RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 NOL3O60936 208 aaKnown RBP18.38■□□□□ 0.53
SGCB-201ENST00000381431 EYA4O95677 639 aa18.38■□□□□ 0.53
SGCB-201ENST00000381431 SEMA3FQ13275 785 aa18.38■□□□□ 0.53
SGCB-201ENST00000381431 LRRC14Q15048 493 aa18.38■□□□□ 0.53
SGCB-201ENST00000381431 C1orf54Q8WWF1 131 aa18.38■□□□□ 0.53
SGCB-201ENST00000381431 NLRP7Q8WX94 980 aa18.38■□□□□ 0.53
SGCB-201ENST00000381431 RNPC3Q96LT9 517 aaKnown RBP18.38■□□□□ 0.53
SGCB-201ENST00000381431 PITPNM3Q9BZ71 974 aa18.38■□□□□ 0.53
SGCB-201ENST00000381431 RASA4BC9J798 803 aa18.38■□□□□ 0.53
SGCB-201ENST00000381431 RASA4O43374 803 aa18.38■□□□□ 0.53
SGCB-201ENST00000381431 PLEKP08567 350 aaPredicted RBP18.38■□□□□ 0.53
SGCB-201ENST00000381431 JAK3P52333 1124 aa18.38■□□□□ 0.53
SGCB-201ENST00000381431 CENPUQ71F23 418 aa18.38■□□□□ 0.53
SGCB-201ENST00000381431 HSPH1Q92598 858 aa18.38■□□□□ 0.53
SGCB-201ENST00000381431 MAP3K14Q99558 947 aa18.38■□□□□ 0.53
SGCB-201ENST00000381431 SLC38A10Q9HBR0 1119 aa18.38■□□□□ 0.53
SGCB-201ENST00000381431 SOX5P35711 763 aa18.38■□□□□ 0.53
SGCB-201ENST00000381431 KRT39Q6A163 491 aa18.38■□□□□ 0.53
SGCB-201ENST00000381431 SLFN12LQ6IEE8 588 aa18.38■□□□□ 0.53
SGCB-201ENST00000381431 SP8Q8IXZ3 490 aa18.38■□□□□ 0.53
SGCB-201ENST00000381431 TMEM35BQ8NCS4 154 aa18.38■□□□□ 0.53
SGCB-201ENST00000381431 PCSK1NQ9UHG2 260 aa18.38■□□□□ 0.53
SGCB-201ENST00000381431 GALCP54803 685 aa18.37■□□□□ 0.53
SGCB-201ENST00000381431 ZNF667Q5HYK9 610 aa18.37■□□□□ 0.53
SGCB-201ENST00000381431 FRMD5Q7Z6J6 570 aa18.37■□□□□ 0.53
SGCB-201ENST00000381431 WRNIP1Q96S55 665 aa18.37■□□□□ 0.53
SGCB-201ENST00000381431 FAM49AQ9H0Q0 323 aaPredicted RBP18.37■□□□□ 0.53
SGCB-201ENST00000381431 RPF1Q9H9Y2 349 aaKnown RBP18.37■□□□□ 0.53
SGCB-201ENST00000381431 RBM12Q9NTZ6 932 aaKnown RBP18.37■□□□□ 0.53
SGCB-201ENST00000381431 G3BP2Q9UN86 482 aaKnown RBP18.37■□□□□ 0.53
SGCB-201ENST00000381431 FHOD1Q9Y613 1164 aa18.37■□□□□ 0.53
SGCB-201ENST00000381431 PMS2P54278 862 aa18.37■□□□□ 0.53
SGCB-201ENST00000381431 NTRK3Q16288 839 aa18.37■□□□□ 0.53
SGCB-201ENST00000381431 CCDC137Q6PK04 289 aaKnown RBP18.37■□□□□ 0.53
SGCB-201ENST00000381431 CCNI2Q6ZMN8 369 aaPredicted RBP18.37■□□□□ 0.53
SGCB-201ENST00000381431 RAPH1Q70E73 1250 aa18.37■□□□□ 0.53
SGCB-201ENST00000381431 RSRC2Q7L4I2 434 aaKnown RBP18.37■□□□□ 0.53
SGCB-201ENST00000381431 RTKN2Q8IZC4 609 aa18.37■□□□□ 0.53
SGCB-201ENST00000381431 MCUQ8NE86 351 aa18.37■□□□□ 0.53
SGCB-201ENST00000381431 OVOS2A0A0G2JMS6 1433 aa18.37■□□□□ 0.53
SGCB-201ENST00000381431 CYP26A1O43174 497 aa18.37■□□□□ 0.53
SGCB-201ENST00000381431 ZBED1O96006 694 aa18.37■□□□□ 0.53
SGCB-201ENST00000381431 GSTA1P08263 222 aa18.37■□□□□ 0.53
SGCB-201ENST00000381431 GSTA2P09210 222 aa18.37■□□□□ 0.53
SGCB-201ENST00000381431 PLS3P13797 630 aa18.37■□□□□ 0.53
SGCB-201ENST00000381431 ECE1P42892 770 aa18.37■□□□□ 0.53
SGCB-201ENST00000381431 KRT76Q01546 638 aa18.37■□□□□ 0.53
SGCB-201ENST00000381431 SPC25Q9HBM1 224 aa18.37■□□□□ 0.53
SGCB-201ENST00000381431 SCINQ9Y6U3 715 aa18.37■□□□□ 0.53
SGCB-201ENST00000381431 SSU72P8A0A1W2PR75 194 aa18.37■□□□□ 0.53
SGCB-201ENST00000381431 GMNCA6NCL1 334 aa18.37■□□□□ 0.53
SGCB-201ENST00000381431 MED7O43513 233 aa18.37■□□□□ 0.53
SGCB-201ENST00000381431 KRT14P02533 472 aa18.37■□□□□ 0.53
SGCB-201ENST00000381431 SERPINB6P35237 376 aa18.37■□□□□ 0.53
SGCB-201ENST00000381431 ZC2HC1CQ53FD0 456 aaPredicted RBP18.37■□□□□ 0.53
SGCB-201ENST00000381431 ATP6V0A4Q9HBG4 840 aa18.37■□□□□ 0.53
SGCB-201ENST00000381431 EHD2Q9NZN4 543 aa18.37■□□□□ 0.53
SGCB-201ENST00000381431 DUSP10Q9Y6W6 482 aa18.37■□□□□ 0.53
SGCB-201ENST00000381431 MKRN3Q13064 507 aaKnown RBP18.36■□□□□ 0.53
SGCB-201ENST00000381431 NCAPHQ15003 741 aa18.36■□□□□ 0.53
SGCB-201ENST00000381431 PCGF5Q86SE9 256 aa18.36■□□□□ 0.53
SGCB-201ENST00000381431 ATP6V1G3Q96LB4 118 aa18.36■□□□□ 0.53
SGCB-201ENST00000381431 RPS6KC1Q96S38 1066 aa18.36■□□□□ 0.53
SGCB-201ENST00000381431 KLRC1P26715 233 aa18.36■□□□□ 0.53
SGCB-201ENST00000381431 CHRNA5P30532 468 aa18.36■□□□□ 0.53
SGCB-201ENST00000381431 ARL4AP40617 200 aa18.36■□□□□ 0.53
SGCB-201ENST00000381431 PPP2R2AP63151 447 aa18.36■□□□□ 0.53
SGCB-201ENST00000381431 SLC27A3Q5K4L6 730 aa18.36■□□□□ 0.53
SGCB-201ENST00000381431 GBP5Q96PP8 586 aa18.36■□□□□ 0.53
SGCB-201ENST00000381431 L2HGDHQ9H9P8 463 aa18.36■□□□□ 0.53
SGCB-201ENST00000381431 SLC5A4Q9NY91 659 aa18.36■□□□□ 0.53
SGCB-201ENST00000381431 FEM1BQ9UK73 627 aa18.36■□□□□ 0.53
SGCB-201ENST00000381431 SCAF8Q9UPN6 1271 aaKnown RBP18.36■□□□□ 0.53
SGCB-201ENST00000381431 AFF2P51816 1311 aa18.36■□□□□ 0.53
SGCB-201ENST00000381431 SH3BP5O60239 455 aa18.36■□□□□ 0.53
SGCB-201ENST00000381431 MYBP10242 640 aa18.36■□□□□ 0.53
SGCB-201ENST00000381431 MAPK6Q16659 721 aa18.36■□□□□ 0.53
SGCB-201ENST00000381431 TXNRD3Q86VQ6 643 aa18.36■□□□□ 0.53
SGCB-201ENST00000381431 NSUN6Q8TEA1 469 aaKnown RBP18.36■□□□□ 0.53
SGCB-201ENST00000381431 CFAP36Q96G28 342 aa18.36■□□□□ 0.53
SGCB-201ENST00000381431 ACTR5Q9H9F9 607 aaPredicted RBP18.36■□□□□ 0.53
SGCB-201ENST00000381431 COL3A1P02461 1466 aaPredicted RBP18.36■□□□□ 0.53
SGCB-201ENST00000381431 TARSL2A2RTX5 802 aaKnown RBP18.35■□□□□ 0.53
SGCB-201ENST00000381431 TTI1O43156 1089 aa18.35■□□□□ 0.53
SGCB-201ENST00000381431 TOM1L1O75674 476 aa18.35■□□□□ 0.53
SGCB-201ENST00000381431 ERVK-24P63145 666 aa18.35■□□□□ 0.53
SGCB-201ENST00000381431 C16orf86Q6ZW13 317 aa18.35■□□□□ 0.53
SGCB-201ENST00000381431 SNX25Q9H3E2 840 aa18.35■□□□□ 0.53
SGCB-201ENST00000381431 JMJD4Q9H9V9 463 aa18.35■□□□□ 0.53
SGCB-201ENST00000381431 LRRC4Q9HBW1 653 aa18.35■□□□□ 0.53
SGCB-201ENST00000381431 ZC3H13Q5T200 1668 aaKnown RBP18.35■□□□□ 0.53
SGCB-201ENST00000381431 PLEKHG2Q9H7P9 1386 aa18.35■□□□□ 0.53
SGCB-201ENST00000381431 OPHN1O60890 802 aa18.35■□□□□ 0.53
SGCB-201ENST00000381431 GPC4O75487 556 aa18.35■□□□□ 0.53
SGCB-201ENST00000381431 TJP3O95049 919 aa18.35■□□□□ 0.53
SGCB-201ENST00000381431 BRAFP15056 766 aa18.35■□□□□ 0.53
SGCB-201ENST00000381431 EPHA7Q15375 998 aa18.35■□□□□ 0.53
SGCB-201ENST00000381431 CDC42EP5Q6NZY7 148 aa18.35■□□□□ 0.53
SGCB-201ENST00000381431 TTC17Q96AE7 1141 aa18.35■□□□□ 0.53
SGCB-201ENST00000381431 ADAM33Q9BZ11 813 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms