RNA–Protein interactions for RNA: ENST00000389995.4

SOD1-202, Transcript of superoxide dismutase 1, humanhuman

TSL 3 BASIC

Gene SOD1, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-202ENST00000389995 ACSF2Q96CM8 615 aaPredicted RBP13.4□□□□□ -0.26
SOD1-202ENST00000389995 HINFPQ9BQA5 517 aa13.4□□□□□ -0.26
SOD1-202ENST00000389995 VN1R3Q9BXE9 311 aa13.4□□□□□ -0.26
SOD1-202ENST00000389995 DZANK1Q9NVP4 752 aa13.4□□□□□ -0.26
SOD1-202ENST00000389995 CA14Q9ULX7 337 aa13.4□□□□□ -0.26
SOD1-202ENST00000389995 DUSP12Q9UNI6 340 aa13.4□□□□□ -0.26
SOD1-202ENST00000389995 TDRD15B5MCY1 1934 aaKnown RBP13.39□□□□□ -0.27
SOD1-202ENST00000389995 MEIS3P2A8K0S8 358 aa13.39□□□□□ -0.27
SOD1-202ENST00000389995 FAM86B1E9PN63 330 aa13.39□□□□□ -0.27
SOD1-202ENST00000389995 ADAMTS3O15072 1205 aa13.39□□□□□ -0.27
SOD1-202ENST00000389995 N4BP1O75113 896 aaKnown RBP13.39□□□□□ -0.27
SOD1-202ENST00000389995 FAM86B2P0C5J1 330 aa13.39□□□□□ -0.27
SOD1-202ENST00000389995 EIF4BP23588 611 aaKnown RBP13.39□□□□□ -0.27
SOD1-202ENST00000389995 NAPAP54920 295 aa13.39□□□□□ -0.27
SOD1-202ENST00000389995 MIS18BP1Q6P0N0 1132 aa13.39□□□□□ -0.27
SOD1-202ENST00000389995 CASC1Q6TDU7 716 aa13.39□□□□□ -0.27
SOD1-202ENST00000389995 CCDC149Q6ZUS6 474 aa13.39□□□□□ -0.27
SOD1-202ENST00000389995 TMTC3Q6ZXV5 915 aa13.39□□□□□ -0.27
SOD1-202ENST00000389995 GPR149Q86SP6 731 aa13.39□□□□□ -0.27
SOD1-202ENST00000389995 PLA2G4DQ86XP0 818 aa13.39□□□□□ -0.27
SOD1-202ENST00000389995 BBXQ8WY36 941 aaPredicted RBP13.39□□□□□ -0.27
SOD1-202ENST00000389995 RTP3Q9BQQ7 232 aa13.39□□□□□ -0.27
SOD1-202ENST00000389995 GBP3Q9H0R5 595 aa13.39□□□□□ -0.27
SOD1-202ENST00000389995 RIC8AQ9NPQ8 531 aa13.39□□□□□ -0.27
SOD1-202ENST00000389995 DNAJB4Q9UDY4 337 aa13.39□□□□□ -0.27
SOD1-202ENST00000389995 PATJQ8NI35 1801 aa13.39□□□□□ -0.27
SOD1-202ENST00000389995 A0A0U1RQF3 1178 aa13.38□□□□□ -0.27
SOD1-202ENST00000389995 B4GALT3O60512 393 aa13.38□□□□□ -0.27
SOD1-202ENST00000389995 DCNP07585 359 aaKnown RBP13.38□□□□□ -0.27
SOD1-202ENST00000389995 CTSAP10619 480 aa13.38□□□□□ -0.27
SOD1-202ENST00000389995 CHMLP26374 656 aa13.38□□□□□ -0.27
SOD1-202ENST00000389995 ADCY7P51828 1080 aa13.38□□□□□ -0.27
SOD1-202ENST00000389995 OTOP3Q7RTS5 596 aa13.38□□□□□ -0.27
SOD1-202ENST00000389995 MICU3Q86XE3 530 aa13.38□□□□□ -0.27
SOD1-202ENST00000389995 FANCBQ8NB91 859 aa13.38□□□□□ -0.27
SOD1-202ENST00000389995 IGSF21Q96ID5 467 aa13.38□□□□□ -0.27
SOD1-202ENST00000389995 SCLT1Q96NL6 688 aa13.38□□□□□ -0.27
SOD1-202ENST00000389995 CNTNAP3BQ96NU0 1288 aa13.38□□□□□ -0.27
SOD1-202ENST00000389995 CNTNAP3Q9BZ76 1288 aa13.38□□□□□ -0.27
SOD1-202ENST00000389995 NRDE2Q9H7Z3 1164 aa13.38□□□□□ -0.27
SOD1-202ENST00000389995 GABBR1Q9UBS5 961 aa13.38□□□□□ -0.27
SOD1-202ENST00000389995 INPP5FQ9Y2H2 1132 aa13.38□□□□□ -0.27
SOD1-202ENST00000389995 MAFBQ9Y5Q3 323 aaPredicted RBP13.38□□□□□ -0.27
SOD1-202ENST00000389995 RBM8AQ9Y5S9 174 aaKnown RBP13.38□□□□□ -0.27
SOD1-202ENST00000389995 ZFHX4Q86UP3 3567 aa13.38□□□□□ -0.27
SOD1-202ENST00000389995 CHD6Q8TD26 2715 aa13.38□□□□□ -0.27
SOD1-202ENST00000389995 IGLV3-22A0A075B6J6 115 aa13.37□□□□□ -0.27
SOD1-202ENST00000389995 IPO5O00410 1097 aaKnown RBP13.37□□□□□ -0.27
SOD1-202ENST00000389995 RFX1P22670 979 aa13.37□□□□□ -0.27
SOD1-202ENST00000389995 SREBF1P36956 1147 aa13.37□□□□□ -0.27
SOD1-202ENST00000389995 GPC3P51654 580 aa13.37□□□□□ -0.27
SOD1-202ENST00000389995 DRP2Q13474 957 aa13.37□□□□□ -0.27
SOD1-202ENST00000389995 BMS1Q14692 1282 aaKnown RBP13.37□□□□□ -0.27
SOD1-202ENST00000389995 PTPN14Q15678 1187 aa13.37□□□□□ -0.27
SOD1-202ENST00000389995 LETM2Q2VYF4 491 aa13.37□□□□□ -0.27
SOD1-202ENST00000389995 TTC22Q5TAA0 569 aa13.37□□□□□ -0.27
SOD1-202ENST00000389995 JAKMIP3Q5VZ66 844 aa13.37□□□□□ -0.27
SOD1-202ENST00000389995 FAM43BQ6ZT52 329 aaPredicted RBP13.37□□□□□ -0.27
SOD1-202ENST00000389995 DDX53Q86TM3 631 aaKnown RBP13.37□□□□□ -0.27
SOD1-202ENST00000389995 LINC01465Q8N7H1 131 aa13.37□□□□□ -0.27
SOD1-202ENST00000389995 MAP7D2Q96T17 732 aa13.37□□□□□ -0.27
SOD1-202ENST00000389995 SFXN1Q9H9B4 322 aa13.37□□□□□ -0.27
SOD1-202ENST00000389995 SLC12A7Q9Y666 1083 aa13.37□□□□□ -0.27
SOD1-202ENST00000389995 CNTNAP5Q8WYK1 1306 aa13.37□□□□□ -0.27
SOD1-202ENST00000389995 SMCO2A6NFE2 343 aa13.36□□□□□ -0.27
SOD1-202ENST00000389995 GALTP07902 379 aa13.36□□□□□ -0.27
SOD1-202ENST00000389995 CNPP09543 421 aaKnown RBP13.36□□□□□ -0.27
SOD1-202ENST00000389995 DARSP14868 501 aaKnown RBP13.36□□□□□ -0.27
SOD1-202ENST00000389995 KLRC2P26717 231 aa13.36□□□□□ -0.27
SOD1-202ENST00000389995 GBP2P32456 591 aaPredicted RBP13.36□□□□□ -0.27
SOD1-202ENST00000389995 MCM5P33992 734 aa13.36□□□□□ -0.27
SOD1-202ENST00000389995 SLC11A1P49279 550 aa13.36□□□□□ -0.27
SOD1-202ENST00000389995 CLCN4P51793 760 aa13.36□□□□□ -0.27
SOD1-202ENST00000389995 PUM1Q14671 1186 aaKnown RBP eCLIP13.36□□□□□ -0.272e-7■□□□□ 9.4
SOD1-202ENST00000389995 ZNF280BQ86YH2 543 aa13.36□□□□□ -0.27
SOD1-202ENST00000389995 NLRP7Q8WX94 980 aa13.36□□□□□ -0.27
SOD1-202ENST00000389995 RUFY2Q8WXA3 655 aa13.36□□□□□ -0.27
SOD1-202ENST00000389995 MAP4K1Q92918 833 aa13.36□□□□□ -0.27
SOD1-202ENST00000389995 KLHL5Q96PQ7 755 aa13.36□□□□□ -0.27
SOD1-202ENST00000389995 ZNF577Q9BSK1 485 aa13.36□□□□□ -0.27
SOD1-202ENST00000389995 MRPL9Q9BYD2 267 aaKnown RBP13.36□□□□□ -0.27
SOD1-202ENST00000389995 TBC1D17Q9HA65 648 aa13.36□□□□□ -0.27
SOD1-202ENST00000389995 TBC1D13Q9NVG8 400 aa13.36□□□□□ -0.27
SOD1-202ENST00000389995 IRAK3Q9Y616 596 aa13.36□□□□□ -0.27
SOD1-202ENST00000389995 POTEMA6NI47 508 aa13.35□□□□□ -0.27
SOD1-202ENST00000389995 C2CD2LO14523 706 aa13.35□□□□□ -0.27
SOD1-202ENST00000389995 MAGEB2O15479 319 aa13.35□□□□□ -0.27
SOD1-202ENST00000389995 SGSM2O43147 1006 aa13.35□□□□□ -0.27
SOD1-202ENST00000389995 ZNF862O60290 1169 aa13.35□□□□□ -0.27
SOD1-202ENST00000389995 FOSP01100 380 aaPredicted RBP13.35□□□□□ -0.27
SOD1-202ENST00000389995 SP9P0CG40 484 aa13.35□□□□□ -0.27
SOD1-202ENST00000389995 CALM1P0DP23 149 aa13.35□□□□□ -0.27
SOD1-202ENST00000389995 CALM2P0DP24 149 aa13.35□□□□□ -0.27
SOD1-202ENST00000389995 CALM3P0DP25 149 aa13.35□□□□□ -0.27
SOD1-202ENST00000389995 PHKA2P46019 1235 aa13.35□□□□□ -0.27
SOD1-202ENST00000389995 CLK2P49760 499 aaKnown RBP13.35□□□□□ -0.27
SOD1-202ENST00000389995 AFF1P51825 1210 aaKnown RBP13.35□□□□□ -0.27
SOD1-202ENST00000389995 POLGP54098 1239 aaPredicted RBP13.35□□□□□ -0.27
SOD1-202ENST00000389995 RNASELQ05823 741 aaKnown RBP13.35□□□□□ -0.27
SOD1-202ENST00000389995 UGCGQ16739 394 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms