RNA–Protein interactions for RNA: ENST00000380746.8

DNMT3A-203, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-203ENST00000380746 SWSAP1Q6NVH7 229 aa11.87□□□□□ -0.51
DNMT3A-203ENST00000380746 CDR2LQ86X02 465 aaPredicted RBP11.87□□□□□ -0.51
DNMT3A-203ENST00000380746 RPUSD2Q8IZ73 545 aaKnown RBP11.87□□□□□ -0.51
DNMT3A-203ENST00000380746 PGRMC1O00264 195 aaKnown RBP11.86□□□□□ -0.51
DNMT3A-203ENST00000380746 EBAG9O00559 213 aa11.86□□□□□ -0.51
DNMT3A-203ENST00000380746 ERLIN2O94905 339 aa11.86□□□□□ -0.51
DNMT3A-203ENST00000380746 MXI1P50539 228 aa11.86□□□□□ -0.51
DNMT3A-203ENST00000380746 SEC24CP53992 1094 aa11.86□□□□□ -0.51
DNMT3A-203ENST00000380746 TUBB4BP68371 445 aa11.86□□□□□ -0.51
DNMT3A-203ENST00000380746 HP1BP3Q5SSJ5 553 aaPredicted RBP11.86□□□□□ -0.51
DNMT3A-203ENST00000380746 HAUS6Q7Z4H7 955 aa11.86□□□□□ -0.51
DNMT3A-203ENST00000380746 CBWD2Q8IUF1 395 aa11.86□□□□□ -0.51
DNMT3A-203ENST00000380746 FLAD1Q8NFF5 587 aa11.86□□□□□ -0.51
DNMT3A-203ENST00000380746 CASKIN2Q8WXE0 1202 aa11.86□□□□□ -0.51
DNMT3A-203ENST00000380746 ATG4CQ96DT6 458 aa11.86□□□□□ -0.51
DNMT3A-203ENST00000380746 FAM213AQ9BRX8 229 aa11.86□□□□□ -0.51
DNMT3A-203ENST00000380746 HEMGNQ9BXL5 484 aa11.86□□□□□ -0.51
DNMT3A-203ENST00000380746 PICK1Q9NRD5 415 aa11.86□□□□□ -0.51
DNMT3A-203ENST00000380746 GABBR1Q9UBS5 961 aa11.86□□□□□ -0.51
DNMT3A-203ENST00000380746 ASTN1O14525 1302 aa11.86□□□□□ -0.51
DNMT3A-203ENST00000380746 SSU72P8A0A1W2PR75 194 aa11.86□□□□□ -0.51
DNMT3A-203ENST00000380746 TGFB1I1O43294 461 aa11.86□□□□□ -0.51
DNMT3A-203ENST00000380746 ASNSP08243 561 aa11.86□□□□□ -0.51
DNMT3A-203ENST00000380746 BCRP11274 1271 aa11.86□□□□□ -0.51
DNMT3A-203ENST00000380746 ITGB5P18084 799 aa11.86□□□□□ -0.51
DNMT3A-203ENST00000380746 CXCL9Q07325 125 aa11.86□□□□□ -0.51
DNMT3A-203ENST00000380746 PPP1R7Q15435 360 aa11.86□□□□□ -0.51
DNMT3A-203ENST00000380746 FAM182AQ5T1J6 154 aa11.86□□□□□ -0.51
DNMT3A-203ENST00000380746 RNF207Q6ZRF8 634 aa11.86□□□□□ -0.51
DNMT3A-203ENST00000380746 MAGOHBQ96A72 148 aaKnown RBP11.86□□□□□ -0.51
DNMT3A-203ENST00000380746 FNBP1Q96RU3 617 aa11.86□□□□□ -0.51
DNMT3A-203ENST00000380746 WRNIP1Q96S55 665 aa11.86□□□□□ -0.51
DNMT3A-203ENST00000380746 MLXIPLQ9NP71 852 aa11.86□□□□□ -0.51
DNMT3A-203ENST00000380746 DENND3A2RUS2 1198 aa11.85□□□□□ -0.51
DNMT3A-203ENST00000380746 DDX3XO00571 662 aaKnown RBP eCLIP11.85□□□□□ -0.51
DNMT3A-203ENST00000380746 OPLAHO14841 1288 aa11.85□□□□□ -0.51
DNMT3A-203ENST00000380746 ATP9AO75110 1047 aa11.85□□□□□ -0.51
DNMT3A-203ENST00000380746 ZBED4O75132 1171 aa11.85□□□□□ -0.51
DNMT3A-203ENST00000380746 SYF2O95926 243 aaKnown RBP11.85□□□□□ -0.51
DNMT3A-203ENST00000380746 HOXD13P35453 343 aa11.85□□□□□ -0.51
DNMT3A-203ENST00000380746 IFNAR2P48551 515 aa11.85□□□□□ -0.51
DNMT3A-203ENST00000380746 KAZNQ674X7 775 aa11.85□□□□□ -0.51
DNMT3A-203ENST00000380746 FRMD5Q7Z6J6 570 aa11.85□□□□□ -0.51
DNMT3A-203ENST00000380746 GOLGA5Q8TBA6 731 aa11.85□□□□□ -0.51
DNMT3A-203ENST00000380746 LENG9Q96B70 501 aa11.85□□□□□ -0.51
DNMT3A-203ENST00000380746 PAIP2Q9BPZ3 127 aaKnown RBP11.85□□□□□ -0.51
DNMT3A-203ENST00000380746 RPAP3Q9H6T3 665 aaPredicted RBP11.85□□□□□ -0.51
DNMT3A-203ENST00000380746 UTP11Q9Y3A2 253 aaKnown RBP11.85□□□□□ -0.51
DNMT3A-203ENST00000380746 ABCA3Q99758 1704 aa11.85□□□□□ -0.51
DNMT3A-203ENST00000380746 GOLGA6L10A0A0M3HER8 536 aa11.85□□□□□ -0.51
DNMT3A-203ENST00000380746 FERP16591 822 aa11.85□□□□□ -0.51
DNMT3A-203ENST00000380746 ACOT2P49753 483 aa11.85□□□□□ -0.51
DNMT3A-203ENST00000380746 PSEN1P49768 467 aa11.85□□□□□ -0.51
DNMT3A-203ENST00000380746 SMTNP53814 917 aa11.85□□□□□ -0.51
DNMT3A-203ENST00000380746 ZCWPW2Q504Y3 356 aa11.85□□□□□ -0.51
DNMT3A-203ENST00000380746 FIGNQ5HY92 759 aa11.85□□□□□ -0.51
DNMT3A-203ENST00000380746 SNRNP48Q6IEG0 339 aaKnown RBP11.85□□□□□ -0.51
DNMT3A-203ENST00000380746 SUPT20HQ8NEM7 779 aa11.85□□□□□ -0.51
DNMT3A-203ENST00000380746 HNRNPLLQ8WVV9 542 aaKnown RBP11.85□□□□□ -0.51
DNMT3A-203ENST00000380746 ZNF653Q96CK0 615 aa11.85□□□□□ -0.51
DNMT3A-203ENST00000380746 ARHGEF26Q96DR7 871 aa11.85□□□□□ -0.51
DNMT3A-203ENST00000380746 IDI2Q9BXS1 227 aa11.85□□□□□ -0.51
DNMT3A-203ENST00000380746 KMT5AQ9NQR1 393 aa11.85□□□□□ -0.51
DNMT3A-203ENST00000380746 KLHL11Q9NVR0 708 aa11.85□□□□□ -0.51
DNMT3A-203ENST00000380746 COL20A1Q9P218 1284 aa11.85□□□□□ -0.51
DNMT3A-203ENST00000380746 NHSL1Q5SYE7 1610 aa11.85□□□□□ -0.51
DNMT3A-203ENST00000380746 MYO1CO00159 1063 aa11.85□□□□□ -0.51
DNMT3A-203ENST00000380746 YWHABP31946 246 aaKnown RBP11.85□□□□□ -0.51
DNMT3A-203ENST00000380746 VAMP7P51809 220 aa11.85□□□□□ -0.51
DNMT3A-203ENST00000380746 PLCB3Q01970 1234 aa11.85□□□□□ -0.51
DNMT3A-203ENST00000380746 ORC2Q13416 577 aaPredicted RBP11.85□□□□□ -0.51
DNMT3A-203ENST00000380746 SLC15A2Q16348 729 aa11.85□□□□□ -0.51
DNMT3A-203ENST00000380746 NBPF12Q5TAG4 269 aaPredicted RBP11.85□□□□□ -0.51
DNMT3A-203ENST00000380746 CIAPIN1Q6FI81 312 aa11.85□□□□□ -0.51
DNMT3A-203ENST00000380746 OTUD6AQ7L8S5 288 aa11.85□□□□□ -0.51
DNMT3A-203ENST00000380746 ZBTB33Q86T24 672 aa11.85□□□□□ -0.51
DNMT3A-203ENST00000380746 CPNE8Q86YQ8 564 aa11.85□□□□□ -0.51
DNMT3A-203ENST00000380746 DYDC1Q8WWB3 177 aa11.85□□□□□ -0.51
DNMT3A-203ENST00000380746 SPIRE2Q8WWL2 714 aa11.85□□□□□ -0.51
DNMT3A-203ENST00000380746 TMEM143Q96AN5 459 aa11.85□□□□□ -0.51
DNMT3A-203ENST00000380746 PPP1R9AQ9ULJ8 1098 aa11.85□□□□□ -0.51
DNMT3A-203ENST00000380746 WNT10BO00744 389 aa11.84□□□□□ -0.51
DNMT3A-203ENST00000380746 GAP43P17677 238 aa11.84□□□□□ -0.51
DNMT3A-203ENST00000380746 CD58P19256 250 aa11.84□□□□□ -0.51
DNMT3A-203ENST00000380746 TMOD1P28289 359 aa11.84□□□□□ -0.51
DNMT3A-203ENST00000380746 SOX5P35711 763 aa11.84□□□□□ -0.51
DNMT3A-203ENST00000380746 PPFIA1Q13136 1202 aa11.84□□□□□ -0.51
DNMT3A-203ENST00000380746 EDRF1Q3B7T1 1238 aa11.84□□□□□ -0.51
DNMT3A-203ENST00000380746 LLGL2Q6P1M3 1020 aa11.84□□□□□ -0.51
DNMT3A-203ENST00000380746 ZNF720Q7Z2F6 126 aa11.84□□□□□ -0.51
DNMT3A-203ENST00000380746 FAM151AQ8WW52 585 aa11.84□□□□□ -0.51
DNMT3A-203ENST00000380746 RNF146Q9NTX7 359 aa11.84□□□□□ -0.51
DNMT3A-203ENST00000380746 NOVA2Q9UNW9 492 aaKnown RBP11.84□□□□□ -0.51
DNMT3A-203ENST00000380746 TMX2Q9Y320 296 aa11.84□□□□□ -0.51
DNMT3A-203ENST00000380746 CAP2P40123 477 aa11.84□□□□□ -0.51
DNMT3A-203ENST00000380746 QARSP47897 775 aaKnown RBP11.84□□□□□ -0.51
DNMT3A-203ENST00000380746 CCDC38Q502W7 563 aa11.84□□□□□ -0.51
DNMT3A-203ENST00000380746 WDR93Q6P2C0 686 aa11.84□□□□□ -0.51
DNMT3A-203ENST00000380746 PPP4R3CPQ6ZMV5 832 aa11.84□□□□□ -0.51
DNMT3A-203ENST00000380746 PRPF38AQ8NAV1 312 aaKnown RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms