 0.36
CHMP3-202ENST00000393773 GNA11P29992 359 aa17.33■□□□□ 0.36
CHMP3-202ENST00000393773 CA8P35219 290 aa17.33■□□□□ 0.36
CHMP3-202ENST00000393773 ALDH7A1P49419 539 aaKnown RBP17.33■□□□□ 0.36
CHMP3-202ENST00000393773 JAK3P52333 1124 aa17.33■□□□□ 0.36
CHMP3-202ENST00000393773 KANK3Q6NY19 840 aa17.33■□□□□ 0.36
CHMP3-202ENST00000393773 SKAP1Q86WV1 359 aa17.33■□□□□ 0.36
CHMP3-202ENST00000393773 ZDHHC14Q8IZN3 488 aa17.33■□□□□ 0.36
CHMP3-202ENST00000393773 VPS52Q8N1B4 723 aa17.33■□□□□ 0.36
CHMP3-202ENST00000393773 SLC22A17Q8WUG5 538 aa17.33■□□□□ 0.36
CHMP3-202ENST00000393773 RSPH1Q8WYR4 309 aa17.33■□□□□ 0.36
CHMP3-202ENST00000393773 LPPQ93052 612 aa17.33■□□□□ 0.36
CHMP3-202ENST00000393773 PHKBQ93100 1093 aa17.33■□□□□ 0.36
CHMP3-202ENST00000393773 GJA10Q969M2 543 aa17.33■□□□□ 0.36
CHMP3-202ENST00000393773 VN1R3Q9BXE9 311 aa17.33■□□□□ 0.36
CHMP3-202ENST00000393773 NRBP2Q9NSY0 501 aa17.33■□□□□ 0.36
CHMP3-202ENST00000393773 PTPRZ1P23471 2315 aaPredicted RBP17.32■□□□□ 0.36
CHMP3-202ENST00000393773 MTCL1Q9Y4B5 1905 aaKnown RBP17.32■□□□□ 0.36
CHMP3-202ENST00000393773 IGKV6-21A0A0C4DH24 114 aa17.32■□□□□ 0.36
CHMP3-202ENST00000393773 TMEM150BA6NC51 233 aa17.32■□□□□ 0.36
CHMP3-202ENST00000393773 MEIS3P2A8K0S8 358 aa17.32■□□□□ 0.36
CHMP3-202ENST00000393773 B4GALT3O60512 393 aa17.32■□□□□ 0.36
CHMP3-202ENST00000393773 GAS7O60861 476 aa17.32■□□□□ 0.36
CHMP3-202ENST00000393773 STBD1O95210 358 aa17.32■□□□□ 0.36
CHMP3-202ENST00000393773 HMGB1P09429 215 aaKnown RBP17.32■□□□□ 0.36
CHMP3-202ENST00000393773 CTSAP10619 480 aa17.32■□□□□ 0.36
CHMP3-202ENST00000393773 SFNP31947 248 aa17.32■□□□□ 0.36
CHMP3-202ENST00000393773 NBL1P41271 181 aa17.32■□□□□ 0.36
CHMP3-202ENST00000393773 POLGP54098 1239 aaPredicted RBP17.32■□□□□ 0.36
CHMP3-202ENST00000393773 NTRK3Q16288 839 aa17.32■□□□□ 0.36
CHMP3-202ENST00000393773 LRCH2Q5VUJ6 765 aa17.32■□□□□ 0.36
CHMP3-202ENST00000393773 B3GNT9Q6UX72 402 aa17.32■□□□□ 0.36
CHMP3-202ENST00000393773 ASCL5Q7RTU5 278 aa17.32■□□□□ 0.36
CHMP3-202ENST00000393773 CCDC148Q8NFR7 591 aa17.32■□□□□ 0.36
CHMP3-202ENST00000393773 BICD2Q8TD16 824 aa17.32■□□□□ 0.36
CHMP3-202ENST00000393773 BRF1Q92994 677 aa17.32■□□□□ 0.36
CHMP3-202ENST00000393773 IGSF21Q96ID5 467 aa17.32■□□□□ 0.36
CHMP3-202ENST00000393773 CCDC136Q96JN2 1154 aa17.32■□□□□ 0.36
CHMP3-202ENST00000393773 TEKT3Q9BXF9 490 aa17.32■□□□□ 0.36
CHMP3-202ENST00000393773 CHST12Q9NRB3 414 aa17.32■□□□□ 0.36
CHMP3-202ENST00000393773 TBC1D13Q9NVG8 400 aa17.32■□□□□ 0.36
CHMP3-202ENST00000393773 SEPT9Q9UHD8 586 aaPredicted RBP17.32■□□□□ 0.36
CHMP3-202ENST00000393773 USTQ9Y2C2 406 aa17.32■□□□□ 0.36
CHMP3-202ENST00000393773 CACNA1AO00555 2505 aa17.32■□□□□ 0.36
CHMP3-202ENST00000393773 A0A087WZ62 844 aa17.31■□□□□ 0.36
CHMP3-202ENST00000393773 PRR23AA6NEV1 266 aa17.31■□□□□ 0.36
CHMP3-202ENST00000393773 PSMD10O75832 226 aa17.31■□□□□ 0.36
CHMP3-202ENST00000393773 CXCL14O95715 111 aa17.31■□□□□ 0.36
CHMP3-202ENST00000393773 MTERF2Q49AM1 385 aa17.31■□□□□ 0.36
CHMP3-202ENST00000393773 CWF19L1Q69YN2 538 aaKnown RBP17.31■□□□□ 0.36
CHMP3-202ENST00000393773 ASTLQ6HA08 431 aaPredicted RBP17.31■□□□□ 0.36
CHMP3-202ENST00000393773 Q6ZUG5 572 aa17.31■□□□□ 0.36
CHMP3-202ENST00000393773 DDX53Q86TM3 631 aaKnown RBP17.31■□□□□ 0.36
CHMP3-202ENST00000393773 KCNB2Q92953 911 aa17.31■□□□□ 0.36
CHMP3-202ENST00000393773 FDXACB1Q9BRP7 624 aaPredicted RBP17.31■□□□□ 0.36
CHMP3-202ENST00000393773 RNF26Q9BY78 433 aaPredicted RBP17.31■□□□□ 0.36
CHMP3-202ENST00000393773 NIFKQ9BYG3 293 aaKnown RBP17.31■□□□□ 0.36
CHMP3-202ENST00000393773 GCOM2Q9BZD3 368 aaPredicted RBP17.31■□□□□ 0.36
CHMP3-202ENST00000393773 NRDE2Q9H7Z3 1164 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms