RNA–Protein interactions for RNA: ENST00000390627.3

IGHV3-53-201, Transcript of immunoglobulin heavy variable 3-53, humanhuman

APPRIS P1 BASIC

Gene IGHV3-53, Length 571 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-53-201ENST00000390627 TIPINQ9BVW5 301 aa16.68■□□□□ 0.26
IGHV3-53-201ENST00000390627 TSPYL2Q9H2G4 693 aaPredicted RBP16.68■□□□□ 0.26
IGHV3-53-201ENST00000390627 IFT122Q9HBG6 1241 aa16.68■□□□□ 0.26
IGHV3-53-201ENST00000390627 GPRC5CQ9NQ84 441 aa16.68■□□□□ 0.26
IGHV3-53-201ENST00000390627 MSRAQ9UJ68 235 aa16.68■□□□□ 0.26
IGHV3-53-201ENST00000390627 DENND3A2RUS2 1198 aa16.67■□□□□ 0.26
IGHV3-53-201ENST00000390627 CUTAO60888 179 aa16.67■□□□□ 0.26
IGHV3-53-201ENST00000390627 PLA2G4BP0C869 781 aa16.67■□□□□ 0.26
IGHV3-53-201ENST00000390627 NCLP19338 710 aaKnown RBP16.67■□□□□ 0.26
IGHV3-53-201ENST00000390627 GLRA2P23416 452 aa16.67■□□□□ 0.26
IGHV3-53-201ENST00000390627 DNAJB2P25686 324 aa16.67■□□□□ 0.26
IGHV3-53-201ENST00000390627 DDIT3P35638 169 aa16.67■□□□□ 0.26
IGHV3-53-201ENST00000390627 CAPSQ13938 189 aa16.67■□□□□ 0.26
IGHV3-53-201ENST00000390627 PPP2R5AQ15172 486 aa16.67■□□□□ 0.26
IGHV3-53-201ENST00000390627 SYT2Q8N9I0 419 aaPredicted RBP16.67■□□□□ 0.26
IGHV3-53-201ENST00000390627 ZBED2Q9BTP6 218 aa16.67■□□□□ 0.26
IGHV3-53-201ENST00000390627 PBX4Q9BYU1 374 aa16.67■□□□□ 0.26
IGHV3-53-201ENST00000390627 TMX1Q9H3N1 280 aa16.67■□□□□ 0.26
IGHV3-53-201ENST00000390627 C1orf112Q9NSG2 853 aa16.67■□□□□ 0.26
IGHV3-53-201ENST00000390627 RNF216Q9NWF9 866 aaPredicted RBP16.67■□□□□ 0.26
IGHV3-53-201ENST00000390627 KCND2Q9NZV8 630 aa16.67■□□□□ 0.26
IGHV3-53-201ENST00000390627 PCDHA11Q9Y5I1 949 aa16.67■□□□□ 0.26
IGHV3-53-201ENST00000390627 TMEM265A0A087WTH1 108 aa16.66■□□□□ 0.26
IGHV3-53-201ENST00000390627 RBAK-RBAKDNI3L0D1 243 aa16.66■□□□□ 0.26
IGHV3-53-201ENST00000390627 ENPP3O14638 875 aa16.66■□□□□ 0.26
IGHV3-53-201ENST00000390627 TLL1O43897 1013 aa16.66■□□□□ 0.26
IGHV3-53-201ENST00000390627 GJB5O95377 273 aa16.66■□□□□ 0.26
IGHV3-53-201ENST00000390627 ZSCAN20P17040 1043 aaPredicted RBP16.66■□□□□ 0.26
IGHV3-53-201ENST00000390627 GUCY2CP25092 1073 aa16.66■□□□□ 0.26
IGHV3-53-201ENST00000390627 ME1P48163 572 aa16.66■□□□□ 0.26
IGHV3-53-201ENST00000390627 SLC12A3P55017 1021 aa16.66■□□□□ 0.26
IGHV3-53-201ENST00000390627 PTENP60484 403 aa16.66■□□□□ 0.26
IGHV3-53-201ENST00000390627 PCBP1Q15365 356 aaKnown RBP eCLIP16.66■□□□□ 0.26
IGHV3-53-201ENST00000390627 RINT1Q6NUQ1 792 aa16.66■□□□□ 0.26
IGHV3-53-201ENST00000390627 CCDC73Q6ZRK6 1079 aa16.66■□□□□ 0.26
IGHV3-53-201ENST00000390627 C1orf186Q6ZWK4 172 aa16.66■□□□□ 0.26
IGHV3-53-201ENST00000390627 USP49Q70CQ1 688 aa16.66■□□□□ 0.26
IGHV3-53-201ENST00000390627 CATSPER4Q7RTX7 472 aa16.66■□□□□ 0.26
IGHV3-53-201ENST00000390627 IFNLR1Q8IU57 520 aaPredicted RBP16.66■□□□□ 0.26
IGHV3-53-201ENST00000390627 LINC01599Q8WXQ3 324 aa16.66■□□□□ 0.26
IGHV3-53-201ENST00000390627 RAD54LQ92698 747 aa16.66■□□□□ 0.26
IGHV3-53-201ENST00000390627 TOP1MTQ969P6 601 aa16.66■□□□□ 0.26
IGHV3-53-201ENST00000390627 TIFAQ96CG3 184 aa16.66■□□□□ 0.26
IGHV3-53-201ENST00000390627 IFT74Q96LB3 600 aa16.66■□□□□ 0.26
IGHV3-53-201ENST00000390627 DRC1Q96MC2 740 aa16.66■□□□□ 0.26
IGHV3-53-201ENST00000390627 ADAM2Q99965 735 aa16.66■□□□□ 0.26
IGHV3-53-201ENST00000390627 RUSC1Q9BVN2 902 aa16.66■□□□□ 0.26
IGHV3-53-201ENST00000390627 NFKBIZQ9BYH8 718 aa16.66■□□□□ 0.26
IGHV3-53-201ENST00000390627 STK17AQ9UEE5 414 aa16.66■□□□□ 0.26
IGHV3-53-201ENST00000390627 LRRIQ4A6NIV6 560 aa16.65■□□□□ 0.26
IGHV3-53-201ENST00000390627 MGEA5O60502 916 aa16.65■□□□□ 0.26
IGHV3-53-201ENST00000390627 CSDE1O75534 798 aaKnown RBP16.65■□□□□ 0.26
IGHV3-53-201ENST00000390627 FGFR4P22455 802 aa16.65■□□□□ 0.26
IGHV3-53-201ENST00000390627 PBX2P40425 430 aa16.65■□□□□ 0.26
IGHV3-53-201ENST00000390627 NAMPTP43490 491 aa16.65■□□□□ 0.26
IGHV3-53-201ENST00000390627 RABGGTBP53611 331 aa16.65■□□□□ 0.26
IGHV3-53-201ENST00000390627 RRAGBQ5VZM2 374 aa16.65■□□□□ 0.26
IGHV3-53-201ENST00000390627 ZBTB8OSQ8IWT0 167 aa16.65■□□□□ 0.26
IGHV3-53-201ENST00000390627 LARP4BQ92615 738 aaKnown RBP16.65■□□□□ 0.26
IGHV3-53-201ENST00000390627 SPATA32Q96LK8 384 aa16.65■□□□□ 0.26
IGHV3-53-201ENST00000390627 CHST12Q9NRB3 414 aa16.65■□□□□ 0.26
IGHV3-53-201ENST00000390627 RGS18Q9NS28 235 aa16.65■□□□□ 0.26
IGHV3-53-201ENST00000390627 BLOC1S4Q9NUP1 217 aa16.65■□□□□ 0.26
IGHV3-53-201ENST00000390627 DACT1Q9NYF0 836 aa16.65■□□□□ 0.26
IGHV3-53-201ENST00000390627 RCOR1Q9UKL0 485 aa16.65■□□□□ 0.26
IGHV3-53-201ENST00000390627 PTPRSQ13332 1948 aa16.64■□□□□ 0.26
IGHV3-53-201ENST00000390627 INO80B-WBP1J3KQ70 363 aa16.64■□□□□ 0.25
IGHV3-53-201ENST00000390627 HIP1RO75146 1068 aa16.64■□□□□ 0.25
IGHV3-53-201ENST00000390627 ERLIN2O94905 339 aa16.64■□□□□ 0.25
IGHV3-53-201ENST00000390627 STAG3L1P0CL83 205 aa16.64■□□□□ 0.25
IGHV3-53-201ENST00000390627 STAT6P42226 847 aa16.64■□□□□ 0.25
IGHV3-53-201ENST00000390627 SARSP49591 514 aaKnown RBP16.64■□□□□ 0.25
IGHV3-53-201ENST00000390627 DSC3Q14574 896 aa16.64■□□□□ 0.25
IGHV3-53-201ENST00000390627 ZNF697Q5TEC3 545 aa16.64■□□□□ 0.25
IGHV3-53-201ENST00000390627 FAM117BQ6P1L5 589 aa16.64■□□□□ 0.25
IGHV3-53-201ENST00000390627 SLC24A5Q71RS6 500 aa16.64■□□□□ 0.25
IGHV3-53-201ENST00000390627 TMCO2Q7Z6W1 182 aaPredicted RBP16.64■□□□□ 0.25
IGHV3-53-201ENST00000390627 RTN4RL1Q86UN2 441 aaPredicted RBP16.64■□□□□ 0.25
IGHV3-53-201ENST00000390627 NPAS4Q8IUM7 802 aa16.64■□□□□ 0.25
IGHV3-53-201ENST00000390627 DEPTORQ8TB45 409 aa16.64■□□□□ 0.25
IGHV3-53-201ENST00000390627 RAD9AQ99638 391 aa16.64■□□□□ 0.25
IGHV3-53-201ENST00000390627 SCAND2PQ9GZW5 306 aaPredicted RBP16.64■□□□□ 0.25
IGHV3-53-201ENST00000390627 C2orf40Q9H1Z8 148 aa16.64■□□□□ 0.25
IGHV3-53-201ENST00000390627 C17orf75Q9HAS0 396 aa16.64■□□□□ 0.25
IGHV3-53-201ENST00000390627 AGPAT5Q9NUQ2 364 aa16.64■□□□□ 0.25
IGHV3-53-201ENST00000390627 CIZ1Q9ULV3 898 aaPredicted RBP16.64■□□□□ 0.25
IGHV3-53-201ENST00000390627 PIN4Q9Y237 131 aaKnown RBP16.64■□□□□ 0.25
IGHV3-53-201ENST00000390627 INSL6Q9Y581 213 aa16.64■□□□□ 0.25
IGHV3-53-201ENST00000390627 C9IYK1 514 aa16.63■□□□□ 0.25
IGHV3-53-201ENST00000390627 UPP2O95045 317 aa16.63■□□□□ 0.25
IGHV3-53-201ENST00000390627 NCBP1Q09161 790 aaKnown RBP16.63■□□□□ 0.25
IGHV3-53-201ENST00000390627 DMP1Q13316 513 aaPredicted RBP16.63■□□□□ 0.25
IGHV3-53-201ENST00000390627 MCM6Q14566 821 aa16.63■□□□□ 0.25
IGHV3-53-201ENST00000390627 AXDND1Q5T1B0 1012 aaPredicted RBP16.63■□□□□ 0.25
IGHV3-53-201ENST00000390627 CDCA2Q69YH5 1023 aaPredicted RBP16.63■□□□□ 0.25
IGHV3-53-201ENST00000390627 GPBP1Q86WP2 473 aa16.63■□□□□ 0.25
IGHV3-53-201ENST00000390627 LRRC15Q8TF66 581 aa16.63■□□□□ 0.25
IGHV3-53-201ENST00000390627 LEO1Q8WVC0 666 aaPredicted RBP16.63■□□□□ 0.25
IGHV3-53-201ENST00000390627 BSNDQ8WZ55 320 aa16.63■□□□□ 0.25
IGHV3-53-201ENST00000390627 YME1L1Q96TA2 773 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 208.9 ms