RNA–Protein interactions for RNA: ENST00000389413.7

PTPRN2-201, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 1 (best) BASIC

Gene PTPRN2, Length 4,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-201ENST00000389413 CENPUQ71F23 418 aa17.3■□□□□ 0.36
PTPRN2-201ENST00000389413 AGPAT1Q99943 283 aa17.3■□□□□ 0.36
PTPRN2-201ENST00000389413 GGPS1O95749 300 aa17.3■□□□□ 0.36
PTPRN2-201ENST00000389413 LDHAP00338 332 aaKnown RBP17.3■□□□□ 0.36
PTPRN2-201ENST00000389413 RPSAP08865 295 aaKnown RBP17.3■□□□□ 0.36
PTPRN2-201ENST00000389413 SLC9A1P19634 815 aa17.3■□□□□ 0.36
PTPRN2-201ENST00000389413 KLRC1P26715 233 aa17.3■□□□□ 0.36
PTPRN2-201ENST00000389413 PAPD7Q5XG87 772 aaKnown RBP17.3■□□□□ 0.36
PTPRN2-201ENST00000389413 PRR5LQ6MZQ0 368 aa17.3■□□□□ 0.36
PTPRN2-201ENST00000389413 CRAMP1Q96RY5 1269 aa17.3■□□□□ 0.36
PTPRN2-201ENST00000389413 NYAP2Q9P242 653 aa17.3■□□□□ 0.36
PTPRN2-201ENST00000389413 ARHGAP42A6NI28 874 aa17.3■□□□□ 0.36
PTPRN2-201ENST00000389413 MED7O43513 233 aa17.3■□□□□ 0.36
PTPRN2-201ENST00000389413 LUC7L3O95232 432 aaKnown RBP17.3■□□□□ 0.36
PTPRN2-201ENST00000389413 MDH1P40925 334 aaKnown RBP17.3■□□□□ 0.36
PTPRN2-201ENST00000389413 CDK17Q00537 523 aa17.3■□□□□ 0.36
PTPRN2-201ENST00000389413 GRB10Q13322 594 aa17.3■□□□□ 0.36
PTPRN2-201ENST00000389413 TBC1D1Q86TI0 1168 aaPredicted RBP17.3■□□□□ 0.36
PTPRN2-201ENST00000389413 AFAP1L2Q8N4X5 818 aa17.3■□□□□ 0.36
PTPRN2-201ENST00000389413 NXF1Q9UBU9 619 aaKnown RBP17.3■□□□□ 0.36
PTPRN2-201ENST00000389413 TJP3O95049 919 aa17.3■□□□□ 0.36
PTPRN2-201ENST00000389413 MT-ND3P03897 115 aa17.3■□□□□ 0.36
PTPRN2-201ENST00000389413 ANKS1AQ92625 1134 aa17.3■□□□□ 0.36
PTPRN2-201ENST00000389413 HEMGNQ9BXL5 484 aa17.3■□□□□ 0.36
PTPRN2-201ENST00000389413 DENND3A2RUS2 1198 aa17.29■□□□□ 0.36
PTPRN2-201ENST00000389413 CHUKO15111 745 aa17.29■□□□□ 0.36
PTPRN2-201ENST00000389413 BASP1P80723 227 aaKnown RBP17.29■□□□□ 0.36
PTPRN2-201ENST00000389413 EARS2Q5JPH6 523 aaKnown RBP17.29■□□□□ 0.36
PTPRN2-201ENST00000389413 CCDC125Q86Z20 511 aa17.29■□□□□ 0.36
PTPRN2-201ENST00000389413 LRRN4CLQ8ND94 238 aa17.29■□□□□ 0.36
PTPRN2-201ENST00000389413 CARSP49589 748 aaKnown RBP17.29■□□□□ 0.36
PTPRN2-201ENST00000389413 GEN1Q17RS7 908 aa17.29■□□□□ 0.36
PTPRN2-201ENST00000389413 LRIG3Q6UXM1 1119 aa17.29■□□□□ 0.36
PTPRN2-201ENST00000389413 ARHGAP27Q6ZUM4 889 aa17.29■□□□□ 0.36
PTPRN2-201ENST00000389413 TTC16Q8NEE8 873 aa17.29■□□□□ 0.36
PTPRN2-201ENST00000389413 CDKL2Q92772 493 aa17.29■□□□□ 0.36
PTPRN2-201ENST00000389413 CALN1Q9BXU9 219 aa17.29■□□□□ 0.36
PTPRN2-201ENST00000389413 MYO5BQ9ULV0 1848 aa17.29■□□□□ 0.36
PTPRN2-201ENST00000389413 TRIM42Q8IWZ5 723 aa17.29■□□□□ 0.36
PTPRN2-201ENST00000389413 CHMP6Q96FZ7 201 aa17.29■□□□□ 0.36
PTPRN2-201ENST00000389413 RBM41Q96IZ5 413 aaKnown RBP17.29■□□□□ 0.36
PTPRN2-201ENST00000389413 PITPNM3Q9BZ71 974 aa17.29■□□□□ 0.36
PTPRN2-201ENST00000389413 EPN3Q9H201 632 aa17.29■□□□□ 0.36
PTPRN2-201ENST00000389413 APEX2Q9UBZ4 518 aa17.29■□□□□ 0.36
PTPRN2-201ENST00000389413 FMO5P49326 533 aa17.29■□□□□ 0.36
PTPRN2-201ENST00000389413 IRAK1P51617 712 aa17.29■□□□□ 0.36
PTPRN2-201ENST00000389413 SESN3P58005 492 aa17.29■□□□□ 0.36
PTPRN2-201ENST00000389413 SURF1Q15526 300 aa17.29■□□□□ 0.36
PTPRN2-201ENST00000389413 PDIK1LQ8N165 341 aa17.29■□□□□ 0.36
PTPRN2-201ENST00000389413 CFAP61Q8NHU2 1237 aa17.29■□□□□ 0.36
PTPRN2-201ENST00000389413 SLC35G2Q8TBE7 412 aa17.29■□□□□ 0.36
PTPRN2-201ENST00000389413 LACRTQ9GZZ8 138 aa17.29■□□□□ 0.36
PTPRN2-201ENST00000389413 DUSP10Q9Y6W6 482 aa17.29■□□□□ 0.36
PTPRN2-201ENST00000389413 A6NJR5 290 aa17.28■□□□□ 0.36
PTPRN2-201ENST00000389413 SFNP31947 248 aa17.28■□□□□ 0.36
PTPRN2-201ENST00000389413 HAUS6Q7Z4H7 955 aa17.28■□□□□ 0.36
PTPRN2-201ENST00000389413 EXOC8Q8IYI6 725 aa17.28■□□□□ 0.36
PTPRN2-201ENST00000389413 TTI1O43156 1089 aa17.28■□□□□ 0.36
PTPRN2-201ENST00000389413 MYBP10242 640 aa17.28■□□□□ 0.36
PTPRN2-201ENST00000389413 RPA1P27694 616 aa17.28■□□□□ 0.36
PTPRN2-201ENST00000389413 MDM2Q00987 491 aaPredicted RBP17.28■□□□□ 0.36
PTPRN2-201ENST00000389413 ZBTB33Q86T24 672 aa17.28■□□□□ 0.36
PTPRN2-201ENST00000389413 ERICH1Q86X53 443 aa17.28■□□□□ 0.36
PTPRN2-201ENST00000389413 KCTD6Q8NC69 237 aa17.28■□□□□ 0.36
PTPRN2-201ENST00000389413 PYROXD1Q8WU10 500 aa17.28■□□□□ 0.36
PTPRN2-201ENST00000389413 SAYSD1Q9NPB0 183 aa17.28■□□□□ 0.36
PTPRN2-201ENST00000389413 HERC5Q9UII4 1024 aaKnown RBP17.28■□□□□ 0.36
PTPRN2-201ENST00000389413 BCS1LQ9Y276 419 aa17.28■□□□□ 0.36
PTPRN2-201ENST00000389413 FAM205AQ6ZU69 1335 aa17.28■□□□□ 0.36
PTPRN2-201ENST00000389413 MYO3BQ8WXR4 1341 aa17.28■□□□□ 0.36
PTPRN2-201ENST00000389413 RAD51CO43502 376 aa17.28■□□□□ 0.36
PTPRN2-201ENST00000389413 SLC37A4O43826 429 aa17.28■□□□□ 0.36
PTPRN2-201ENST00000389413 NDUFB10O96000 172 aa17.28■□□□□ 0.36
PTPRN2-201ENST00000389413 KRT14P02533 472 aa17.28■□□□□ 0.36
PTPRN2-201ENST00000389413 PRLRP16471 622 aa17.28■□□□□ 0.36
PTPRN2-201ENST00000389413 HERVK_113P62684 666 aa17.28■□□□□ 0.36
PTPRN2-201ENST00000389413 NBPF9Q3BBW0 867 aa17.28■□□□□ 0.36
PTPRN2-201ENST00000389413 BBS9Q3SYG4 887 aa17.28■□□□□ 0.36
PTPRN2-201ENST00000389413 GADL1Q6ZQY3 521 aa17.28■□□□□ 0.36
PTPRN2-201ENST00000389413 USP38Q8NB14 1042 aa17.28■□□□□ 0.36
PTPRN2-201ENST00000389413 SMC1BQ8NDV3 1235 aa17.28■□□□□ 0.36
PTPRN2-201ENST00000389413 FAM213AQ9BRX8 229 aa17.28■□□□□ 0.36
PTPRN2-201ENST00000389413 ATP6V0A4Q9HBG4 840 aa17.28■□□□□ 0.36
PTPRN2-201ENST00000389413 IFT122Q9HBG6 1241 aa17.28■□□□□ 0.36
PTPRN2-201ENST00000389413 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.28■□□□□ 0.362e-6■■■□□ 15.1
PTPRN2-201ENST00000389413 IGBP1P78318 339 aa17.28■□□□□ 0.36
PTPRN2-201ENST00000389413 PDZD4Q76G19 769 aaPredicted RBP17.28■□□□□ 0.36
PTPRN2-201ENST00000389413 RAB3IL1Q8TBN0 382 aa17.28■□□□□ 0.36
PTPRN2-201ENST00000389413 HVCN1Q96D96 273 aa17.28■□□□□ 0.36
PTPRN2-201ENST00000389413 ZIM3Q96PE6 472 aa17.28■□□□□ 0.36
PTPRN2-201ENST00000389413 CNTNAP4Q9C0A0 1308 aa17.28■□□□□ 0.36
PTPRN2-201ENST00000389413 MEFVO15553 781 aaPredicted RBP17.27■□□□□ 0.36
PTPRN2-201ENST00000389413 SLC10A5Q5PT55 438 aa17.27■□□□□ 0.36
PTPRN2-201ENST00000389413 CENPPQ6IPU0 288 aa17.27■□□□□ 0.36
PTPRN2-201ENST00000389413 DARS2Q6PI48 645 aaKnown RBP17.27■□□□□ 0.36
PTPRN2-201ENST00000389413 TRIM59Q8IWR1 403 aa17.27■□□□□ 0.36
PTPRN2-201ENST00000389413 RTKN2Q8IZC4 609 aa17.27■□□□□ 0.36
PTPRN2-201ENST00000389413 SCYL3Q8IZE3 742 aa17.27■□□□□ 0.36
PTPRN2-201ENST00000389413 RAVER2Q9HCJ3 691 aaKnown RBP17.27■□□□□ 0.36
PTPRN2-201ENST00000389413 RASA4BC9J798 803 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms