RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 AMACRQ9UHK6 382 aa14.02□□□□□ -0.17
LCA5-202ENST00000392959 DCTN4Q9UJW0 460 aa14.02□□□□□ -0.17
LCA5-202ENST00000392959 ADGRL3Q9HAR2 1447 aa14.02□□□□□ -0.17
LCA5-202ENST00000392959 USP17L10C9JJH3 530 aa14.02□□□□□ -0.17
LCA5-202ENST00000392959 CALB1P05937 261 aa14.02□□□□□ -0.17
LCA5-202ENST00000392959 ASNSP08243 561 aa14.02□□□□□ -0.17
LCA5-202ENST00000392959 BAG6P46379 1132 aa14.02□□□□□ -0.17
LCA5-202ENST00000392959 PDCD2Q16342 344 aaPredicted RBP14.02□□□□□ -0.17
LCA5-202ENST00000392959 PASD1Q8IV76 773 aa14.02□□□□□ -0.17
LCA5-202ENST00000392959 ABTB1Q969K4 478 aaPredicted RBP14.02□□□□□ -0.17
LCA5-202ENST00000392959 ANLNQ9NQW6 1124 aa14.02□□□□□ -0.17
LCA5-202ENST00000392959 SLC12A6Q9UHW9 1150 aa14.02□□□□□ -0.17
LCA5-202ENST00000392959 KIF1BO60333 1816 aa14.01□□□□□ -0.17
LCA5-202ENST00000392959 UTYO14607 1347 aa14.01□□□□□ -0.17
LCA5-202ENST00000392959 CLDN3O15551 220 aa14.01□□□□□ -0.17
LCA5-202ENST00000392959 VAMP7P51809 220 aa14.01□□□□□ -0.17
LCA5-202ENST00000392959 SCARF1Q14162 830 aa14.01□□□□□ -0.17
LCA5-202ENST00000392959 ANKRD40Q6AI12 368 aa14.01□□□□□ -0.17
LCA5-202ENST00000392959 MORC4Q8TE76 937 aa14.01□□□□□ -0.17
LCA5-202ENST00000392959 TGS1Q96RS0 853 aaKnown RBP14.01□□□□□ -0.17
LCA5-202ENST00000392959 FAM96AQ9H5X1 160 aa14.01□□□□□ -0.17
LCA5-202ENST00000392959 VIPAS39Q9H9C1 493 aa14.01□□□□□ -0.17
LCA5-202ENST00000392959 MED14O60244 1454 aa14.01□□□□□ -0.17
LCA5-202ENST00000392959 PFASO15067 1338 aa14.01□□□□□ -0.17
LCA5-202ENST00000392959 TDP2O95551 362 aa14.01□□□□□ -0.17
LCA5-202ENST00000392959 GUCY1A2P33402 732 aa14.01□□□□□ -0.17
LCA5-202ENST00000392959 GUCY1A3Q02108 690 aa14.01□□□□□ -0.17
LCA5-202ENST00000392959 LRRC23Q53EV4 343 aaPredicted RBP14.01□□□□□ -0.17
LCA5-202ENST00000392959 TRIM9Q9C026 710 aa14.01□□□□□ -0.17
LCA5-202ENST00000392959 CCSER1Q9C0I3 900 aa14.01□□□□□ -0.17
LCA5-202ENST00000392959 CFAP73A6NFT4 308 aa14.01□□□□□ -0.17
LCA5-202ENST00000392959 GOLGA8MH3BSY2 632 aa14.01□□□□□ -0.17
LCA5-202ENST00000392959 FMR1Q06787 632 aaKnown RBP eCLIP14.01□□□□□ -0.17
LCA5-202ENST00000392959 MTMR1Q13613 665 aa14.01□□□□□ -0.17
LCA5-202ENST00000392959 LRRC14Q15048 493 aa14.01□□□□□ -0.17
LCA5-202ENST00000392959 SUPT20HL1Q3ZLR7 823 aa14.01□□□□□ -0.17
LCA5-202ENST00000392959 KLC3Q6P597 504 aa14.01□□□□□ -0.17
LCA5-202ENST00000392959 DYDC2Q96IM9 177 aa14.01□□□□□ -0.17
LCA5-202ENST00000392959 ISCA1Q9BUE6 129 aa14.01□□□□□ -0.17
LCA5-202ENST00000392959 INTS2Q9H0H0 1204 aaKnown RBP14.01□□□□□ -0.17
LCA5-202ENST00000392959 SUDS3Q9H7L9 328 aaPredicted RBP14.01□□□□□ -0.17
LCA5-202ENST00000392959 SLC16A4O15374 487 aa14□□□□□ -0.17
LCA5-202ENST00000392959 SLC4A1P02730 911 aa14□□□□□ -0.17
LCA5-202ENST00000392959 DHX34Q14147 1143 aaKnown RBP14□□□□□ -0.17
LCA5-202ENST00000392959 RASGRP2Q7LDG7 609 aa14□□□□□ -0.17
LCA5-202ENST00000392959 CCDC124Q96CT7 223 aaKnown RBP14□□□□□ -0.17
LCA5-202ENST00000392959 NRBF2Q96F24 287 aa14□□□□□ -0.17
LCA5-202ENST00000392959 WNT8AQ9H1J5 351 aa14□□□□□ -0.17
LCA5-202ENST00000392959 KRT82Q9NSB4 513 aa14□□□□□ -0.17
LCA5-202ENST00000392959 STRIP2Q9ULQ0 834 aa14□□□□□ -0.17
LCA5-202ENST00000392959 FNDC3AQ9Y2H6 1198 aaKnown RBP14□□□□□ -0.17
LCA5-202ENST00000392959 GSTA4O15217 222 aa14□□□□□ -0.17
LCA5-202ENST00000392959 LPXNO60711 386 aa14□□□□□ -0.17
LCA5-202ENST00000392959 ARFIP2P53365 341 aa14□□□□□ -0.17
LCA5-202ENST00000392959 CACNB3P54284 484 aa14□□□□□ -0.17
LCA5-202ENST00000392959 ARL13BQ3SXY8 428 aa14□□□□□ -0.17
LCA5-202ENST00000392959 FSCBQ5H9T9 825 aa14□□□□□ -0.17
LCA5-202ENST00000392959 RYBPQ8N488 228 aaPredicted RBP14□□□□□ -0.17
LCA5-202ENST00000392959 TBRG4Q969Z0 631 aaKnown RBP eCLIP14□□□□□ -0.17
LCA5-202ENST00000392959 TBC1D22BQ9NU19 505 aa14□□□□□ -0.17
LCA5-202ENST00000392959 WDR70Q9NW82 654 aa14□□□□□ -0.17
LCA5-202ENST00000392959 LCMT1Q9UIC8 334 aa14□□□□□ -0.17
LCA5-202ENST00000392959 ORC4O43929 436 aa14□□□□□ -0.17
LCA5-202ENST00000392959 RFX1P22670 979 aa14□□□□□ -0.17
LCA5-202ENST00000392959 CYP2C19P33261 490 aa14□□□□□ -0.17
LCA5-202ENST00000392959 INPP1P49441 399 aa14□□□□□ -0.17
LCA5-202ENST00000392959 FXR1P51114 621 aaKnown RBP eCLIP14□□□□□ -0.17
LCA5-202ENST00000392959 ZBTB17Q13105 803 aa14□□□□□ -0.17
LCA5-202ENST00000392959 C1orf146Q5VVC0 180 aa14□□□□□ -0.17
LCA5-202ENST00000392959 TRMT10CQ7L0Y3 403 aaKnown RBP14□□□□□ -0.17
LCA5-202ENST00000392959 SRLQ86TD4 932 aa14□□□□□ -0.17
LCA5-202ENST00000392959 LCA5Q86VQ0 697 aa14□□□□□ -0.17
LCA5-202ENST00000392959 PPM1NQ8N819 430 aa14□□□□□ -0.17
LCA5-202ENST00000392959 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14□□□□□ -0.17
LCA5-202ENST00000392959 TTC1Q99614 292 aa14□□□□□ -0.17
LCA5-202ENST00000392959 TUBE1Q9UJT0 475 aa14□□□□□ -0.17
LCA5-202ENST00000392959 HEY1Q9Y5J3 304 aa14□□□□□ -0.17
LCA5-202ENST00000392959 TYW5A2RUC4 315 aaKnown RBP14□□□□□ -0.17
LCA5-202ENST00000392959 DPY19L2Q6NUT2 758 aa14□□□□□ -0.17
LCA5-202ENST00000392959 OR6B3Q8NGW1 331 aa14□□□□□ -0.17
LCA5-202ENST00000392959 DHX38Q92620 1227 aaKnown RBP14□□□□□ -0.17
LCA5-202ENST00000392959 RUBCNQ92622 972 aa14□□□□□ -0.17
LCA5-202ENST00000392959 RNPC3Q96LT9 517 aaKnown RBP14□□□□□ -0.17
LCA5-202ENST00000392959 RMDN3Q96TC7 470 aa14□□□□□ -0.17
LCA5-202ENST00000392959 FAM213AQ9BRX8 229 aa14□□□□□ -0.17
LCA5-202ENST00000392959 CD209Q9NNX6 404 aa14□□□□□ -0.17
LCA5-202ENST00000392959 CHEK2O96017 543 aa13.99□□□□□ -0.17
LCA5-202ENST00000392959 TRIM49P0CI25 452 aa13.99□□□□□ -0.17
LCA5-202ENST00000392959 TRIM49CP0CI26 452 aa13.99□□□□□ -0.17
LCA5-202ENST00000392959 CDR2Q01850 454 aa13.99□□□□□ -0.17
LCA5-202ENST00000392959 PARP9Q8IXQ6 854 aa13.99□□□□□ -0.17
LCA5-202ENST00000392959 ZNF341Q9BYN7 854 aa13.99□□□□□ -0.17
LCA5-202ENST00000392959 ATP6V0A4Q9HBG4 840 aa13.99□□□□□ -0.17
LCA5-202ENST00000392959 ASNSD1Q9NWL6 643 aa13.99□□□□□ -0.17
LCA5-202ENST00000392959 PPME1Q9Y570 386 aa13.99□□□□□ -0.17
LCA5-202ENST00000392959 PNPLA7Q6ZV29 1317 aa13.99□□□□□ -0.17
LCA5-202ENST00000392959 USP42Q9H9J4 1324 aaKnown RBP13.99□□□□□ -0.17
LCA5-202ENST00000392959 PALLDQ8WX93 1383 aa13.99□□□□□ -0.17
LCA5-202ENST00000392959 DENND3A2RUS2 1198 aa13.99□□□□□ -0.17
LCA5-202ENST00000392959 NVLO15381 856 aaKnown RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms