RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 MORN1Q5T089 497 aa9.47□□□□□ -0.89
TDP1-203ENST00000393454 CYP4F22Q6NT55 531 aa9.47□□□□□ -0.89
TDP1-203ENST00000393454 RDH13Q8NBN7 331 aa9.47□□□□□ -0.89
TDP1-203ENST00000393454 AFG1LQ8WV93 481 aa9.47□□□□□ -0.89
TDP1-203ENST00000393454 CCDC51Q96ER9 411 aa9.47□□□□□ -0.89
TDP1-203ENST00000393454 KATNBL1Q9H079 304 aa9.47□□□□□ -0.89
TDP1-203ENST00000393454 DHX33Q9H6R0 707 aaKnown RBP9.47□□□□□ -0.89
TDP1-203ENST00000393454 SUGCTQ9HAC7 445 aa9.47□□□□□ -0.89
TDP1-203ENST00000393454 FAM207AQ9NSI2 230 aaPredicted RBP9.47□□□□□ -0.89
TDP1-203ENST00000393454 EMSYQ7Z589 1322 aa9.47□□□□□ -0.89
TDP1-203ENST00000393454 LRRIQ4A6NIV6 560 aa9.46□□□□□ -0.89
TDP1-203ENST00000393454 TISP43B9A030 160 aa9.46□□□□□ -0.89
TDP1-203ENST00000393454 TNPO2O14787 897 aaKnown RBP9.46□□□□□ -0.89
TDP1-203ENST00000393454 ARHGAP6O43182 974 aa9.46□□□□□ -0.89
TDP1-203ENST00000393454 AFPP02771 609 aaKnown RBP9.46□□□□□ -0.89
TDP1-203ENST00000393454 SMPD1P17405 629 aa9.46□□□□□ -0.89
TDP1-203ENST00000393454 RTP1P59025 263 aa9.46□□□□□ -0.89
TDP1-203ENST00000393454 PPP2R3AQ06190 1150 aa9.46□□□□□ -0.89
TDP1-203ENST00000393454 TARBP2Q15633 366 aaKnown RBP9.46□□□□□ -0.89
TDP1-203ENST00000393454 PRAMEF19Q5SWL8 479 aa9.46□□□□□ -0.89
TDP1-203ENST00000393454 RETREG2Q8NC44 543 aa9.46□□□□□ -0.89
TDP1-203ENST00000393454 ZNF397Q8NF99 534 aaPredicted RBP9.46□□□□□ -0.89
TDP1-203ENST00000393454 NEK11Q8NG66 645 aa9.46□□□□□ -0.89
TDP1-203ENST00000393454 ATP8B4Q8TF62 1192 aa9.46□□□□□ -0.89
TDP1-203ENST00000393454 HVCN1Q96D96 273 aa9.46□□□□□ -0.89
TDP1-203ENST00000393454 BICD1Q96G01 975 aa9.46□□□□□ -0.89
TDP1-203ENST00000393454 NTPCRQ9BSD7 190 aaKnown RBP9.46□□□□□ -0.89
TDP1-203ENST00000393454 CRACR2AQ9BSW2 395 aa9.46□□□□□ -0.89
TDP1-203ENST00000393454 ABHD10Q9NUJ1 306 aa9.46□□□□□ -0.89
TDP1-203ENST00000393454 SPTLC3Q9NUV7 552 aa9.46□□□□□ -0.89
TDP1-203ENST00000393454 CGNQ9P2M7 1197 aaKnown RBP9.46□□□□□ -0.89
TDP1-203ENST00000393454 KCNG1Q9UIX4 513 aa9.46□□□□□ -0.89
TDP1-203ENST00000393454 CAPN11Q9UMQ6 739 aa9.46□□□□□ -0.89
TDP1-203ENST00000393454 H0YCG3 227 aa9.46□□□□□ -0.9
TDP1-203ENST00000393454 MAFO75444 373 aaPredicted RBP9.46□□□□□ -0.9
TDP1-203ENST00000393454 GLRA2P23416 452 aa9.46□□□□□ -0.9
TDP1-203ENST00000393454 ARL2P36404 184 aa9.46□□□□□ -0.9
TDP1-203ENST00000393454 TM4SF4P48230 202 aa9.46□□□□□ -0.9
TDP1-203ENST00000393454 SLC26A2P50443 739 aa9.46□□□□□ -0.9
TDP1-203ENST00000393454 PPP2R5AQ15172 486 aa9.46□□□□□ -0.9
TDP1-203ENST00000393454 IQSEC1Q6DN90 963 aa9.46□□□□□ -0.9
TDP1-203ENST00000393454 TMEM139Q8IV31 216 aa9.46□□□□□ -0.9
TDP1-203ENST00000393454 CCAR2Q8N163 923 aaKnown RBP9.46□□□□□ -0.9
TDP1-203ENST00000393454 MSL3Q8N5Y2 521 aaKnown RBP9.46□□□□□ -0.9
TDP1-203ENST00000393454 OR6J1Q8NGC5 347 aa9.46□□□□□ -0.9
TDP1-203ENST00000393454 OR8K1Q8NGG5 319 aa9.46□□□□□ -0.9
TDP1-203ENST00000393454 DEPTORQ8TB45 409 aa9.46□□□□□ -0.9
TDP1-203ENST00000393454 ASAP3Q8TDY4 903 aa9.46□□□□□ -0.9
TDP1-203ENST00000393454 CBWD1Q9BRT8 395 aa9.46□□□□□ -0.9
TDP1-203ENST00000393454 LSM14BQ9BX40 385 aaKnown RBP9.46□□□□□ -0.9
TDP1-203ENST00000393454 NAA15Q9BXJ9 866 aaKnown RBP9.46□□□□□ -0.9
TDP1-203ENST00000393454 AGPAT5Q9NUQ2 364 aa9.46□□□□□ -0.9
TDP1-203ENST00000393454 DMAC2Q9NW81 257 aa9.46□□□□□ -0.9
TDP1-203ENST00000393454 ERAP1Q9NZ08 941 aa9.46□□□□□ -0.9
TDP1-203ENST00000393454 SIK3Q9Y2K2 1263 aa9.46□□□□□ -0.9
TDP1-203ENST00000393454 SOWAHDA6NJG2 315 aa9.45□□□□□ -0.9
TDP1-203ENST00000393454 RASSF10A6NK89 507 aa9.45□□□□□ -0.9
TDP1-203ENST00000393454 USP27XA6NNY8 438 aa9.45□□□□□ -0.9
TDP1-203ENST00000393454 ANKRD63C9JTQ0 380 aa9.45□□□□□ -0.9
TDP1-203ENST00000393454 CA12O43570 354 aa9.45□□□□□ -0.9
TDP1-203ENST00000393454 HBP1O60381 514 aa9.45□□□□□ -0.9
TDP1-203ENST00000393454 TOMM70O94826 608 aa9.45□□□□□ -0.9
TDP1-203ENST00000393454 LGALS2P05162 132 aa9.45□□□□□ -0.9
TDP1-203ENST00000393454 ZNF286BP0CG31 522 aa9.45□□□□□ -0.9
TDP1-203ENST00000393454 KRT13P13646 458 aa9.45□□□□□ -0.9
TDP1-203ENST00000393454 RGS2P41220 211 aa9.45□□□□□ -0.9
TDP1-203ENST00000393454 SNRPFP62306 86 aaKnown RBP9.45□□□□□ -0.9
TDP1-203ENST00000393454 IGBP1P78318 339 aa9.45□□□□□ -0.9
TDP1-203ENST00000393454 TNFAIP2Q03169 654 aa9.45□□□□□ -0.9
TDP1-203ENST00000393454 KCNMA1Q12791 1236 aa9.45□□□□□ -0.9
TDP1-203ENST00000393454 STRN3Q13033 797 aa9.45□□□□□ -0.9
TDP1-203ENST00000393454 MYBPC2Q14324 1141 aa9.45□□□□□ -0.9
TDP1-203ENST00000393454 DUSP28Q4G0W2 176 aa9.45□□□□□ -0.9
TDP1-203ENST00000393454 SLC9A9Q8IVB4 645 aa9.45□□□□□ -0.9
TDP1-203ENST00000393454 MAP4K3Q8IVH8 894 aa9.45□□□□□ -0.9
TDP1-203ENST00000393454 EXOC8Q8IYI6 725 aa9.45□□□□□ -0.9
TDP1-203ENST00000393454 XXYLT1Q8NBI6 393 aa9.45□□□□□ -0.9
TDP1-203ENST00000393454 PPTC7Q8NI37 304 aa9.45□□□□□ -0.9
TDP1-203ENST00000393454 TRAPPC12Q8WVT3 735 aa9.45□□□□□ -0.9
TDP1-203ENST00000393454 IQCDQ96DY2 449 aa9.45□□□□□ -0.9
TDP1-203ENST00000393454 HHIPL1Q96JK4 782 aa9.45□□□□□ -0.9
TDP1-203ENST00000393454 CEP89Q96ST8 783 aa9.45□□□□□ -0.9
TDP1-203ENST00000393454 MKNK1Q9BUB5 465 aa9.45□□□□□ -0.9
TDP1-203ENST00000393454 ZNHIT6Q9NWK9 470 aaKnown RBP9.45□□□□□ -0.9
TDP1-203ENST00000393454 HSPBP1Q9NZL4 362 aa9.45□□□□□ -0.9
TDP1-203ENST00000393454 PPME1Q9Y570 386 aa9.45□□□□□ -0.9
TDP1-203ENST00000393454 ADGRA3Q8IWK6 1321 aa9.45□□□□□ -0.9
TDP1-203ENST00000393454 ZNF236Q9UL36 1845 aa9.45□□□□□ -0.9
TDP1-203ENST00000393454 CNGA1P29973 690 aa9.44□□□□□ -0.9
TDP1-203ENST00000393454 CYP2C19P33261 490 aa9.44□□□□□ -0.9
TDP1-203ENST00000393454 ABCD1P33897 745 aa9.44□□□□□ -0.9
TDP1-203ENST00000393454 NAMPTP43490 491 aa9.44□□□□□ -0.9
TDP1-203ENST00000393454 ZBED6P86452 979 aa9.44□□□□□ -0.9
TDP1-203ENST00000393454 CCL14Q16627 93 aa9.44□□□□□ -0.9
TDP1-203ENST00000393454 FIGNQ5HY92 759 aa9.44□□□□□ -0.9
TDP1-203ENST00000393454 IER5Q5VY09 327 aa9.44□□□□□ -0.9
TDP1-203ENST00000393454 E4F1Q66K89 784 aaPredicted RBP9.44□□□□□ -0.9
TDP1-203ENST00000393454 CYP26C1Q6V0L0 522 aa9.44□□□□□ -0.9
TDP1-203ENST00000393454 CACNA2D4Q7Z3S7 1137 aa9.44□□□□□ -0.9
TDP1-203ENST00000393454 TMTC1Q8IUR5 882 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms