RNA–Protein interactions for RNA: ENST00000381897.5

RFC1-202, Transcript of replication factor C subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFC1, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-202ENST00000381897 USP31Q70CQ4 1352 aa6.12□□□□□ -1.43
RFC1-202ENST00000381897 SMIM23A6NLE4 172 aa6.12□□□□□ -1.43
RFC1-202ENST00000381897 E7ENQ6 273 aa6.12□□□□□ -1.43
RFC1-202ENST00000381897 SCGB1D2O95969 90 aa6.12□□□□□ -1.43
RFC1-202ENST00000381897 SPARCP09486 303 aa6.12□□□□□ -1.43
RFC1-202ENST00000381897 PDHBP11177 359 aa6.12□□□□□ -1.43
RFC1-202ENST00000381897 PECAM1P16284 738 aaPredicted RBP6.12□□□□□ -1.43
RFC1-202ENST00000381897 STMN1P16949 149 aa6.12□□□□□ -1.43
RFC1-202ENST00000381897 KLHL30Q0D2K2 578 aa6.12□□□□□ -1.43
RFC1-202ENST00000381897 RCN2Q14257 317 aa6.12□□□□□ -1.43
RFC1-202ENST00000381897 SEL1L2Q5TEA6 688 aa6.12□□□□□ -1.43
RFC1-202ENST00000381897 SV2BQ7L1I2 683 aa6.12□□□□□ -1.43
RFC1-202ENST00000381897 PLBD2Q8NHP8 589 aa6.12□□□□□ -1.43
RFC1-202ENST00000381897 FERMT1Q9BQL6 677 aa6.12□□□□□ -1.43
RFC1-202ENST00000381897 CENPKQ9BS16 269 aa6.12□□□□□ -1.43
RFC1-202ENST00000381897 KATNAL1Q9BW62 490 aa6.12□□□□□ -1.43
RFC1-202ENST00000381897 SPZ1Q9BXG8 430 aa6.12□□□□□ -1.43
RFC1-202ENST00000381897 SLITRK6Q9H5Y7 841 aa6.12□□□□□ -1.43
RFC1-202ENST00000381897 ECT2Q9H8V3 914 aa6.12□□□□□ -1.43
RFC1-202ENST00000381897 LGR6Q9HBX8 967 aa6.12□□□□□ -1.43
RFC1-202ENST00000381897 SPON1Q9HCB6 807 aa6.12□□□□□ -1.43
RFC1-202ENST00000381897 CORO1CQ9ULV4 474 aaPredicted RBP6.12□□□□□ -1.43
RFC1-202ENST00000381897 ROBO2Q9HCK4 1378 aa6.12□□□□□ -1.43
RFC1-202ENST00000381897 UTYO14607 1347 aa6.12□□□□□ -1.43
RFC1-202ENST00000381897 SPATA31A6Q5VVP1 1343 aa6.12□□□□□ -1.43
RFC1-202ENST00000381897 ENO4A6NNW6 628 aa6.12□□□□□ -1.43
RFC1-202ENST00000381897 LAD1O00515 517 aa6.12□□□□□ -1.43
RFC1-202ENST00000381897 ABLIM1O14639 778 aa6.12□□□□□ -1.43
RFC1-202ENST00000381897 BUB1O43683 1085 aa6.12□□□□□ -1.43
RFC1-202ENST00000381897 PF4V1P10720 104 aa6.12□□□□□ -1.43
RFC1-202ENST00000381897 HSPA6P17066 643 aa6.12□□□□□ -1.43
RFC1-202ENST00000381897 CCNE1P24864 410 aa6.12□□□□□ -1.43
RFC1-202ENST00000381897 STX2P32856 288 aa6.12□□□□□ -1.43
RFC1-202ENST00000381897 EIF4A3P38919 411 aaKnown RBP6.12□□□□□ -1.43
RFC1-202ENST00000381897 PAPOLAP51003 745 aaKnown RBP6.12□□□□□ -1.43
RFC1-202ENST00000381897 MTTPP55157 894 aa6.12□□□□□ -1.43
RFC1-202ENST00000381897 MAGOHP61326 146 aaKnown RBP6.12□□□□□ -1.43
RFC1-202ENST00000381897 MAP3K10Q02779 954 aa6.12□□□□□ -1.43
RFC1-202ENST00000381897 RASSF7Q02833 373 aa6.12□□□□□ -1.43
RFC1-202ENST00000381897 DHX9Q08211 1270 aaKnown RBP6.12□□□□□ -1.43
RFC1-202ENST00000381897 BYSLQ13895 437 aaKnown RBP6.12□□□□□ -1.43
RFC1-202ENST00000381897 MAN2A1Q16706 1144 aa6.12□□□□□ -1.43
RFC1-202ENST00000381897 KCTD21Q4G0X4 260 aa6.12□□□□□ -1.43
RFC1-202ENST00000381897 ANKS6Q68DC2 871 aa6.12□□□□□ -1.43
RFC1-202ENST00000381897 IP6K1Q92551 441 aa6.12□□□□□ -1.43
RFC1-202ENST00000381897 TBC1D5Q92609 795 aa6.12□□□□□ -1.43
RFC1-202ENST00000381897 MAGOHBQ96A72 148 aaKnown RBP6.12□□□□□ -1.43
RFC1-202ENST00000381897 ARL8AQ96BM9 186 aa6.12□□□□□ -1.43
RFC1-202ENST00000381897 XPO6Q96QU8 1125 aaKnown RBP6.12□□□□□ -1.43
RFC1-202ENST00000381897 MMADHCQ9H3L0 296 aaPredicted RBP6.12□□□□□ -1.43
RFC1-202ENST00000381897 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.12□□□□□ -1.43
RFC1-202ENST00000381897 KCNG1Q9UIX4 513 aa6.12□□□□□ -1.43
RFC1-202ENST00000381897 SOCS7O14512 581 aa6.11□□□□□ -1.43
RFC1-202ENST00000381897 ORC4O43929 436 aa6.11□□□□□ -1.43
RFC1-202ENST00000381897 ANP32DO95626 131 aa6.11□□□□□ -1.43
RFC1-202ENST00000381897 SERPING1P05155 500 aa6.11□□□□□ -1.43
RFC1-202ENST00000381897 SARSP49591 514 aaKnown RBP6.11□□□□□ -1.43
RFC1-202ENST00000381897 VPS41P49754 854 aa6.11□□□□□ -1.43
RFC1-202ENST00000381897 DNAJC3Q13217 504 aa6.11□□□□□ -1.43
RFC1-202ENST00000381897 ARL6IP4Q66PJ3 421 aaKnown RBP6.11□□□□□ -1.43
RFC1-202ENST00000381897 KCNV1Q6PIU1 500 aa6.11□□□□□ -1.43
RFC1-202ENST00000381897 SLC22A25Q6T423 547 aa6.11□□□□□ -1.43
RFC1-202ENST00000381897 SLC44A2Q8IWA5 706 aaPredicted RBP6.11□□□□□ -1.43
RFC1-202ENST00000381897 SMYD4Q8IYR2 804 aaPredicted RBP6.11□□□□□ -1.43
RFC1-202ENST00000381897 UBL4BQ8N7F7 174 aa6.11□□□□□ -1.43
RFC1-202ENST00000381897 PSMA8Q8TAA3 256 aa6.11□□□□□ -1.43
RFC1-202ENST00000381897 GRAMD1AQ96CP6 724 aa6.11□□□□□ -1.43
RFC1-202ENST00000381897 CNDP1Q96KN2 507 aa6.11□□□□□ -1.43
RFC1-202ENST00000381897 MAP3K14Q99558 947 aa6.11□□□□□ -1.43
RFC1-202ENST00000381897 FAM207AQ9NSI2 230 aaPredicted RBP6.11□□□□□ -1.43
RFC1-202ENST00000381897 SLAIN2Q9P270 581 aa6.11□□□□□ -1.43
RFC1-202ENST00000381897 STOML1Q9UBI4 398 aa6.11□□□□□ -1.43
RFC1-202ENST00000381897 AMFRQ9UKV5 643 aa6.11□□□□□ -1.43
RFC1-202ENST00000381897 SLIT1O75093 1534 aa6.11□□□□□ -1.43
RFC1-202ENST00000381897 PDS5AQ29RF7 1337 aaKnown RBP6.11□□□□□ -1.43
RFC1-202ENST00000381897 PRAMEF22A3QJZ6 481 aa6.11□□□□□ -1.43
RFC1-202ENST00000381897 H3BRJ5 948 aa6.11□□□□□ -1.43
RFC1-202ENST00000381897 PTCD1O75127 700 aaKnown RBP6.11□□□□□ -1.43
RFC1-202ENST00000381897 APBA3O96018 575 aa6.11□□□□□ -1.43
RFC1-202ENST00000381897 GSTA2P09210 222 aa6.11□□□□□ -1.43
RFC1-202ENST00000381897 MPSTP25325 297 aa6.11□□□□□ -1.43
RFC1-202ENST00000381897 WASHC5Q12768 1159 aa6.11□□□□□ -1.43
RFC1-202ENST00000381897 AKNAD1Q5T1N1 836 aa6.11□□□□□ -1.43
RFC1-202ENST00000381897 NFRKBQ6P4R8 1299 aa6.11□□□□□ -1.43
RFC1-202ENST00000381897 RRP36Q96EU6 259 aaKnown RBP6.11□□□□□ -1.43
RFC1-202ENST00000381897 XAGE2Q96GT9 111 aa6.11□□□□□ -1.43
RFC1-202ENST00000381897 FGD4Q96M96 766 aa6.11□□□□□ -1.43
RFC1-202ENST00000381897 ISCUQ9H1K1 167 aa6.11□□□□□ -1.43
RFC1-202ENST00000381897 INTS13Q9NVM9 706 aa6.11□□□□□ -1.43
RFC1-202ENST00000381897 ACTR10Q9NZ32 417 aa6.11□□□□□ -1.43
RFC1-202ENST00000381897 IFT80Q9P2H3 777 aaPredicted RBP6.11□□□□□ -1.43
RFC1-202ENST00000381897 LIMD1Q9UGP4 676 aa6.11□□□□□ -1.43
RFC1-202ENST00000381897 DDX20Q9UHI6 824 aaKnown RBP6.11□□□□□ -1.43
RFC1-202ENST00000381897 PCDHB6Q9Y5E3 794 aa6.11□□□□□ -1.43
RFC1-202ENST00000381897 FOXN1O15353 648 aa6.11□□□□□ -1.43
RFC1-202ENST00000381897 ASAP2O43150 1006 aa6.11□□□□□ -1.43
RFC1-202ENST00000381897 RANBP6O60518 1105 aaKnown RBP6.11□□□□□ -1.43
RFC1-202ENST00000381897 KRT14P02533 472 aa6.11□□□□□ -1.43
RFC1-202ENST00000381897 POTEJP0CG39 1038 aa6.11□□□□□ -1.43
RFC1-202ENST00000381897 SRGNP10124 158 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms