RNA–Protein interactions for RNA: ENST00000380071.7

RFC3-201, Transcript of replication factor C subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC3, Length 2,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-201ENST00000380071 MIGA2Q7L4E1 593 aa13.2□□□□□ -0.3
RFC3-201ENST00000380071 SYCP3Q8IZU3 236 aa13.2□□□□□ -0.3
RFC3-201ENST00000380071 C7orf43Q8WVR3 580 aa13.2□□□□□ -0.3
RFC3-201ENST00000380071 ATP6V1G3Q96LB4 118 aa13.2□□□□□ -0.3
RFC3-201ENST00000380071 THAP2Q9H0W7 228 aa13.2□□□□□ -0.3
RFC3-201ENST00000380071 GOPCQ9HD26 462 aa13.2□□□□□ -0.3
RFC3-201ENST00000380071 SEL1LQ9UBV2 794 aa13.2□□□□□ -0.3
RFC3-201ENST00000380071 APEX2Q9UBZ4 518 aa13.2□□□□□ -0.3
RFC3-201ENST00000380071 ATP8B3O60423 1300 aa13.19□□□□□ -0.3
RFC3-201ENST00000380071 H0YGN5 161 aa13.19□□□□□ -0.3
RFC3-201ENST00000380071 IPO5O00410 1097 aaKnown RBP13.19□□□□□ -0.3
RFC3-201ENST00000380071 EBAG9O00559 213 aa13.19□□□□□ -0.3
RFC3-201ENST00000380071 DDX3YO15523 660 aaKnown RBP13.19□□□□□ -0.3
RFC3-201ENST00000380071 CLSTN1O94985 981 aa13.19□□□□□ -0.3
RFC3-201ENST00000380071 FGGP02679 453 aa13.19□□□□□ -0.3
RFC3-201ENST00000380071 NR1D1P20393 614 aa13.19□□□□□ -0.3
RFC3-201ENST00000380071 TNFAIP3P21580 790 aa13.19□□□□□ -0.3
RFC3-201ENST00000380071 MYL7Q01449 175 aa13.19□□□□□ -0.3
RFC3-201ENST00000380071 BFSP1Q12934 665 aa13.19□□□□□ -0.3
RFC3-201ENST00000380071 CUL1Q13616 776 aa13.19□□□□□ -0.3
RFC3-201ENST00000380071 ADAT2Q7Z6V5 191 aaKnown RBP13.19□□□□□ -0.3
RFC3-201ENST00000380071 PACS2Q86VP3 889 aa13.19□□□□□ -0.3
RFC3-201ENST00000380071 LMO3Q8TAP4 145 aa13.19□□□□□ -0.3
RFC3-201ENST00000380071 STRA6Q9BX79 667 aa13.19□□□□□ -0.3
RFC3-201ENST00000380071 CENPHQ9H3R5 247 aa13.19□□□□□ -0.3
RFC3-201ENST00000380071 ODF2LQ9ULJ1 636 aa13.19□□□□□ -0.3
RFC3-201ENST00000380071 ZBTB21Q9ULJ3 1066 aa13.19□□□□□ -0.3
RFC3-201ENST00000380071 MRPL11Q9Y3B7 192 aaKnown RBP13.19□□□□□ -0.3
RFC3-201ENST00000380071 NFS1Q9Y697 457 aa13.19□□□□□ -0.3
RFC3-201ENST00000380071 RBBP6Q7Z6E9 1792 aaKnown RBP13.19□□□□□ -0.3
RFC3-201ENST00000380071 ARHGEF35A5YM69 484 aa13.19□□□□□ -0.3
RFC3-201ENST00000380071 CCDC188H7C350 402 aa13.19□□□□□ -0.3
RFC3-201ENST00000380071 TMEM253P0C7T8 217 aa13.19□□□□□ -0.3
RFC3-201ENST00000380071 ITGB5P18084 799 aa13.19□□□□□ -0.3
RFC3-201ENST00000380071 COPB2P35606 906 aa13.19□□□□□ -0.3
RFC3-201ENST00000380071 LDHDQ86WU2 507 aa13.19□□□□□ -0.3
RFC3-201ENST00000380071 ZSWIM2Q8NEG5 633 aa13.19□□□□□ -0.3
RFC3-201ENST00000380071 CHURC1Q8WUH1 139 aa13.19□□□□□ -0.3
RFC3-201ENST00000380071 CTNNBL1Q8WYA6 563 aaPredicted RBP13.19□□□□□ -0.3
RFC3-201ENST00000380071 RFFLQ8WZ73 363 aa13.19□□□□□ -0.3
RFC3-201ENST00000380071 SH2D3AQ9BRG2 576 aa13.19□□□□□ -0.3
RFC3-201ENST00000380071 TEKT3Q9BXF9 490 aa13.19□□□□□ -0.3
RFC3-201ENST00000380071 WDR11Q9BZH6 1224 aa13.19□□□□□ -0.3
RFC3-201ENST00000380071 TMBIM4Q9HC24 238 aa13.19□□□□□ -0.3
RFC3-201ENST00000380071 SYNPO2Q9UMS6 1093 aa13.19□□□□□ -0.3
RFC3-201ENST00000380071 COG5Q9UP83 839 aa13.19□□□□□ -0.3
RFC3-201ENST00000380071 MYH11P35749 1972 aa13.18□□□□□ -0.3
RFC3-201ENST00000380071 SPDYE2BA6NHP3 402 aa13.18□□□□□ -0.3
RFC3-201ENST00000380071 PPIP5K2O43314 1243 aa13.18□□□□□ -0.3
RFC3-201ENST00000380071 PPP1R37O75864 691 aa13.18□□□□□ -0.3
RFC3-201ENST00000380071 SPDYE6P0CI01 402 aa13.18□□□□□ -0.3
RFC3-201ENST00000380071 ITGB3BPQ13352 177 aaPredicted RBP13.18□□□□□ -0.3
RFC3-201ENST00000380071 PRPF4BQ13523 1007 aaKnown RBP13.18□□□□□ -0.3
RFC3-201ENST00000380071 PPP2R5AQ15172 486 aa13.18□□□□□ -0.3
RFC3-201ENST00000380071 EIF1ADQ8N9N8 165 aaKnown RBP13.18□□□□□ -0.3
RFC3-201ENST00000380071 SLC20A1Q8WUM9 679 aa13.18□□□□□ -0.3
RFC3-201ENST00000380071 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.18□□□□□ -0.3
RFC3-201ENST00000380071 AGBL1Q96MI9 1066 aa13.18□□□□□ -0.3
RFC3-201ENST00000380071 DPH5Q9H2P9 285 aa13.18□□□□□ -0.3
RFC3-201ENST00000380071 FAM169AQ9Y6X4 670 aa13.18□□□□□ -0.3
RFC3-201ENST00000380071 NCANO14594 1321 aa13.18□□□□□ -0.3
RFC3-201ENST00000380071 GUCY2CP25092 1073 aa13.18□□□□□ -0.3
RFC3-201ENST00000380071 LSP1P33241 339 aa13.18□□□□□ -0.3
RFC3-201ENST00000380071 CTNNA1P35221 906 aaKnown RBP13.18□□□□□ -0.3
RFC3-201ENST00000380071 POU5F1Q01860 360 aaKnown RBP13.18□□□□□ -0.3
RFC3-201ENST00000380071 TRAF1Q13077 416 aa13.18□□□□□ -0.3
RFC3-201ENST00000380071 ZNF211Q13398 564 aaPredicted RBP13.18□□□□□ -0.3
RFC3-201ENST00000380071 EMC10Q5UCC4 262 aa13.18□□□□□ -0.3
RFC3-201ENST00000380071 PADI6Q6TGC4 694 aa13.18□□□□□ -0.3
RFC3-201ENST00000380071 STXBP4Q6ZWJ1 553 aa13.18□□□□□ -0.3
RFC3-201ENST00000380071 TRMT1LQ7Z2T5 733 aaKnown RBP13.18□□□□□ -0.3
RFC3-201ENST00000380071 MXRA8Q9BRK3 442 aa13.18□□□□□ -0.3
RFC3-201ENST00000380071 TRIM31Q9BZY9 425 aa13.18□□□□□ -0.3
RFC3-201ENST00000380071 VCPKMTQ9H867 229 aa13.18□□□□□ -0.3
RFC3-201ENST00000380071 UBE2TQ9NPD8 197 aaPredicted RBP13.18□□□□□ -0.3
RFC3-201ENST00000380071 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.18□□□□□ -0.37e-6■■■■■ 74.5
RFC3-201ENST00000380071 COL20A1Q9P218 1284 aa13.18□□□□□ -0.3
RFC3-201ENST00000380071 ZNF70Q9UC06 446 aaPredicted RBP13.18□□□□□ -0.3
RFC3-201ENST00000380071 UBE4BO95155 1302 aa13.17□□□□□ -0.3
RFC3-201ENST00000380071 K7ENM7 598 aa13.17□□□□□ -0.3
RFC3-201ENST00000380071 NDUFAB1O14561 156 aa13.17□□□□□ -0.3
RFC3-201ENST00000380071 MUTP22033 750 aa13.17□□□□□ -0.3
RFC3-201ENST00000380071 HPDP32754 393 aaPredicted RBP13.17□□□□□ -0.3
RFC3-201ENST00000380071 PPP3CAQ08209 521 aa13.17□□□□□ -0.3
RFC3-201ENST00000380071 GRIPAP1Q4V328 841 aa13.17□□□□□ -0.3
RFC3-201ENST00000380071 AADACL2Q6P093 401 aa13.17□□□□□ -0.3
RFC3-201ENST00000380071 ARHGEF19Q8IW93 802 aa13.17□□□□□ -0.3
RFC3-201ENST00000380071 CCDC26Q8TAB7 109 aa13.17□□□□□ -0.3
RFC3-201ENST00000380071 UBLCP1Q8WVY7 318 aaPredicted RBP13.17□□□□□ -0.3
RFC3-201ENST00000380071 TRIM51Q9BSJ1 452 aa13.17□□□□□ -0.3
RFC3-201ENST00000380071 SLITRK6Q9H5Y7 841 aa13.17□□□□□ -0.3
RFC3-201ENST00000380071 TMOD2Q9NZR1 351 aa13.17□□□□□ -0.3
RFC3-201ENST00000380071 KCND2Q9NZV8 630 aa13.17□□□□□ -0.3
RFC3-201ENST00000380071 CHORDC1Q9UHD1 332 aaPredicted RBP13.17□□□□□ -0.3
RFC3-201ENST00000380071 ZBTB12Q9Y330 459 aaPredicted RBP13.17□□□□□ -0.3
RFC3-201ENST00000380071 EMSYQ7Z589 1322 aa13.17□□□□□ -0.3
RFC3-201ENST00000380071 HMGB1P1B2RPK0 211 aaPredicted RBP13.17□□□□□ -0.3
RFC3-201ENST00000380071 PLSCR1O15162 318 aa13.17□□□□□ -0.3
RFC3-201ENST00000380071 C21orf2O43822 256 aa13.17□□□□□ -0.3
RFC3-201ENST00000380071 RAD17O75943 681 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms