RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 EXOC3O60645 756 aa16.26■□□□□ 0.19
SCFD2-201ENST00000388940 DNA2P51530 1060 aa16.26■□□□□ 0.19
SCFD2-201ENST00000388940 MCCD1P59942 119 aaPredicted RBP16.26■□□□□ 0.19
SCFD2-201ENST00000388940 MYL7Q01449 175 aa16.26■□□□□ 0.19
SCFD2-201ENST00000388940 TKFCQ3LXA3 575 aa16.26■□□□□ 0.19
SCFD2-201ENST00000388940 PEX26Q7Z412 305 aa16.26■□□□□ 0.19
SCFD2-201ENST00000388940 LMO3Q8TAP4 145 aa16.26■□□□□ 0.19
SCFD2-201ENST00000388940 TIPINQ9BVW5 301 aa16.26■□□□□ 0.19
SCFD2-201ENST00000388940 ST6GALNAC4Q9H4F1 302 aa16.26■□□□□ 0.19
SCFD2-201ENST00000388940 GINM1Q9NU53 330 aa16.26■□□□□ 0.19
SCFD2-201ENST00000388940 ZHX2Q9Y6X8 837 aa16.26■□□□□ 0.19
SCFD2-201ENST00000388940 GOLGA6CA6NDK9 693 aa16.25■□□□□ 0.19
SCFD2-201ENST00000388940 PHF20L1A8MW92 1017 aa16.25■□□□□ 0.19
SCFD2-201ENST00000388940 CCDC188H7C350 402 aa16.25■□□□□ 0.19
SCFD2-201ENST00000388940 PGRMC1O00264 195 aaKnown RBP16.25■□□□□ 0.19
SCFD2-201ENST00000388940 MAPK13O15264 365 aa16.25■□□□□ 0.19
SCFD2-201ENST00000388940 SHOX2O60902 331 aaPredicted RBP16.25■□□□□ 0.19
SCFD2-201ENST00000388940 GOLGA6DP0CG33 693 aa16.25■□□□□ 0.19
SCFD2-201ENST00000388940 RXRBP28702 533 aa16.25■□□□□ 0.19
SCFD2-201ENST00000388940 SNRPFP62306 86 aaKnown RBP16.25■□□□□ 0.19
SCFD2-201ENST00000388940 KIF22Q14807 665 aa16.25■□□□□ 0.19
SCFD2-201ENST00000388940 INTS8Q75QN2 995 aaKnown RBP16.25■□□□□ 0.19
SCFD2-201ENST00000388940 NT5DC3Q86UY8 548 aa16.25■□□□□ 0.19
SCFD2-201ENST00000388940 IQCKQ8N0W5 287 aa16.25■□□□□ 0.19
SCFD2-201ENST00000388940 METTL13Q8N6R0 699 aa16.25■□□□□ 0.19
SCFD2-201ENST00000388940 CASKIN2Q8WXE0 1202 aa16.25■□□□□ 0.19
SCFD2-201ENST00000388940 HOOK2Q96ED9 719 aa16.25■□□□□ 0.19
SCFD2-201ENST00000388940 HES6Q96HZ4 224 aa16.25■□□□□ 0.19
SCFD2-201ENST00000388940 ACCSQ96QU6 501 aa16.25■□□□□ 0.19
SCFD2-201ENST00000388940 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.25■□□□□ 0.19
SCFD2-201ENST00000388940 ZNF341Q9BYN7 854 aa16.25■□□□□ 0.19
SCFD2-201ENST00000388940 GOLGA6AQ9NYA3 693 aa16.25■□□□□ 0.19
SCFD2-201ENST00000388940 NFU1Q9UMS0 254 aa16.25■□□□□ 0.19
SCFD2-201ENST00000388940 K7ENM7 598 aa16.25■□□□□ 0.19
SCFD2-201ENST00000388940 NFIBO00712 420 aa16.25■□□□□ 0.19
SCFD2-201ENST00000388940 RAD51CO43502 376 aa16.25■□□□□ 0.19
SCFD2-201ENST00000388940 TRIM49P0CI25 452 aa16.25■□□□□ 0.19
SCFD2-201ENST00000388940 TRIM49CP0CI26 452 aa16.25■□□□□ 0.19
SCFD2-201ENST00000388940 KRT13P13646 458 aa16.25■□□□□ 0.19
SCFD2-201ENST00000388940 KCNA3P22001 575 aa16.25■□□□□ 0.19
SCFD2-201ENST00000388940 QARSP47897 775 aaKnown RBP16.25■□□□□ 0.19
SCFD2-201ENST00000388940 RARRES1P49788 294 aa16.25■□□□□ 0.19
SCFD2-201ENST00000388940 IRX3P78415 501 aaPredicted RBP16.25■□□□□ 0.19
SCFD2-201ENST00000388940 NIM1KQ8IY84 436 aa16.25■□□□□ 0.19
SCFD2-201ENST00000388940 RFFLQ8WZ73 363 aa16.25■□□□□ 0.19
SCFD2-201ENST00000388940 TBC1D22BQ9NU19 505 aa16.25■□□□□ 0.19
SCFD2-201ENST00000388940 FER1L6Q2WGJ9 1857 aa16.24■□□□□ 0.19
SCFD2-201ENST00000388940 DDX39AO00148 427 aaKnown RBP16.24■□□□□ 0.19
SCFD2-201ENST00000388940 WNT10BO00744 389 aa16.24■□□□□ 0.19
SCFD2-201ENST00000388940 CEP104O60308 925 aa16.24■□□□□ 0.19
SCFD2-201ENST00000388940 PLS3P13797 630 aa16.24■□□□□ 0.19
SCFD2-201ENST00000388940 ITGB3BPQ13352 177 aaPredicted RBP16.24■□□□□ 0.19
SCFD2-201ENST00000388940 SAMD1Q6SPF0 538 aaPredicted RBP16.24■□□□□ 0.19
SCFD2-201ENST00000388940 LRRC31Q6UY01 552 aa16.24■□□□□ 0.19
SCFD2-201ENST00000388940 DNAAF5Q86Y56 855 aa16.24■□□□□ 0.19
SCFD2-201ENST00000388940 CD302Q8IX05 232 aa16.24■□□□□ 0.19
SCFD2-201ENST00000388940 IL31RAQ8NI17 732 aa16.24■□□□□ 0.19
SCFD2-201ENST00000388940 KIAA1683Q9H0B3 1180 aa16.24■□□□□ 0.19
SCFD2-201ENST00000388940 TSPYL1Q9H0U9 437 aa16.24■□□□□ 0.19
SCFD2-201ENST00000388940 ISCUQ9H1K1 167 aa16.24■□□□□ 0.19
SCFD2-201ENST00000388940 PNMA2Q9UL42 364 aa16.24■□□□□ 0.19
SCFD2-201ENST00000388940 TTC7AQ9ULT0 858 aaPredicted RBP16.24■□□□□ 0.19
SCFD2-201ENST00000388940 DIS3Q9Y2L1 958 aaKnown RBP16.24■□□□□ 0.19
SCFD2-201ENST00000388940 PMM2O15305 246 aa16.23■□□□□ 0.19
SCFD2-201ENST00000388940 RNASE9P60153 205 aaKnown RBP16.23■□□□□ 0.19
SCFD2-201ENST00000388940 MRPS9P82933 396 aaKnown RBP16.23■□□□□ 0.19
SCFD2-201ENST00000388940 PPATQ06203 517 aa16.23■□□□□ 0.19
SCFD2-201ENST00000388940 GLYCTKQ8IVS8 523 aa16.23■□□□□ 0.19
SCFD2-201ENST00000388940 SYTL5Q8TDW5 730 aaPredicted RBP16.23■□□□□ 0.19
SCFD2-201ENST00000388940 RUFY1Q96T51 708 aa16.23■□□□□ 0.19
SCFD2-201ENST00000388940 GOLPH3Q9H4A6 298 aa16.23■□□□□ 0.19
SCFD2-201ENST00000388940 SLC38A10Q9HBR0 1119 aa16.23■□□□□ 0.19
SCFD2-201ENST00000388940 USP20Q9Y2K6 914 aa16.23■□□□□ 0.19
SCFD2-201ENST00000388940 ZSCAN5CA6NGD5 496 aaPredicted RBP16.23■□□□□ 0.19
SCFD2-201ENST00000388940 FAM153BP0C7A2 387 aa16.23■□□□□ 0.19
SCFD2-201ENST00000388940 TNFAIP3P21580 790 aa16.23■□□□□ 0.19
SCFD2-201ENST00000388940 GTF2BQ00403 316 aa16.23■□□□□ 0.19
SCFD2-201ENST00000388940 CUL1Q13616 776 aa16.23■□□□□ 0.19
SCFD2-201ENST00000388940 FAM153CQ494X1 144 aa16.23■□□□□ 0.19
SCFD2-201ENST00000388940 PHLDB3Q6NSJ2 640 aa16.23■□□□□ 0.19
SCFD2-201ENST00000388940 DAAM2Q86T65 1068 aa16.23■□□□□ 0.19
SCFD2-201ENST00000388940 IFT81Q8WYA0 676 aa16.23■□□□□ 0.19
SCFD2-201ENST00000388940 TAF1DQ9H5J8 278 aaPredicted RBP16.23■□□□□ 0.19
SCFD2-201ENST00000388940 FAM153AQ9UHL3 310 aa16.23■□□□□ 0.19
SCFD2-201ENST00000388940 AMFRQ9UKV5 643 aa16.23■□□□□ 0.19
SCFD2-201ENST00000388940 TMCO5BA8MYB1 307 aa16.22■□□□□ 0.19
SCFD2-201ENST00000388940 TULP2O00295 520 aa16.22■□□□□ 0.19
SCFD2-201ENST00000388940 VAMP7P51809 220 aa16.22■□□□□ 0.19
SCFD2-201ENST00000388940 CXCL9Q07325 125 aa16.22■□□□□ 0.19
SCFD2-201ENST00000388940 CETN1Q12798 172 aa16.22■□□□□ 0.19
SCFD2-201ENST00000388940 MTMR1Q13613 665 aa16.22■□□□□ 0.19
SCFD2-201ENST00000388940 NBPF9Q3BBW0 867 aa16.22■□□□□ 0.19
SCFD2-201ENST00000388940 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.22■□□□□ 0.19
SCFD2-201ENST00000388940 KLHL7Q8IXQ5 586 aa16.22■□□□□ 0.19
SCFD2-201ENST00000388940 C4orf19Q8IY42 314 aa16.22■□□□□ 0.19
SCFD2-201ENST00000388940 C1orf131Q8NDD1 294 aaKnown RBP16.22■□□□□ 0.19
SCFD2-201ENST00000388940 SLC17A8Q8NDX2 589 aa16.22■□□□□ 0.19
SCFD2-201ENST00000388940 SLC35G2Q8TBE7 412 aa16.22■□□□□ 0.19
SCFD2-201ENST00000388940 CTNNBL1Q8WYA6 563 aaPredicted RBP16.22■□□□□ 0.19
SCFD2-201ENST00000388940 ZIM3Q96PE6 472 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms