RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 EDAQ92838 391 aa3.32□□□□□ -1.88
RNU6-541P-201ENST00000384709 SLC5A5Q92911 643 aa3.32□□□□□ -1.88
RNU6-541P-201ENST00000384709 GPR101Q96P66 508 aaPredicted RBP3.32□□□□□ -1.88
RNU6-541P-201ENST00000384709 TTC1Q99614 292 aa3.32□□□□□ -1.88
RNU6-541P-201ENST00000384709 ENKD1Q9H0I2 346 aa3.32□□□□□ -1.88
RNU6-541P-201ENST00000384709 CDC42EP3Q9UKI2 254 aa3.32□□□□□ -1.88
RNU6-541P-201ENST00000384709 ZNF536O15090 1300 aa3.32□□□□□ -1.88
RNU6-541P-201ENST00000384709 PHLDB1Q86UU1 1377 aa3.32□□□□□ -1.88
RNU6-541P-201ENST00000384709 SLC26A4O43511 780 aa3.31□□□□□ -1.88
RNU6-541P-201ENST00000384709 ZNF623O75123 536 aa3.31□□□□□ -1.88
RNU6-541P-201ENST00000384709 ZNF20P17024 532 aa3.31□□□□□ -1.88
RNU6-541P-201ENST00000384709 ID4P47928 161 aa3.31□□□□□ -1.88
RNU6-541P-201ENST00000384709 RRADP55042 308 aa3.31□□□□□ -1.88
RNU6-541P-201ENST00000384709 SESN3P58005 492 aa3.31□□□□□ -1.88
RNU6-541P-201ENST00000384709 IL2P60568 153 aa3.31□□□□□ -1.88
RNU6-541P-201ENST00000384709 FAPQ12884 760 aa3.31□□□□□ -1.88
RNU6-541P-201ENST00000384709 ADAM15Q13444 863 aa3.31□□□□□ -1.88
RNU6-541P-201ENST00000384709 MAN2A1Q16706 1144 aa3.31□□□□□ -1.88
RNU6-541P-201ENST00000384709 ZNF568Q3ZCX4 644 aa3.31□□□□□ -1.88
RNU6-541P-201ENST00000384709 ATP13A4Q4VNC1 1196 aa3.31□□□□□ -1.88
RNU6-541P-201ENST00000384709 BROXQ5VW32 411 aa3.31□□□□□ -1.88
RNU6-541P-201ENST00000384709 PRAMEF9Q5VWM5 478 aa3.31□□□□□ -1.88
RNU6-541P-201ENST00000384709 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.31□□□□□ -1.88
RNU6-541P-201ENST00000384709 PRRT2Q7Z6L0 340 aaPredicted RBP3.31□□□□□ -1.88
RNU6-541P-201ENST00000384709 ADGRE4PQ86SQ3 457 aa3.31□□□□□ -1.88
RNU6-541P-201ENST00000384709 C11orf74Q86VG3 221 aa3.31□□□□□ -1.88
RNU6-541P-201ENST00000384709 TAX1BP1Q86VP1 789 aa3.31□□□□□ -1.88
RNU6-541P-201ENST00000384709 GPR135Q8IZ08 494 aa3.31□□□□□ -1.88
RNU6-541P-201ENST00000384709 RTKN2Q8IZC4 609 aa3.31□□□□□ -1.88
RNU6-541P-201ENST00000384709 UNC5BQ8IZJ1 945 aa3.31□□□□□ -1.88
RNU6-541P-201ENST00000384709 CDYL2Q8N8U2 506 aa3.31□□□□□ -1.88
RNU6-541P-201ENST00000384709 PLA2G15Q8NCC3 412 aa3.31□□□□□ -1.88
RNU6-541P-201ENST00000384709 DVL3Q92997 716 aaPredicted RBP3.31□□□□□ -1.88
RNU6-541P-201ENST00000384709 USP7Q93009 1102 aa3.31□□□□□ -1.88
RNU6-541P-201ENST00000384709 DYDC2Q96IM9 177 aa3.31□□□□□ -1.88
RNU6-541P-201ENST00000384709 HIST1H2AHQ96KK5 128 aa3.31□□□□□ -1.88
RNU6-541P-201ENST00000384709 WDR92Q96MX6 357 aa3.31□□□□□ -1.88
RNU6-541P-201ENST00000384709 HIST1H2AJQ99878 128 aa3.31□□□□□ -1.88
RNU6-541P-201ENST00000384709 POFUT1Q9H488 388 aa3.31□□□□□ -1.88
RNU6-541P-201ENST00000384709 MTG2Q9H4K7 406 aa3.31□□□□□ -1.88
RNU6-541P-201ENST00000384709 AGO3Q9H9G7 860 aaKnown RBP3.31□□□□□ -1.88
RNU6-541P-201ENST00000384709 PUF60Q9UHX1 559 aaKnown RBP3.31□□□□□ -1.88
RNU6-541P-201ENST00000384709 MSRAQ9UJ68 235 aa3.31□□□□□ -1.88
RNU6-541P-201ENST00000384709 ZFR2Q9UPR6 939 aaKnown RBP3.31□□□□□ -1.88
RNU6-541P-201ENST00000384709 MYRFQ9Y2G1 1151 aa3.31□□□□□ -1.88
RNU6-541P-201ENST00000384709 TSC22D4Q9Y3Q8 395 aa3.31□□□□□ -1.88
RNU6-541P-201ENST00000384709 NR2E1Q9Y466 385 aa3.31□□□□□ -1.88
RNU6-541P-201ENST00000384709 PPP2R3BQ9Y5P8 575 aa3.31□□□□□ -1.88
RNU6-541P-201ENST00000384709 SBNO2Q9Y2G9 1366 aa3.3□□□□□ -1.88
RNU6-541P-201ENST00000384709 PRSS38A1L453 326 aa3.3□□□□□ -1.88
RNU6-541P-201ENST00000384709 FSBPO95073 299 aa3.3□□□□□ -1.88
RNU6-541P-201ENST00000384709 VSIG10L2P0DP72 767 aa3.3□□□□□ -1.88
RNU6-541P-201ENST00000384709 SELENOPP49908 381 aa3.3□□□□□ -1.88
RNU6-541P-201ENST00000384709 PDCD1Q15116 288 aa3.3□□□□□ -1.88
RNU6-541P-201ENST00000384709 DDB1Q16531 1140 aa3.3□□□□□ -1.88
RNU6-541P-201ENST00000384709 POLNQ7Z5Q5 900 aa3.3□□□□□ -1.88
RNU6-541P-201ENST00000384709 FUKQ8N0W3 1084 aa3.3□□□□□ -1.88
RNU6-541P-201ENST00000384709 CLRN3Q8NCR9 226 aa3.3□□□□□ -1.88
RNU6-541P-201ENST00000384709 LOXL4Q96JB6 756 aa3.3□□□□□ -1.88
RNU6-541P-201ENST00000384709 C8orf49Q96NF6 230 aa3.3□□□□□ -1.88
RNU6-541P-201ENST00000384709 GNRHR2Q96P88 292 aa3.3□□□□□ -1.88
RNU6-541P-201ENST00000384709 GPHA2Q96T91 129 aa3.3□□□□□ -1.88
RNU6-541P-201ENST00000384709 MPHOSPH9Q99550 1183 aa3.3□□□□□ -1.88
RNU6-541P-201ENST00000384709 FDXACB1Q9BRP7 624 aaPredicted RBP3.3□□□□□ -1.88
RNU6-541P-201ENST00000384709 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.3□□□□□ -1.88
RNU6-541P-201ENST00000384709 PRSS50Q9UI38 385 aa3.3□□□□□ -1.88
RNU6-541P-201ENST00000384709 PCDHB6Q9Y5E3 794 aa3.3□□□□□ -1.88
RNU6-541P-201ENST00000384709 KAT6AQ92794 2004 aa3.3□□□□□ -1.88
RNU6-541P-201ENST00000384709 A0A1W2PR48 441 aa3.29□□□□□ -1.88
RNU6-541P-201ENST00000384709 GPR39O43194 453 aa3.29□□□□□ -1.88
RNU6-541P-201ENST00000384709 JUNP05412 331 aaKnown RBP3.29□□□□□ -1.88
RNU6-541P-201ENST00000384709 GAAP10253 952 aa3.29□□□□□ -1.88
RNU6-541P-201ENST00000384709 KIR2DL3P43628 341 aa3.29□□□□□ -1.88
RNU6-541P-201ENST00000384709 FOXL1Q12952 345 aa3.29□□□□□ -1.88
RNU6-541P-201ENST00000384709 RIN1Q13671 783 aa3.29□□□□□ -1.88
RNU6-541P-201ENST00000384709 SAFB2Q14151 953 aaKnown RBP eCLIP3.29□□□□□ -1.88
RNU6-541P-201ENST00000384709 STAT4Q14765 748 aa3.29□□□□□ -1.88
RNU6-541P-201ENST00000384709 FSCN1Q16658 493 aaKnown RBP3.29□□□□□ -1.88
RNU6-541P-201ENST00000384709 RNF219Q5W0B1 726 aaPredicted RBP3.29□□□□□ -1.88
RNU6-541P-201ENST00000384709 HTR3DQ70Z44 454 aa3.29□□□□□ -1.88
RNU6-541P-201ENST00000384709 TAS1R1Q7RTX1 841 aa3.29□□□□□ -1.88
RNU6-541P-201ENST00000384709 PIK3C3Q8NEB9 887 aa3.29□□□□□ -1.88
RNU6-541P-201ENST00000384709 SHCBP1Q8NEM2 672 aa3.29□□□□□ -1.88
RNU6-541P-201ENST00000384709 LMBR1Q8WVP7 490 aa3.29□□□□□ -1.88
RNU6-541P-201ENST00000384709 BORCS6Q96GS4 357 aa3.29□□□□□ -1.88
RNU6-541P-201ENST00000384709 ACAP3Q96P50 834 aa3.29□□□□□ -1.88
RNU6-541P-201ENST00000384709 LRRC37BQ96QE4 947 aa3.29□□□□□ -1.88
RNU6-541P-201ENST00000384709 CDK5RAP1Q96SZ6 601 aaKnown RBP3.29□□□□□ -1.88
RNU6-541P-201ENST00000384709 DPYSL5Q9BPU6 564 aa3.29□□□□□ -1.88
RNU6-541P-201ENST00000384709 NOL10Q9BSC4 688 aaKnown RBP3.29□□□□□ -1.88
RNU6-541P-201ENST00000384709 PLA2G12BQ9BX93 195 aa3.29□□□□□ -1.88
RNU6-541P-201ENST00000384709 KLC2Q9H0B6 622 aa3.29□□□□□ -1.88
RNU6-541P-201ENST00000384709 MS4A5Q9H3V2 200 aa3.29□□□□□ -1.88
RNU6-541P-201ENST00000384709 C14orf93Q9H972 538 aaKnown RBP3.29□□□□□ -1.88
RNU6-541P-201ENST00000384709 PLA2G3Q9NZ20 509 aa3.29□□□□□ -1.88
RNU6-541P-201ENST00000384709 SYNPO2Q9UMS6 1093 aa3.29□□□□□ -1.88
RNU6-541P-201ENST00000384709 LCHNA4D1U4 455 aa3.28□□□□□ -1.88
RNU6-541P-201ENST00000384709 DAPK3O43293 454 aa3.28□□□□□ -1.88
RNU6-541P-201ENST00000384709 KDM1AO60341 852 aa3.28□□□□□ -1.88
RNU6-541P-201ENST00000384709 NRP2O60462 931 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms