RNA–Protein interactions for RNA: ENST00000380494.9

COL4A3BP-203, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2 BASIC

Gene COL4A3BP, Length 5,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-203ENST00000380494 NCAPHQ15003 741 aa18.2■□□□□ 0.5
COL4A3BP-203ENST00000380494 MTBPQ96DY7 904 aa18.2■□□□□ 0.5
COL4A3BP-203ENST00000380494 THAP11Q96EK4 314 aa18.2■□□□□ 0.5
COL4A3BP-203ENST00000380494 FAM129AQ9BZQ8 928 aa18.2■□□□□ 0.5
COL4A3BP-203ENST00000380494 SSU72P8A0A1W2PR75 194 aa18.19■□□□□ 0.5
COL4A3BP-203ENST00000380494 PHF2O75151 1096 aa18.19■□□□□ 0.5
COL4A3BP-203ENST00000380494 E2F6O75461 281 aa18.19■□□□□ 0.5
COL4A3BP-203ENST00000380494 SMARCA1P28370 1054 aa18.19■□□□□ 0.5
COL4A3BP-203ENST00000380494 PDIA2Q13087 525 aaKnown RBP18.19■□□□□ 0.5
COL4A3BP-203ENST00000380494 FLOT2Q14254 428 aa18.19■□□□□ 0.5
COL4A3BP-203ENST00000380494 ZNF710Q8N1W2 664 aa18.19■□□□□ 0.5
COL4A3BP-203ENST00000380494 RANBP17Q9H2T7 1088 aaKnown RBP18.19■□□□□ 0.5
COL4A3BP-203ENST00000380494 SUCLA2Q9P2R7 463 aaPredicted RBP18.19■□□□□ 0.5
COL4A3BP-203ENST00000380494 PPME1Q9Y570 386 aa18.19■□□□□ 0.5
COL4A3BP-203ENST00000380494 PRKAB2O43741 272 aa18.19■□□□□ 0.5
COL4A3BP-203ENST00000380494 ITIH4Q14624 930 aa18.19■□□□□ 0.5
COL4A3BP-203ENST00000380494 DPF2Q92785 391 aa18.19■□□□□ 0.5
COL4A3BP-203ENST00000380494 KIAA1586Q9HCI6 787 aa18.19■□□□□ 0.5
COL4A3BP-203ENST00000380494 ASNSD1Q9NWL6 643 aa18.19■□□□□ 0.5
COL4A3BP-203ENST00000380494 MED14O60244 1454 aa18.19■□□□□ 0.5
COL4A3BP-203ENST00000380494 DAB1O75553 588 aa18.19■□□□□ 0.5
COL4A3BP-203ENST00000380494 PLEKHA8P1O95397 391 aa18.19■□□□□ 0.5
COL4A3BP-203ENST00000380494 IL10P22301 178 aa18.19■□□□□ 0.5
COL4A3BP-203ENST00000380494 PAPOLAP51003 745 aaKnown RBP18.19■□□□□ 0.5
COL4A3BP-203ENST00000380494 SLC12A1Q13621 1099 aa18.19■□□□□ 0.5
COL4A3BP-203ENST00000380494 TMEM259Q4ZIN3 620 aa18.19■□□□□ 0.5
COL4A3BP-203ENST00000380494 TMTC4Q5T4D3 741 aa18.19■□□□□ 0.5
COL4A3BP-203ENST00000380494 HSPH1Q92598 858 aa18.19■□□□□ 0.5
COL4A3BP-203ENST00000380494 PBXIP1Q96AQ6 731 aa18.19■□□□□ 0.5
COL4A3BP-203ENST00000380494 NOD2Q9HC29 1040 aa18.19■□□□□ 0.5
COL4A3BP-203ENST00000380494 LEMD3Q9Y2U8 911 aa18.19■□□□□ 0.5
COL4A3BP-203ENST00000380494 ATICP31939 592 aa18.19■□□□□ 0.5
COL4A3BP-203ENST00000380494 IZUMO3Q5VZ72 239 aa18.19■□□□□ 0.5
COL4A3BP-203ENST00000380494 POTEAQ6S8J7 498 aa18.19■□□□□ 0.5
COL4A3BP-203ENST00000380494 ZBED8Q8IZ13 594 aa18.19■□□□□ 0.5
COL4A3BP-203ENST00000380494 TRABDQ9H4I3 376 aa18.19■□□□□ 0.5
COL4A3BP-203ENST00000380494 METTL16Q86W50 562 aaKnown RBP18.18■□□□□ 0.5
COL4A3BP-203ENST00000380494 KIAA2013Q8IYS2 634 aa18.18■□□□□ 0.5
COL4A3BP-203ENST00000380494 SNX25Q9H3E2 840 aa18.18■□□□□ 0.5
COL4A3BP-203ENST00000380494 VHLP40337 213 aa18.18■□□□□ 0.5
COL4A3BP-203ENST00000380494 AARSP49588 968 aaKnown RBP eCLIP18.18■□□□□ 0.53e-6■■■■■ 61.8
COL4A3BP-203ENST00000380494 DYNLL1P63167 89 aaKnown RBP18.18■□□□□ 0.5
COL4A3BP-203ENST00000380494 CEP55Q53EZ4 464 aa18.18■□□□□ 0.5
COL4A3BP-203ENST00000380494 ELOA2Q8IYF1 753 aaPredicted RBP18.18■□□□□ 0.5
COL4A3BP-203ENST00000380494 SH2D3CQ8N5H7 860 aa18.18■□□□□ 0.5
COL4A3BP-203ENST00000380494 ADA2Q9NZK5 511 aa18.18■□□□□ 0.5
COL4A3BP-203ENST00000380494 MAGEA13PA6NCF6 341 aa18.18■□□□□ 0.5
COL4A3BP-203ENST00000380494 EIF4E1BA6NMX2 242 aaKnown RBP18.18■□□□□ 0.5
COL4A3BP-203ENST00000380494 SLC1A1P43005 524 aa18.18■□□□□ 0.5
COL4A3BP-203ENST00000380494 KRT17Q04695 432 aa18.18■□□□□ 0.5
COL4A3BP-203ENST00000380494 LRRC31Q6UY01 552 aa18.18■□□□□ 0.5
COL4A3BP-203ENST00000380494 CDHR1Q96JP9 859 aa18.18■□□□□ 0.5
COL4A3BP-203ENST00000380494 RNPC3Q96LT9 517 aaKnown RBP18.18■□□□□ 0.5
COL4A3BP-203ENST00000380494 PKD2L2Q9NZM6 624 aa18.18■□□□□ 0.5
COL4A3BP-203ENST00000380494 CCDC195A0A1B0GUA6 201 aa18.18■□□□□ 0.5
COL4A3BP-203ENST00000380494 KNOP1Q1ED39 458 aaKnown RBP18.18■□□□□ 0.5
COL4A3BP-203ENST00000380494 CYB5D1Q6P9G0 228 aa18.18■□□□□ 0.5
COL4A3BP-203ENST00000380494 RHOT1Q8IXI2 618 aa18.18■□□□□ 0.5
COL4A3BP-203ENST00000380494 CMTM5Q96DZ9 223 aa18.18■□□□□ 0.5
COL4A3BP-203ENST00000380494 MTRQ99707 1265 aa18.18■□□□□ 0.5
COL4A3BP-203ENST00000380494 INTS2Q9H0H0 1204 aaKnown RBP18.18■□□□□ 0.5
COL4A3BP-203ENST00000380494 SUGCTQ9HAC7 445 aa18.18■□□□□ 0.5
COL4A3BP-203ENST00000380494 DISP1Q96F81 1524 aa18.18■□□□□ 0.5
COL4A3BP-203ENST00000380494 A0A1W2PQJ5 194 aa18.18■□□□□ 0.5
COL4A3BP-203ENST00000380494 PHF20L1A8MW92 1017 aa18.18■□□□□ 0.5
COL4A3BP-203ENST00000380494 H2AFXP16104 143 aaPredicted RBP18.18■□□□□ 0.5
COL4A3BP-203ENST00000380494 TNFAIP1Q13829 316 aa18.18■□□□□ 0.5
COL4A3BP-203ENST00000380494 NAALADL2Q58DX5 795 aa18.18■□□□□ 0.5
COL4A3BP-203ENST00000380494 RIBC1Q8N443 379 aaPredicted RBP18.18■□□□□ 0.5
COL4A3BP-203ENST00000380494 CCDC134Q9H6E4 229 aa18.18■□□□□ 0.5
COL4A3BP-203ENST00000380494 SEPT3Q9UH03 358 aa18.18■□□□□ 0.5
COL4A3BP-203ENST00000380494 AMACRQ9UHK6 382 aa18.18■□□□□ 0.5
COL4A3BP-203ENST00000380494 TEKT2Q9UIF3 430 aa18.18■□□□□ 0.5
COL4A3BP-203ENST00000380494 SRGNP10124 158 aa18.17■□□□□ 0.5
COL4A3BP-203ENST00000380494 FGFR4P22455 802 aa18.17■□□□□ 0.5
COL4A3BP-203ENST00000380494 ZNF211Q13398 564 aaPredicted RBP18.17■□□□□ 0.5
COL4A3BP-203ENST00000380494 FRMD5Q7Z6J6 570 aa18.17■□□□□ 0.5
COL4A3BP-203ENST00000380494 NCLNQ969V3 563 aa18.17■□□□□ 0.5
COL4A3BP-203ENST00000380494 FOXP3Q9BZS1 431 aa18.17■□□□□ 0.5
COL4A3BP-203ENST00000380494 MTO1Q9Y2Z2 717 aaKnown RBP18.17■□□□□ 0.5
COL4A3BP-203ENST00000380494 ITIH2P19823 946 aa18.17■□□□□ 0.5
COL4A3BP-203ENST00000380494 TRPC1P48995 793 aa18.17■□□□□ 0.5
COL4A3BP-203ENST00000380494 OR9Q1Q8NGQ5 310 aa18.17■□□□□ 0.5
COL4A3BP-203ENST00000380494 COA7Q96BR5 231 aa18.17■□□□□ 0.5
COL4A3BP-203ENST00000380494 STRBPQ96SI9 672 aaKnown RBP18.17■□□□□ 0.5
COL4A3BP-203ENST00000380494 ISCUQ9H1K1 167 aa18.17■□□□□ 0.5
COL4A3BP-203ENST00000380494 KANSL2Q9H9L4 492 aa18.17■□□□□ 0.5
COL4A3BP-203ENST00000380494 SHROOM2Q13796 1616 aa18.17■□□□□ 0.5
COL4A3BP-203ENST00000380494 E7ENQ6 273 aa18.17■□□□□ 0.5
COL4A3BP-203ENST00000380494 ZNF185O15231 689 aa18.17■□□□□ 0.5
COL4A3BP-203ENST00000380494 MAP3K7CLP57077 242 aa18.17■□□□□ 0.5
COL4A3BP-203ENST00000380494 ARL13BQ3SXY8 428 aa18.17■□□□□ 0.5
COL4A3BP-203ENST00000380494 CEP170P1Q96L14 293 aa18.17■□□□□ 0.5
COL4A3BP-203ENST00000380494 ANKRD27Q96NW4 1050 aa18.17■□□□□ 0.5
COL4A3BP-203ENST00000380494 HEMGNQ9BXL5 484 aa18.17■□□□□ 0.5
COL4A3BP-203ENST00000380494 VCPKMTQ9H867 229 aa18.17■□□□□ 0.5
COL4A3BP-203ENST00000380494 LY9Q9HBG7 655 aa18.17■□□□□ 0.5
COL4A3BP-203ENST00000380494 NDUFA13Q9P0J0 144 aa18.17■□□□□ 0.5
COL4A3BP-203ENST00000380494 CDH16O75309 829 aa18.17■□□□□ 0.5
COL4A3BP-203ENST00000380494 SOX5P35711 763 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms