RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 SPATA20Q8TB22 786 aa14.1□□□□□ -0.15
TRAPPC9-201ENST00000389328 NUP85Q9BW27 656 aa14.1□□□□□ -0.15
TRAPPC9-201ENST00000389328 CDCA7Q9BWT1 371 aaPredicted RBP14.1□□□□□ -0.15
TRAPPC9-201ENST00000389328 GYG2O15488 501 aa14.1□□□□□ -0.15
TRAPPC9-201ENST00000389328 SMIM5Q71RC9 77 aa14.1□□□□□ -0.15
TRAPPC9-201ENST00000389328 ADGRF4Q8IZF3 695 aa14.1□□□□□ -0.15
TRAPPC9-201ENST00000389328 ZNF507Q8TCN5 953 aa14.1□□□□□ -0.15
TRAPPC9-201ENST00000389328 FAM196BA6NMK8 535 aa14.1□□□□□ -0.15
TRAPPC9-201ENST00000389328 ANP32DO95626 131 aa14.1□□□□□ -0.15
TRAPPC9-201ENST00000389328 ATP2B4P23634 1241 aa14.1□□□□□ -0.15
TRAPPC9-201ENST00000389328 SERPINB6P35237 376 aa14.1□□□□□ -0.15
TRAPPC9-201ENST00000389328 BBS9Q3SYG4 887 aa14.1□□□□□ -0.15
TRAPPC9-201ENST00000389328 MEI1Q5TIA1 1274 aa14.1□□□□□ -0.15
TRAPPC9-201ENST00000389328 TBC1D9BQ66K14 1250 aa14.1□□□□□ -0.15
TRAPPC9-201ENST00000389328 BARGINQ6ZT62 677 aa14.1□□□□□ -0.15
TRAPPC9-201ENST00000389328 RFX8Q6ZV50 586 aa14.1□□□□□ -0.15
TRAPPC9-201ENST00000389328 NEDD1Q8NHV4 660 aa14.1□□□□□ -0.15
TRAPPC9-201ENST00000389328 MED15Q96RN5 788 aa14.1□□□□□ -0.15
TRAPPC9-201ENST00000389328 GOLGA8SH3BPF8 625 aa14.09□□□□□ -0.15
TRAPPC9-201ENST00000389328 GOLGA8MH3BSY2 632 aa14.09□□□□□ -0.15
TRAPPC9-201ENST00000389328 HNRNPDLO14979 420 aaKnown RBP14.09□□□□□ -0.15
TRAPPC9-201ENST00000389328 SLC37A4O43826 429 aa14.09□□□□□ -0.15
TRAPPC9-201ENST00000389328 ANKRD20A8PQ5CZ79 823 aa14.09□□□□□ -0.15
TRAPPC9-201ENST00000389328 ZKSCAN4Q969J2 545 aaPredicted RBP14.09□□□□□ -0.15
TRAPPC9-201ENST00000389328 C9orf72Q96LT7 481 aa14.09□□□□□ -0.15
TRAPPC9-201ENST00000389328 RGL1Q9NZL6 768 aa14.09□□□□□ -0.15
TRAPPC9-201ENST00000389328 ZFP69BQ9UJL9 534 aa14.09□□□□□ -0.15
TRAPPC9-201ENST00000389328 MAP3K7O43318 606 aa14.09□□□□□ -0.15
TRAPPC9-201ENST00000389328 FSBPO95073 299 aa14.09□□□□□ -0.15
TRAPPC9-201ENST00000389328 MT-ND3P03897 115 aa14.09□□□□□ -0.15
TRAPPC9-201ENST00000389328 LMNB2Q03252 620 aa14.09□□□□□ -0.15
TRAPPC9-201ENST00000389328 KRT17Q04695 432 aa14.09□□□□□ -0.15
TRAPPC9-201ENST00000389328 FBXO25Q8TCJ0 367 aa14.09□□□□□ -0.15
TRAPPC9-201ENST00000389328 EPS8L3Q8TE67 593 aaKnown RBP14.09□□□□□ -0.15
TRAPPC9-201ENST00000389328 RIOK1Q9BRS2 568 aaKnown RBP14.09□□□□□ -0.15
TRAPPC9-201ENST00000389328 L3MBTL1Q9Y468 752 aa14.09□□□□□ -0.15
TRAPPC9-201ENST00000389328 KDM6AO15550 1401 aaPredicted RBP14.09□□□□□ -0.15
TRAPPC9-201ENST00000389328 JCADQ9P266 1359 aa14.09□□□□□ -0.15
TRAPPC9-201ENST00000389328 TESPA1A2RU30 521 aaPredicted RBP14.09□□□□□ -0.15
TRAPPC9-201ENST00000389328 MYBP10242 640 aa14.09□□□□□ -0.15
TRAPPC9-201ENST00000389328 PSMC4P43686 418 aa14.09□□□□□ -0.15
TRAPPC9-201ENST00000389328 ZNF844Q08AG5 666 aa14.09□□□□□ -0.15
TRAPPC9-201ENST00000389328 ORC2Q13416 577 aaPredicted RBP14.09□□□□□ -0.15
TRAPPC9-201ENST00000389328 KYNUQ16719 465 aa14.09□□□□□ -0.15
TRAPPC9-201ENST00000389328 ZNF34Q8IZ26 560 aa14.09□□□□□ -0.15
TRAPPC9-201ENST00000389328 MAML1Q92585 1016 aa14.09□□□□□ -0.15
TRAPPC9-201ENST00000389328 SYN2Q92777 582 aaPredicted RBP14.09□□□□□ -0.15
TRAPPC9-201ENST00000389328 ACCSQ96QU6 501 aa14.09□□□□□ -0.15
TRAPPC9-201ENST00000389328 BATF3Q9NR55 127 aa14.09□□□□□ -0.15
TRAPPC9-201ENST00000389328 RNASELQ05823 741 aaKnown RBP14.09□□□□□ -0.15
TRAPPC9-201ENST00000389328 MAP7Q14244 749 aa14.09□□□□□ -0.15
TRAPPC9-201ENST00000389328 PPP2R5DQ14738 602 aa14.09□□□□□ -0.15
TRAPPC9-201ENST00000389328 FUKQ8N0W3 1084 aa14.09□□□□□ -0.15
TRAPPC9-201ENST00000389328 SUPT20HQ8NEM7 779 aa14.09□□□□□ -0.15
TRAPPC9-201ENST00000389328 STOML1Q9UBI4 398 aa14.09□□□□□ -0.15
TRAPPC9-201ENST00000389328 MAD2L2Q9UI95 211 aa14.09□□□□□ -0.15
TRAPPC9-201ENST00000389328 ALG6Q9Y672 507 aa14.09□□□□□ -0.15
TRAPPC9-201ENST00000389328 KRT1P04264 644 aa14.08□□□□□ -0.15
TRAPPC9-201ENST00000389328 TRADDQ15628 312 aa14.08□□□□□ -0.15
TRAPPC9-201ENST00000389328 LONP2Q86WA8 852 aa14.08□□□□□ -0.15
TRAPPC9-201ENST00000389328 TTC17Q96AE7 1141 aa14.08□□□□□ -0.15
TRAPPC9-201ENST00000389328 RNF25Q96BH1 459 aaPredicted RBP14.08□□□□□ -0.15
TRAPPC9-201ENST00000389328 ERP27Q96DN0 273 aa14.08□□□□□ -0.15
TRAPPC9-201ENST00000389328 PABPC3Q9H361 631 aaKnown RBP14.08□□□□□ -0.15
TRAPPC9-201ENST00000389328 PCDHB4Q9Y5E5 795 aa14.08□□□□□ -0.15
TRAPPC9-201ENST00000389328 DIP2BQ9P265 1576 aa14.08□□□□□ -0.16
TRAPPC9-201ENST00000389328 KRT19P08727 400 aa14.08□□□□□ -0.16
TRAPPC9-201ENST00000389328 LIG4P49917 911 aa14.08□□□□□ -0.16
TRAPPC9-201ENST00000389328 IRF2BP1Q8IU81 584 aa14.08□□□□□ -0.16
TRAPPC9-201ENST00000389328 STAMBPL1Q96FJ0 436 aa14.08□□□□□ -0.16
TRAPPC9-201ENST00000389328 CCDC17Q96LX7 622 aa14.08□□□□□ -0.16
TRAPPC9-201ENST00000389328 REEP2Q9BRK0 252 aa14.08□□□□□ -0.16
TRAPPC9-201ENST00000389328 DONSONQ9NYP3 566 aa14.08□□□□□ -0.16
TRAPPC9-201ENST00000389328 SUCLA2Q9P2R7 463 aaPredicted RBP14.08□□□□□ -0.16
TRAPPC9-201ENST00000389328 SPATA31D1Q6ZQQ2 1576 aa14.08□□□□□ -0.16
TRAPPC9-201ENST00000389328 CFAP69A5D8W1 941 aa14.08□□□□□ -0.16
TRAPPC9-201ENST00000389328 PDXKO00764 312 aa14.08□□□□□ -0.16
TRAPPC9-201ENST00000389328 CLDN3O15551 220 aa14.08□□□□□ -0.16
TRAPPC9-201ENST00000389328 FGFR2P21802 821 aa14.08□□□□□ -0.16
TRAPPC9-201ENST00000389328 ZNF571Q7Z3V5 609 aaPredicted RBP14.08□□□□□ -0.16
TRAPPC9-201ENST00000389328 SYT2Q8N9I0 419 aaPredicted RBP14.08□□□□□ -0.16
TRAPPC9-201ENST00000389328 ALG13Q9NP73 1137 aaKnown RBP14.08□□□□□ -0.16
TRAPPC9-201ENST00000389328 OSGEPQ9NPF4 335 aa14.08□□□□□ -0.16
TRAPPC9-201ENST00000389328 MAD1L1Q9Y6D9 718 aa14.08□□□□□ -0.16
TRAPPC9-201ENST00000389328 FOXP2O15409 715 aa14.07□□□□□ -0.16
TRAPPC9-201ENST00000389328 PHF2O75151 1096 aa14.07□□□□□ -0.16
TRAPPC9-201ENST00000389328 PAX7P23759 505 aa14.07□□□□□ -0.16
TRAPPC9-201ENST00000389328 BASP1P80723 227 aaKnown RBP14.07□□□□□ -0.16
TRAPPC9-201ENST00000389328 ABCB5Q2M3G0 1257 aa14.07□□□□□ -0.16
TRAPPC9-201ENST00000389328 SBK1Q52WX2 424 aa14.07□□□□□ -0.16
TRAPPC9-201ENST00000389328 HIPK4Q8NE63 616 aa14.07□□□□□ -0.16
TRAPPC9-201ENST00000389328 VTI1AQ96AJ9 217 aa14.07□□□□□ -0.16
TRAPPC9-201ENST00000389328 GDF3Q9NR23 364 aa14.07□□□□□ -0.16
TRAPPC9-201ENST00000389328 ATMINO43313 823 aaPredicted RBP14.07□□□□□ -0.16
TRAPPC9-201ENST00000389328 ATP5HO75947 161 aa14.07□□□□□ -0.16
TRAPPC9-201ENST00000389328 MYCNP04198 464 aaPredicted RBP14.07□□□□□ -0.16
TRAPPC9-201ENST00000389328 AKR1B1P15121 316 aa14.07□□□□□ -0.16
TRAPPC9-201ENST00000389328 CCND1P24385 295 aa14.07□□□□□ -0.16
TRAPPC9-201ENST00000389328 CACNB3P54284 484 aa14.07□□□□□ -0.16
TRAPPC9-201ENST00000389328 CDR2Q01850 454 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms