RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 LATS1O95835 1130 aa0.45□□□□□ -2.34
RNU6-540P-201ENST00000384622 FAHP16930 419 aa0.45□□□□□ -2.34
RNU6-540P-201ENST00000384622 CBLP22681 906 aa0.45□□□□□ -2.34
RNU6-540P-201ENST00000384622 APOBEC3AP31941 199 aaPredicted RBP0.45□□□□□ -2.34
RNU6-540P-201ENST00000384622 ADCY7P51828 1080 aa0.45□□□□□ -2.34
RNU6-540P-201ENST00000384622 RPL11P62913 178 aaKnown RBP0.45□□□□□ -2.34
RNU6-540P-201ENST00000384622 ZXDBP98169 803 aa0.45□□□□□ -2.34
RNU6-540P-201ENST00000384622 CCDC85BQ15834 202 aaPredicted RBP0.45□□□□□ -2.34
RNU6-540P-201ENST00000384622 PAN2Q504Q3 1202 aaKnown RBP0.45□□□□□ -2.34
RNU6-540P-201ENST00000384622 LVRNQ6Q4G3 990 aa0.45□□□□□ -2.34
RNU6-540P-201ENST00000384622 AMIGO2Q86SJ2 522 aa0.45□□□□□ -2.34
RNU6-540P-201ENST00000384622 PLXDC1Q8IUK5 500 aa0.45□□□□□ -2.34
RNU6-540P-201ENST00000384622 ARL8AQ96BM9 186 aa0.45□□□□□ -2.34
RNU6-540P-201ENST00000384622 DCTN5Q9BTE1 182 aa0.45□□□□□ -2.34
RNU6-540P-201ENST00000384622 HAPLN2Q9GZV7 340 aa0.45□□□□□ -2.34
RNU6-540P-201ENST00000384622 CLEC1BQ9P126 229 aa0.45□□□□□ -2.34
RNU6-540P-201ENST00000384622 TIMELESSQ9UNS1 1208 aa0.45□□□□□ -2.34
RNU6-540P-201ENST00000384622 ENTPD2Q9Y5L3 495 aa0.45□□□□□ -2.34
RNU6-540P-201ENST00000384622 SNED1Q8TER0 1413 aa0.45□□□□□ -2.34
RNU6-540P-201ENST00000384622 AHNAKQ09666 5890 aaKnown RBP0.44□□□□□ -2.34
RNU6-540P-201ENST00000384622 C9IYK1 514 aa0.44□□□□□ -2.34
RNU6-540P-201ENST00000384622 ABL1P00519 1130 aa0.44□□□□□ -2.34
RNU6-540P-201ENST00000384622 ITGA4P13612 1032 aa0.44□□□□□ -2.34
RNU6-540P-201ENST00000384622 CD247P20963 164 aa0.44□□□□□ -2.34
RNU6-540P-201ENST00000384622 SFPQP23246 707 aaKnown RBP eCLIP0.44□□□□□ -2.34
RNU6-540P-201ENST00000384622 LTBRP36941 435 aa0.44□□□□□ -2.34
RNU6-540P-201ENST00000384622 CSRP3P50461 194 aa0.44□□□□□ -2.34
RNU6-540P-201ENST00000384622 TFF2Q03403 129 aa0.44□□□□□ -2.34
RNU6-540P-201ENST00000384622 TRIP6Q15654 476 aaKnown RBP0.44□□□□□ -2.34
RNU6-540P-201ENST00000384622 ANKRD39Q53RE8 183 aa0.44□□□□□ -2.34
RNU6-540P-201ENST00000384622 TSTD2Q5T7W7 516 aa0.44□□□□□ -2.34
RNU6-540P-201ENST00000384622 DCAF15Q66K64 600 aa0.44□□□□□ -2.34
RNU6-540P-201ENST00000384622 CXXC5Q7LFL8 322 aaKnown RBP0.44□□□□□ -2.34
RNU6-540P-201ENST00000384622 CLEC4DQ8WXI8 215 aa0.44□□□□□ -2.34
RNU6-540P-201ENST00000384622 NKD2Q969F2 451 aaPredicted RBP0.44□□□□□ -2.34
RNU6-540P-201ENST00000384622 CITED4Q96RK1 184 aa0.44□□□□□ -2.34
RNU6-540P-201ENST00000384622 GPHA2Q96T91 129 aa0.44□□□□□ -2.34
RNU6-540P-201ENST00000384622 MMP19Q99542 508 aa0.44□□□□□ -2.34
RNU6-540P-201ENST00000384622 ADAM2Q99965 735 aa0.44□□□□□ -2.34
RNU6-540P-201ENST00000384622 OSBPL7Q9BZF2 842 aa0.44□□□□□ -2.34
RNU6-540P-201ENST00000384622 SLC6A15Q9H2J7 730 aa0.44□□□□□ -2.34
RNU6-540P-201ENST00000384622 CNNM2Q9H8M5 875 aa0.44□□□□□ -2.34
RNU6-540P-201ENST00000384622 SLC39A2Q9NP94 309 aa0.44□□□□□ -2.34
RNU6-540P-201ENST00000384622 IL23AQ9NPF7 189 aa0.44□□□□□ -2.34
RNU6-540P-201ENST00000384622 RCAN3Q9UKA8 241 aa0.44□□□□□ -2.34
RNU6-540P-201ENST00000384622 TIMM13Q9Y5L4 95 aaPredicted RBP0.44□□□□□ -2.34
RNU6-540P-201ENST00000384622 A0A0G2JNJ9 132 aa0.43□□□□□ -2.34
RNU6-540P-201ENST00000384622 FAM221AA4D161 298 aa0.43□□□□□ -2.34
RNU6-540P-201ENST00000384622 DGKIO75912 1065 aa0.43□□□□□ -2.34
RNU6-540P-201ENST00000384622 FOSP01100 380 aaPredicted RBP0.43□□□□□ -2.34
RNU6-540P-201ENST00000384622 CRYABP02511 175 aaKnown RBP0.43□□□□□ -2.34
RNU6-540P-201ENST00000384622 UMODP07911 640 aa0.43□□□□□ -2.34
RNU6-540P-201ENST00000384622 TMEM191BP0C7N4 346 aa0.43□□□□□ -2.34
RNU6-540P-201ENST00000384622 CYP2D6P10635 497 aa0.43□□□□□ -2.34
RNU6-540P-201ENST00000384622 PLS3P13797 630 aa0.43□□□□□ -2.34
RNU6-540P-201ENST00000384622 GM2AP17900 193 aa0.43□□□□□ -2.34
RNU6-540P-201ENST00000384622 STAT5BP51692 787 aa0.43□□□□□ -2.34
RNU6-540P-201ENST00000384622 HAP1P54257 671 aaPredicted RBP0.43□□□□□ -2.34
RNU6-540P-201ENST00000384622 SOX10P56693 466 aa0.43□□□□□ -2.34
RNU6-540P-201ENST00000384622 ST5P78524 1137 aa0.43□□□□□ -2.34
RNU6-540P-201ENST00000384622 RPL36AP83881 106 aaKnown RBP0.43□□□□□ -2.34
RNU6-540P-201ENST00000384622 MXRA7P84157 204 aa0.43□□□□□ -2.34
RNU6-540P-201ENST00000384622 RESTQ13127 1097 aa0.43□□□□□ -2.34
RNU6-540P-201ENST00000384622 INF2Q27J81 1249 aa0.43□□□□□ -2.34
RNU6-540P-201ENST00000384622 ZNF772Q68DY9 489 aaPredicted RBP0.43□□□□□ -2.34
RNU6-540P-201ENST00000384622 OVOS1Q6IE37 1185 aa0.43□□□□□ -2.34
RNU6-540P-201ENST00000384622 Q7L0L9 218 aa0.43□□□□□ -2.34
RNU6-540P-201ENST00000384622 NLRC3Q7RTR2 1065 aa0.43□□□□□ -2.34
RNU6-540P-201ENST00000384622 CCDC84Q86UT8 332 aaPredicted RBP0.43□□□□□ -2.34
RNU6-540P-201ENST00000384622 Q8N1Y9 231 aa0.43□□□□□ -2.34
RNU6-540P-201ENST00000384622 ANKRD53Q8N9V6 530 aa0.43□□□□□ -2.34
RNU6-540P-201ENST00000384622 PPIL4Q8WUA2 492 aaKnown RBP eCLIP0.43□□□□□ -2.34
RNU6-540P-201ENST00000384622 NDC1Q9BTX1 674 aa0.43□□□□□ -2.34
RNU6-540P-201ENST00000384622 PRSS22Q9GZN4 317 aa0.43□□□□□ -2.34
RNU6-540P-201ENST00000384622 TRNAU1APQ9NX07 287 aaKnown RBP0.43□□□□□ -2.34
RNU6-540P-201ENST00000384622 SUCOQ9UBS9 1254 aaKnown RBP0.43□□□□□ -2.34
RNU6-540P-201ENST00000384622 Q9UFV3 132 aa0.43□□□□□ -2.34
RNU6-540P-201ENST00000384622 EGFL7Q9UHF1 273 aa0.43□□□□□ -2.34
RNU6-540P-201ENST00000384622 TLR6Q9Y2C9 796 aa0.43□□□□□ -2.34
RNU6-540P-201ENST00000384622 A0A087WZG4 1122 aa0.42□□□□□ -2.34
RNU6-540P-201ENST00000384622 KRIT1O00522 736 aa0.42□□□□□ -2.34
RNU6-540P-201ENST00000384622 SLC27A2O14975 620 aa0.42□□□□□ -2.34
RNU6-540P-201ENST00000384622 USP17L7P0C7H9 530 aa0.42□□□□□ -2.34
RNU6-540P-201ENST00000384622 KRT5P13647 590 aa0.42□□□□□ -2.34
RNU6-540P-201ENST00000384622 BCL6P41182 706 aa0.42□□□□□ -2.34
RNU6-540P-201ENST00000384622 GTF2A2P52657 109 aa0.42□□□□□ -2.34
RNU6-540P-201ENST00000384622 IL13RA1P78552 427 aa0.42□□□□□ -2.34
RNU6-540P-201ENST00000384622 CEP78Q5JTW2 689 aa0.42□□□□□ -2.34
RNU6-540P-201ENST00000384622 ZNF66Q6ZN08 573 aa0.42□□□□□ -2.34
RNU6-540P-201ENST00000384622 APBB1IPQ7Z5R6 666 aaPredicted RBP0.42□□□□□ -2.34
RNU6-540P-201ENST00000384622 GPR149Q86SP6 731 aa0.42□□□□□ -2.34
RNU6-540P-201ENST00000384622 PRSS3P2Q8NHM4 247 aa0.42□□□□□ -2.34
RNU6-540P-201ENST00000384622 GATAD2BQ8WXI9 593 aa0.42□□□□□ -2.34
RNU6-540P-201ENST00000384622 LPPQ93052 612 aa0.42□□□□□ -2.34
RNU6-540P-201ENST00000384622 ALKBH8Q96BT7 664 aaKnown RBP0.42□□□□□ -2.34
RNU6-540P-201ENST00000384622 ATG4CQ96DT6 458 aa0.42□□□□□ -2.34
RNU6-540P-201ENST00000384622 DHRS1Q96LJ7 313 aa0.42□□□□□ -2.34
RNU6-540P-201ENST00000384622 MEIS3Q99687 375 aa0.42□□□□□ -2.34
RNU6-540P-201ENST00000384622 SMURF1Q9HCE7 757 aa0.42□□□□□ -2.34
RNU6-540P-201ENST00000384622 CASS4Q9NQ75 786 aa0.42□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms