RNA–Protein interactions for RNA: ENST00000390009.7

ACTN4-202, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-202ENST00000390009 HDAC6Q9UBN7 1215 aa19.86■□□□□ 0.77
ACTN4-202ENST00000390009 EPHX2P34913 555 aa19.85■□□□□ 0.77
ACTN4-202ENST00000390009 SMTNP53814 917 aa19.85■□□□□ 0.77
ACTN4-202ENST00000390009 PRKCEQ02156 737 aa19.85■□□□□ 0.77
ACTN4-202ENST00000390009 DMP1Q13316 513 aaPredicted RBP19.85■□□□□ 0.77
ACTN4-202ENST00000390009 CBWD6Q4V339 395 aa19.85■□□□□ 0.77
ACTN4-202ENST00000390009 CBWD3Q5JTY5 395 aa19.85■□□□□ 0.77
ACTN4-202ENST00000390009 CBWD5Q5RIA9 395 aa19.85■□□□□ 0.77
ACTN4-202ENST00000390009 PAPD7Q5XG87 772 aaKnown RBP19.85■□□□□ 0.77
ACTN4-202ENST00000390009 IRF2BP2Q7Z5L9 587 aa19.85■□□□□ 0.77
ACTN4-202ENST00000390009 TRIM58Q8NG06 486 aa19.85■□□□□ 0.77
ACTN4-202ENST00000390009 ZC3H15Q8WU90 426 aaKnown RBP19.85■□□□□ 0.77
ACTN4-202ENST00000390009 PAGR1Q9BTK6 254 aa19.85■□□□□ 0.77
ACTN4-202ENST00000390009 ASCC2Q9H1I8 757 aaPredicted RBP19.85■□□□□ 0.77
ACTN4-202ENST00000390009 MLXIPQ9HAP2 919 aa19.85■□□□□ 0.77
ACTN4-202ENST00000390009 SEPT9Q9UHD8 586 aaPredicted RBP19.85■□□□□ 0.77
ACTN4-202ENST00000390009 AJAP1Q9UKB5 411 aaPredicted RBP19.85■□□□□ 0.77
ACTN4-202ENST00000390009 CAPN6Q9Y6Q1 641 aa19.85■□□□□ 0.77
ACTN4-202ENST00000390009 ANO9A1A5B4 782 aa19.85■□□□□ 0.77
ACTN4-202ENST00000390009 CCDC169A6NNP5 214 aa19.85■□□□□ 0.77
ACTN4-202ENST00000390009 NPTX2P47972 431 aa19.85■□□□□ 0.77
ACTN4-202ENST00000390009 JAM2P57087 298 aa19.85■□□□□ 0.77
ACTN4-202ENST00000390009 GJB7Q6PEY0 223 aa19.85■□□□□ 0.77
ACTN4-202ENST00000390009 GPR161Q8N6U8 529 aaKnown RBP19.85■□□□□ 0.77
ACTN4-202ENST00000390009 TMEM161BQ8NDZ6 487 aa19.85■□□□□ 0.77
ACTN4-202ENST00000390009 RABGGTAQ92696 567 aa19.85■□□□□ 0.77
ACTN4-202ENST00000390009 KIFAP3Q92845 792 aa19.85■□□□□ 0.77
ACTN4-202ENST00000390009 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.85■□□□□ 0.77
ACTN4-202ENST00000390009 SAR1BQ9Y6B6 198 aa19.85■□□□□ 0.77
ACTN4-202ENST00000390009 IGSF9BQ9UPX0 1349 aa19.84■□□□□ 0.77
ACTN4-202ENST00000390009 A0A087X0T9 212 aa19.84■□□□□ 0.77
ACTN4-202ENST00000390009 TACC1O75410 805 aa19.84■□□□□ 0.77
ACTN4-202ENST00000390009 SUPT20HL2P0C7V6 817 aa19.84■□□□□ 0.77
ACTN4-202ENST00000390009 FAM228BP0C875 321 aa19.84■□□□□ 0.77
ACTN4-202ENST00000390009 KRT13P13646 458 aa19.84■□□□□ 0.77
ACTN4-202ENST00000390009 SNRPFP62306 86 aaKnown RBP19.84■□□□□ 0.77
ACTN4-202ENST00000390009 IQCEQ6IPM2 695 aa19.84■□□□□ 0.77
ACTN4-202ENST00000390009 SEPT14Q6ZU15 432 aa19.84■□□□□ 0.77
ACTN4-202ENST00000390009 INTS8Q75QN2 995 aaKnown RBP19.84■□□□□ 0.77
ACTN4-202ENST00000390009 CYFIP1Q7L576 1253 aa19.84■□□□□ 0.77
ACTN4-202ENST00000390009 CCDC94Q9BW85 323 aaPredicted RBP19.84■□□□□ 0.77
ACTN4-202ENST00000390009 EPC1Q9H2F5 836 aa19.84■□□□□ 0.77
ACTN4-202ENST00000390009 C17orf75Q9HAS0 396 aa19.84■□□□□ 0.77
ACTN4-202ENST00000390009 LUC7LQ9NQ29 371 aaKnown RBP19.84■□□□□ 0.77
ACTN4-202ENST00000390009 HSPBP1Q9NZL4 362 aa19.84■□□□□ 0.77
ACTN4-202ENST00000390009 ADAMTS1Q9UHI8 967 aa19.84■□□□□ 0.77
ACTN4-202ENST00000390009 KCNH4Q9UQ05 1017 aa19.84■□□□□ 0.77
ACTN4-202ENST00000390009 BZW2Q9Y6E2 419 aaKnown RBP19.84■□□□□ 0.77
ACTN4-202ENST00000390009 LRRC37A2A6NM11 1700 aa19.84■□□□□ 0.77
ACTN4-202ENST00000390009 POTEB2H3BUK9 544 aa19.84■□□□□ 0.77
ACTN4-202ENST00000390009 DGAT1O75907 488 aa19.84■□□□□ 0.77
ACTN4-202ENST00000390009 MOCS3O95396 460 aa19.84■□□□□ 0.77
ACTN4-202ENST00000390009 SOX10P56693 466 aa19.84■□□□□ 0.77
ACTN4-202ENST00000390009 MYL7Q01449 175 aa19.84■□□□□ 0.77
ACTN4-202ENST00000390009 PTK2Q05397 1052 aa19.84■□□□□ 0.77
ACTN4-202ENST00000390009 XXYLT1Q8NBI6 393 aa19.84■□□□□ 0.77
ACTN4-202ENST00000390009 BSNDQ8WZ55 320 aa19.84■□□□□ 0.77
ACTN4-202ENST00000390009 KIFC3Q9BVG8 833 aa19.84■□□□□ 0.77
ACTN4-202ENST00000390009 KMT5AQ9NQR1 393 aa19.84■□□□□ 0.77
ACTN4-202ENST00000390009 CYP26B1Q9NR63 512 aa19.84■□□□□ 0.77
ACTN4-202ENST00000390009 TBX20Q9UMR3 447 aa19.84■□□□□ 0.77
ACTN4-202ENST00000390009 AGTPBP1Q9UPW5 1226 aa19.84■□□□□ 0.77
ACTN4-202ENST00000390009 SOWAHBA6NEL2 793 aa19.83■□□□□ 0.77
ACTN4-202ENST00000390009 CNMDO75829 334 aa19.83■□□□□ 0.77
ACTN4-202ENST00000390009 PPIL2Q13356 520 aa19.83■□□□□ 0.77
ACTN4-202ENST00000390009 MCPH1Q8NEM0 835 aa19.83■□□□□ 0.77
ACTN4-202ENST00000390009 HVCN1Q96D96 273 aa19.83■□□□□ 0.77
ACTN4-202ENST00000390009 PDLIM7Q9NR12 457 aa19.83■□□□□ 0.77
ACTN4-202ENST00000390009 SALL4Q9UJQ4 1053 aa19.83■□□□□ 0.77
ACTN4-202ENST00000390009 EXOC7Q9UPT5 735 aa19.83■□□□□ 0.77
ACTN4-202ENST00000390009 CTAGE15A4D2H0 777 aa19.82■□□□□ 0.76
ACTN4-202ENST00000390009 CTAGE8P0CG41 777 aa19.82■□□□□ 0.76
ACTN4-202ENST00000390009 EDNRBP24530 442 aa19.82■□□□□ 0.76
ACTN4-202ENST00000390009 PRKCIP41743 596 aa19.82■□□□□ 0.76
ACTN4-202ENST00000390009 XKR3Q5GH77 459 aa19.82■□□□□ 0.76
ACTN4-202ENST00000390009 ZNF571Q7Z3V5 609 aaPredicted RBP19.82■□□□□ 0.76
ACTN4-202ENST00000390009 CTAGE6Q86UF2 777 aa19.82■□□□□ 0.76
ACTN4-202ENST00000390009 MAP4K3Q8IVH8 894 aa19.82■□□□□ 0.76
ACTN4-202ENST00000390009 CTAGE4Q8IX94 777 aa19.82■□□□□ 0.76
ACTN4-202ENST00000390009 ANKRD13CQ8N6S4 541 aa19.82■□□□□ 0.76
ACTN4-202ENST00000390009 ZNF526Q8TF50 670 aaPredicted RBP19.82■□□□□ 0.76
ACTN4-202ENST00000390009 SPIRE2Q8WWL2 714 aa19.82■□□□□ 0.76
ACTN4-202ENST00000390009 NTPCRQ9BSD7 190 aaKnown RBP19.82■□□□□ 0.76
ACTN4-202ENST00000390009 SYNGAP1Q96PV0 1343 aa19.82■□□□□ 0.76
ACTN4-202ENST00000390009 DENND3A2RUS2 1198 aa19.82■□□□□ 0.76
ACTN4-202ENST00000390009 ATG7O95352 703 aa19.82■□□□□ 0.76
ACTN4-202ENST00000390009 ZSCAN20P17040 1043 aaPredicted RBP19.82■□□□□ 0.76
ACTN4-202ENST00000390009 CLCN6P51797 869 aa19.82■□□□□ 0.76
ACTN4-202ENST00000390009 DLG4P78352 724 aa19.82■□□□□ 0.76
ACTN4-202ENST00000390009 ZSWIM2Q8NEG5 633 aa19.82■□□□□ 0.76
ACTN4-202ENST00000390009 OPTNQ96CV9 577 aa19.82■□□□□ 0.76
ACTN4-202ENST00000390009 ALS2CR12Q96Q35 445 aa19.82■□□□□ 0.76
ACTN4-202ENST00000390009 INTS2Q9H0H0 1204 aaKnown RBP19.82■□□□□ 0.76
ACTN4-202ENST00000390009 ATP6V0A4Q9HBG4 840 aa19.82■□□□□ 0.76
ACTN4-202ENST00000390009 XPNPEP1Q9NQW7 623 aa19.82■□□□□ 0.76
ACTN4-202ENST00000390009 PRDM4Q9UKN5 801 aa19.82■□□□□ 0.76
ACTN4-202ENST00000390009 JRKLQ9Y4A0 524 aa19.82■□□□□ 0.76
ACTN4-202ENST00000390009 MAPK13O15264 365 aa19.81■□□□□ 0.76
ACTN4-202ENST00000390009 SRGAP2O75044 1071 aa19.81■□□□□ 0.76
ACTN4-202ENST00000390009 VAMP7P51809 220 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms