RNA–Protein interactions for RNA: ENST00000389757.7

PKP4-201, Transcript of plakophilin 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKP4, Length 5,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-201ENST00000389757 MOCS3O95396 460 aa11.03□□□□□ -0.64
PKP4-201ENST00000389757 IL1R1P14778 569 aa11.03□□□□□ -0.64
PKP4-201ENST00000389757 NFKBIAP25963 317 aa11.03□□□□□ -0.64
PKP4-201ENST00000389757 GCLCP48506 637 aaPredicted RBP11.03□□□□□ -0.64
PKP4-201ENST00000389757 TPD52P55327 224 aaPredicted RBP11.03□□□□□ -0.64
PKP4-201ENST00000389757 GNASQ5JWF2 1037 aa11.03□□□□□ -0.64
PKP4-201ENST00000389757 TXNRD3Q86VQ6 643 aa11.03□□□□□ -0.64
PKP4-201ENST00000389757 PGBD4Q96DM1 585 aa11.03□□□□□ -0.64
PKP4-201ENST00000389757 PBKQ96KB5 322 aa11.03□□□□□ -0.64
PKP4-201ENST00000389757 RIT2Q99578 217 aa11.03□□□□□ -0.64
PKP4-201ENST00000389757 LMCD1Q9NZU5 365 aa11.03□□□□□ -0.64
PKP4-201ENST00000389757 MROH2AA6NES4 1674 aa11.03□□□□□ -0.64
PKP4-201ENST00000389757 CALB1P05937 261 aa11.03□□□□□ -0.64
PKP4-201ENST00000389757 PRR29P0C7W0 189 aa11.03□□□□□ -0.64
PKP4-201ENST00000389757 CPB1P15086 417 aa11.03□□□□□ -0.64
PKP4-201ENST00000389757 FGFR2P21802 821 aa11.03□□□□□ -0.64
PKP4-201ENST00000389757 BACE1P56817 501 aa11.03□□□□□ -0.64
PKP4-201ENST00000389757 CYP27A1Q02318 531 aa11.03□□□□□ -0.64
PKP4-201ENST00000389757 NBPF9Q3BBW0 867 aa11.03□□□□□ -0.64
PKP4-201ENST00000389757 TMEM143Q96AN5 459 aa11.03□□□□□ -0.64
PKP4-201ENST00000389757 VPS33BQ9H267 617 aa11.03□□□□□ -0.64
PKP4-201ENST00000389757 FAM114A2Q9NRY5 505 aa11.03□□□□□ -0.64
PKP4-201ENST00000389757 MAP3K20Q9NYL2 800 aaKnown RBP11.03□□□□□ -0.64
PKP4-201ENST00000389757 UBE4BO95155 1302 aa11.03□□□□□ -0.64
PKP4-201ENST00000389757 A8MXQ7 604 aa11.03□□□□□ -0.64
PKP4-201ENST00000389757 SLC26A4O43511 780 aa11.03□□□□□ -0.64
PKP4-201ENST00000389757 TRAPPC3O43617 180 aa11.03□□□□□ -0.64
PKP4-201ENST00000389757 BNIP3LO60238 219 aa11.03□□□□□ -0.64
PKP4-201ENST00000389757 DDNO94850 711 aaPredicted RBP11.03□□□□□ -0.64
PKP4-201ENST00000389757 SLC4A1P02730 911 aa11.03□□□□□ -0.64
PKP4-201ENST00000389757 RFC5P40937 340 aa11.03□□□□□ -0.64
PKP4-201ENST00000389757 LLGL1Q15334 1064 aa11.03□□□□□ -0.64
PKP4-201ENST00000389757 CCDC62Q6P9F0 684 aa11.03□□□□□ -0.64
PKP4-201ENST00000389757 DDX23Q9BUQ8 820 aaKnown RBP11.03□□□□□ -0.64
PKP4-201ENST00000389757 RNF14Q9UBS8 474 aa11.03□□□□□ -0.64
PKP4-201ENST00000389757 CPP00450 1065 aa11.03□□□□□ -0.64
PKP4-201ENST00000389757 ICAM1P05362 532 aa11.03□□□□□ -0.64
PKP4-201ENST00000389757 RPS6P62753 249 aaKnown RBP11.03□□□□□ -0.64
PKP4-201ENST00000389757 PDE1BQ01064 536 aa11.03□□□□□ -0.64
PKP4-201ENST00000389757 LAMC2Q13753 1193 aa11.03□□□□□ -0.64
PKP4-201ENST00000389757 DGKDQ16760 1214 aa11.03□□□□□ -0.64
PKP4-201ENST00000389757 RNF219Q5W0B1 726 aaPredicted RBP11.03□□□□□ -0.64
PKP4-201ENST00000389757 SHC4Q6S5L8 630 aa11.03□□□□□ -0.64
PKP4-201ENST00000389757 CCHCR1Q8TD31 782 aa11.03□□□□□ -0.64
PKP4-201ENST00000389757 MGARPQ8TDB4 240 aa11.03□□□□□ -0.64
PKP4-201ENST00000389757 ACER1Q8TDN7 264 aa11.03□□□□□ -0.64
PKP4-201ENST00000389757 RTFDC1Q9BY42 306 aaPredicted RBP11.03□□□□□ -0.64
PKP4-201ENST00000389757 ZWILCHQ9H900 591 aa11.03□□□□□ -0.64
PKP4-201ENST00000389757 ERAP1Q9NZ08 941 aa11.03□□□□□ -0.64
PKP4-201ENST00000389757 CNOT8Q9UFF9 292 aaKnown RBP11.03□□□□□ -0.64
PKP4-201ENST00000389757 CNTNAP5Q8WYK1 1306 aa11.03□□□□□ -0.64
PKP4-201ENST00000389757 M0QYV0 167 aa11.03□□□□□ -0.64
PKP4-201ENST00000389757 MFAP3LO75121 409 aa11.03□□□□□ -0.64
PKP4-201ENST00000389757 CPT1AP50416 773 aa11.03□□□□□ -0.64
PKP4-201ENST00000389757 RPS6KA2Q15349 733 aa11.03□□□□□ -0.64
PKP4-201ENST00000389757 B4GALNT4Q76KP1 1039 aa11.03□□□□□ -0.64
PKP4-201ENST00000389757 GANCQ8TET4 914 aa11.03□□□□□ -0.64
PKP4-201ENST00000389757 KAZALD1Q96I82 304 aa11.03□□□□□ -0.64
PKP4-201ENST00000389757 MOV10L1Q9BXT6 1211 aaKnown RBP11.03□□□□□ -0.64
PKP4-201ENST00000389757 EHD4Q9H223 541 aa11.03□□□□□ -0.64
PKP4-201ENST00000389757 LCMT1Q9UIC8 334 aa11.03□□□□□ -0.64
PKP4-201ENST00000389757 ASAP2O43150 1006 aa11.02□□□□□ -0.64
PKP4-201ENST00000389757 INHBAP08476 426 aa11.02□□□□□ -0.64
PKP4-201ENST00000389757 BASP1P80723 227 aaKnown RBP11.02□□□□□ -0.64
PKP4-201ENST00000389757 VEPH1Q14D04 833 aa11.02□□□□□ -0.64
PKP4-201ENST00000389757 LRRC31Q6UY01 552 aa11.02□□□□□ -0.64
PKP4-201ENST00000389757 ENOSF1Q7L5Y1 443 aa11.02□□□□□ -0.64
PKP4-201ENST00000389757 RNF180Q86T96 592 aa11.02□□□□□ -0.64
PKP4-201ENST00000389757 VSIG1Q86XK7 387 aa11.02□□□□□ -0.64
PKP4-201ENST00000389757 ZMYND12Q9H0C1 365 aa11.02□□□□□ -0.64
PKP4-201ENST00000389757 INTS2Q9H0H0 1204 aaKnown RBP11.02□□□□□ -0.64
PKP4-201ENST00000389757 CACYBPQ9HB71 228 aaKnown RBP11.02□□□□□ -0.64
PKP4-201ENST00000389757 KCND2Q9NZV8 630 aa11.02□□□□□ -0.64
PKP4-201ENST00000389757 FBXO2Q9UK22 296 aaPredicted RBP11.02□□□□□ -0.64
PKP4-201ENST00000389757 STAP1Q9ULZ2 295 aa11.02□□□□□ -0.64
PKP4-201ENST00000389757 ZBED1O96006 694 aa11.02□□□□□ -0.65
PKP4-201ENST00000389757 S100BP04271 92 aaPredicted RBP11.02□□□□□ -0.65
PKP4-201ENST00000389757 GSTA1P08263 222 aa11.02□□□□□ -0.65
PKP4-201ENST00000389757 GSTA2P09210 222 aa11.02□□□□□ -0.65
PKP4-201ENST00000389757 NMT1P30419 496 aaKnown RBP11.02□□□□□ -0.65
PKP4-201ENST00000389757 PRKCEQ02156 737 aa11.02□□□□□ -0.65
PKP4-201ENST00000389757 TSTA3Q13630 321 aaPredicted RBP11.02□□□□□ -0.65
PKP4-201ENST00000389757 ANKRD20A3Q5VUR7 823 aa11.02□□□□□ -0.65
PKP4-201ENST00000389757 PASD1Q8IV76 773 aa11.02□□□□□ -0.65
PKP4-201ENST00000389757 UHMK1Q8TAS1 419 aaKnown RBP11.02□□□□□ -0.65
PKP4-201ENST00000389757 PPP2R3CQ969Q6 453 aa11.02□□□□□ -0.65
PKP4-201ENST00000389757 FBXO28Q9NVF7 368 aa11.02□□□□□ -0.65
PKP4-201ENST00000389757 FAM205CA6NFA0 338 aa11.02□□□□□ -0.65
PKP4-201ENST00000389757 RECQLP46063 649 aaPredicted RBP11.02□□□□□ -0.65
PKP4-201ENST00000389757 RWDD2BP57060 319 aa11.02□□□□□ -0.65
PKP4-201ENST00000389757 PPARDQ03181 441 aa11.02□□□□□ -0.65
PKP4-201ENST00000389757 EMC2Q15006 297 aa11.02□□□□□ -0.65
PKP4-201ENST00000389757 PPP6R3Q5H9R7 873 aaPredicted RBP11.02□□□□□ -0.65
PKP4-201ENST00000389757 HSPH1Q92598 858 aa11.02□□□□□ -0.65
PKP4-201ENST00000389757 GLT1D1Q96MS3 346 aa11.02□□□□□ -0.65
PKP4-201ENST00000389757 RILPQ96NA2 401 aa11.02□□□□□ -0.65
PKP4-201ENST00000389757 ASNSD1Q9NWL6 643 aa11.02□□□□□ -0.65
PKP4-201ENST00000389757 MKRN1Q9UHC7 482 aaKnown RBP11.02□□□□□ -0.65
PKP4-201ENST00000389757 PDXKO00764 312 aa11.02□□□□□ -0.65
PKP4-201ENST00000389757 CYP2C9P11712 490 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms