RNA–Protein interactions for RNA: ENST00000393158.6

PDGFD-202, Transcript of platelet derived growth factor D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDGFD, Length 3,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-202ENST00000393158 GAP43P17677 238 aa11.91□□□□□ -0.5
PDGFD-202ENST00000393158 BEX3Q00994 111 aa11.91□□□□□ -0.5
PDGFD-202ENST00000393158 LRRC63Q05C16 580 aa11.91□□□□□ -0.5
PDGFD-202ENST00000393158 EDRF1Q3B7T1 1238 aa11.91□□□□□ -0.5
PDGFD-202ENST00000393158 MAP4K3Q8IVH8 894 aa11.91□□□□□ -0.5
PDGFD-202ENST00000393158 OLIG1Q8TAK6 271 aa11.91□□□□□ -0.5
PDGFD-202ENST00000393158 SRRTQ9BXP5 876 aaKnown RBP11.91□□□□□ -0.5
PDGFD-202ENST00000393158 MSCO60682 206 aa11.91□□□□□ -0.5
PDGFD-202ENST00000393158 MNX1P50219 401 aaPredicted RBP11.91□□□□□ -0.5
PDGFD-202ENST00000393158 ARMCX5Q6P1M9 558 aa11.91□□□□□ -0.5
PDGFD-202ENST00000393158 NELFCDQ8IXH7 590 aa11.91□□□□□ -0.5
PDGFD-202ENST00000393158 OSBPL7Q9BZF2 842 aa11.91□□□□□ -0.5
PDGFD-202ENST00000393158 AGPAT3Q9NRZ7 376 aa11.91□□□□□ -0.5
PDGFD-202ENST00000393158 TSKSQ9UJT2 592 aa11.91□□□□□ -0.5
PDGFD-202ENST00000393158 PDXKO00764 312 aa11.91□□□□□ -0.5
PDGFD-202ENST00000393158 EPHB6O15197 1021 aa11.91□□□□□ -0.5
PDGFD-202ENST00000393158 INSRRP14616 1297 aa11.91□□□□□ -0.5
PDGFD-202ENST00000393158 KLK7P49862 253 aa11.91□□□□□ -0.5
PDGFD-202ENST00000393158 SLC26A2P50443 739 aa11.91□□□□□ -0.5
PDGFD-202ENST00000393158 ODR4Q5SWX8 454 aa11.91□□□□□ -0.5
PDGFD-202ENST00000393158 CRELD2Q6UXH1 353 aaPredicted RBP11.91□□□□□ -0.5
PDGFD-202ENST00000393158 TRIM59Q8IWR1 403 aa11.91□□□□□ -0.5
PDGFD-202ENST00000393158 CNPY4Q8N129 248 aa11.91□□□□□ -0.5
PDGFD-202ENST00000393158 CCDC155Q8N6L0 562 aa11.91□□□□□ -0.5
PDGFD-202ENST00000393158 MRPL44Q9H9J2 332 aaKnown RBP11.91□□□□□ -0.5
PDGFD-202ENST00000393158 PTPRHQ9HD43 1115 aa11.91□□□□□ -0.5
PDGFD-202ENST00000393158 WBP1LQ9NX94 342 aa11.91□□□□□ -0.5
PDGFD-202ENST00000393158 UBE4BO95155 1302 aa11.91□□□□□ -0.5
PDGFD-202ENST00000393158 KCNJ18B7U540 433 aa11.9□□□□□ -0.5
PDGFD-202ENST00000393158 SLC16A4O15374 487 aa11.9□□□□□ -0.5
PDGFD-202ENST00000393158 PROZP22891 400 aa11.9□□□□□ -0.5
PDGFD-202ENST00000393158 PEX3P56589 373 aa11.9□□□□□ -0.5
PDGFD-202ENST00000393158 KCNJ12Q14500 433 aa11.9□□□□□ -0.5
PDGFD-202ENST00000393158 SLC9A9Q8IVB4 645 aa11.9□□□□□ -0.5
PDGFD-202ENST00000393158 VSTM4Q8IW00 320 aa11.9□□□□□ -0.5
PDGFD-202ENST00000393158 C12orf56Q8IXR9 622 aa11.9□□□□□ -0.5
PDGFD-202ENST00000393158 MYCT1Q8N699 235 aa11.9□□□□□ -0.5
PDGFD-202ENST00000393158 FBXL18Q96ME1 805 aa11.9□□□□□ -0.5
PDGFD-202ENST00000393158 TMX1Q9H3N1 280 aa11.9□□□□□ -0.5
PDGFD-202ENST00000393158 SMARCAD1Q9H4L7 1026 aa11.9□□□□□ -0.5
PDGFD-202ENST00000393158 H3BRB1 525 aa11.9□□□□□ -0.5
PDGFD-202ENST00000393158 TRANK1O15050 2925 aa11.9□□□□□ -0.5
PDGFD-202ENST00000393158 PIGRP01833 764 aa11.9□□□□□ -0.5
PDGFD-202ENST00000393158 KCNMA1Q12791 1236 aa11.9□□□□□ -0.5
PDGFD-202ENST00000393158 COL4A6Q14031 1691 aa11.9□□□□□ -0.5
PDGFD-202ENST00000393158 LMBR1Q8WVP7 490 aa11.9□□□□□ -0.5
PDGFD-202ENST00000393158 POLR3FQ9H1D9 316 aaPredicted RBP11.9□□□□□ -0.5
PDGFD-202ENST00000393158 TUT1Q9H6E5 874 aaKnown RBP11.9□□□□□ -0.5
PDGFD-202ENST00000393158 ATP6V0A4Q9HBG4 840 aa11.9□□□□□ -0.5
PDGFD-202ENST00000393158 ERAP1Q9NZ08 941 aa11.9□□□□□ -0.5
PDGFD-202ENST00000393158 TBX20Q9UMR3 447 aa11.9□□□□□ -0.5
PDGFD-202ENST00000393158 SIK3Q9Y2K2 1263 aa11.9□□□□□ -0.5
PDGFD-202ENST00000393158 GPR32O75388 356 aa11.9□□□□□ -0.5
PDGFD-202ENST00000393158 CCDC173Q0VFZ6 552 aa11.9□□□□□ -0.5
PDGFD-202ENST00000393158 RUFY4Q6ZNE9 571 aa11.9□□□□□ -0.5
PDGFD-202ENST00000393158 HAUS6Q7Z4H7 955 aa11.9□□□□□ -0.5
PDGFD-202ENST00000393158 LRRC71Q8N4P6 559 aa11.9□□□□□ -0.5
PDGFD-202ENST00000393158 OR6J1Q8NGC5 347 aa11.9□□□□□ -0.5
PDGFD-202ENST00000393158 CBWD1Q9BRT8 395 aa11.9□□□□□ -0.5
PDGFD-202ENST00000393158 SMTNL1A8MU46 457 aa11.89□□□□□ -0.51
PDGFD-202ENST00000393158 B4DLN1 442 aa11.89□□□□□ -0.51
PDGFD-202ENST00000393158 DUSP11O75319 330 aaKnown RBP11.89□□□□□ -0.51
PDGFD-202ENST00000393158 PXYLP1Q8TE99 480 aa11.89□□□□□ -0.51
PDGFD-202ENST00000393158 ADAMTS10Q9H324 1103 aa11.89□□□□□ -0.51
PDGFD-202ENST00000393158 C17orf75Q9HAS0 396 aa11.89□□□□□ -0.51
PDGFD-202ENST00000393158 CDHR5Q9HBB8 845 aa11.89□□□□□ -0.51
PDGFD-202ENST00000393158 TYW1Q9NV66 732 aaKnown RBP11.89□□□□□ -0.51
PDGFD-202ENST00000393158 COL1A2P08123 1366 aa11.89□□□□□ -0.51
PDGFD-202ENST00000393158 LRRN2O75325 713 aa11.89□□□□□ -0.51
PDGFD-202ENST00000393158 NOL4O94818 638 aa11.89□□□□□ -0.51
PDGFD-202ENST00000393158 ZNF200P98182 395 aaPredicted RBP11.89□□□□□ -0.51
PDGFD-202ENST00000393158 MTHFD1LQ6UB35 978 aa11.89□□□□□ -0.51
PDGFD-202ENST00000393158 IFNLR1Q8IU57 520 aaPredicted RBP11.89□□□□□ -0.51
PDGFD-202ENST00000393158 KIAA0319LQ8IZA0 1049 aa11.89□□□□□ -0.51
PDGFD-202ENST00000393158 PRPF31Q8WWY3 499 aaKnown RBP11.89□□□□□ -0.51
PDGFD-202ENST00000393158 PSMA7O14818 248 aa11.89□□□□□ -0.51
PDGFD-202ENST00000393158 SEPT4O43236 478 aa11.89□□□□□ -0.51
PDGFD-202ENST00000393158 GCNT3O95395 438 aa11.89□□□□□ -0.51
PDGFD-202ENST00000393158 CST5P28325 142 aaPredicted RBP11.89□□□□□ -0.51
PDGFD-202ENST00000393158 FAM102BQ5T8I3 360 aa11.89□□□□□ -0.51
PDGFD-202ENST00000393158 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.89□□□□□ -0.51
PDGFD-202ENST00000393158 FAM178BQ8IXR5 827 aa11.89□□□□□ -0.51
PDGFD-202ENST00000393158 CSGALNACT2Q8N6G5 542 aa11.89□□□□□ -0.51
PDGFD-202ENST00000393158 CNOT6LQ96LI5 555 aaKnown RBP11.89□□□□□ -0.51
PDGFD-202ENST00000393158 DACH1Q9UI36 760 aa11.89□□□□□ -0.51
PDGFD-202ENST00000393158 TSC2P49815 1807 aa11.89□□□□□ -0.51
PDGFD-202ENST00000393158 LTBP2Q14767 1821 aa11.88□□□□□ -0.51
PDGFD-202ENST00000393158 DYNC1LI2O43237 492 aaPredicted RBP11.88□□□□□ -0.51
PDGFD-202ENST00000393158 RFC5P40937 340 aa11.88□□□□□ -0.51
PDGFD-202ENST00000393158 OTUD6AQ7L8S5 288 aa11.88□□□□□ -0.51
PDGFD-202ENST00000393158 LMO3Q8TAP4 145 aa11.88□□□□□ -0.51
PDGFD-202ENST00000393158 KIFAP3Q92845 792 aa11.88□□□□□ -0.51
PDGFD-202ENST00000393158 MPHOSPH6Q99547 160 aaKnown RBP11.88□□□□□ -0.51
PDGFD-202ENST00000393158 NFKBIZQ9BYH8 718 aa11.88□□□□□ -0.51
PDGFD-202ENST00000393158 PPME1Q9Y570 386 aa11.88□□□□□ -0.51
PDGFD-202ENST00000393158 GYPCP04921 128 aa11.88□□□□□ -0.51
PDGFD-202ENST00000393158 ADRB2P07550 413 aa11.88□□□□□ -0.51
PDGFD-202ENST00000393158 HSPA6P17066 643 aa11.88□□□□□ -0.51
PDGFD-202ENST00000393158 FECHP22830 423 aa11.88□□□□□ -0.51
PDGFD-202ENST00000393158 COPB1P53618 953 aaKnown RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms