RNA–Protein interactions for RNA: ENST00000379236.3

TNFRSF4-201, Transcript of TNF receptor superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF4, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-201ENST00000379236 TTC28Q96AY4 2481 aa27.55■■■□□ 2
TNFRSF4-201ENST00000379236 NCK2O43639 380 aa27.55■■■□□ 2
TNFRSF4-201ENST00000379236 GAS2O43903 313 aaKnown RBP27.55■■■□□ 2
TNFRSF4-201ENST00000379236 MCM7P33993 719 aa27.55■■■□□ 2
TNFRSF4-201ENST00000379236 CATSPER4Q7RTX7 472 aa27.55■■■□□ 2
TNFRSF4-201ENST00000379236 ECHDC2Q86YB7 292 aa27.55■■■□□ 2
TNFRSF4-201ENST00000379236 KIF2CQ99661 725 aa27.55■■■□□ 2
TNFRSF4-201ENST00000379236 TMEM117Q9H0C3 514 aa27.55■■■□□ 2
TNFRSF4-201ENST00000379236 CHST12Q9NRB3 414 aa27.55■■■□□ 2
TNFRSF4-201ENST00000379236 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP27.54■■■□□ 2
TNFRSF4-201ENST00000379236 ITGB1P05556 798 aa27.54■■■□□ 2
TNFRSF4-201ENST00000379236 EMC2Q15006 297 aa27.54■■■□□ 2
TNFRSF4-201ENST00000379236 CSPP1Q1MSJ5 1256 aa27.54■■■□□ 2
TNFRSF4-201ENST00000379236 KSR1Q8IVT5 923 aa27.54■■■□□ 2
TNFRSF4-201ENST00000379236 PABPC5Q96DU9 382 aaKnown RBP27.54■■■□□ 2
TNFRSF4-201ENST00000379236 MTRQ99707 1265 aa27.54■■■□□ 2
TNFRSF4-201ENST00000379236 FOXP1Q9H334 677 aaPredicted RBP27.54■■■□□ 2
TNFRSF4-201ENST00000379236 DHX33Q9H6R0 707 aaKnown RBP27.54■■■□□ 2
TNFRSF4-201ENST00000379236 TYW1Q9NV66 732 aaKnown RBP27.54■■■□□ 2
TNFRSF4-201ENST00000379236 CLDND1Q9NY35 253 aa27.54■■■□□ 2
TNFRSF4-201ENST00000379236 PIN4Q9Y237 131 aaKnown RBP27.54■■■□□ 2
TNFRSF4-201ENST00000379236 LAG3P18627 525 aa27.53■■■□□ 2
TNFRSF4-201ENST00000379236 TWF2Q6IBS0 349 aaKnown RBP27.53■■■□□ 2
TNFRSF4-201ENST00000379236 THNSL1Q8IYQ7 743 aa27.53■■■□□ 2
TNFRSF4-201ENST00000379236 ZNF579Q8NAF0 562 aaKnown RBP27.53■■■□□ 2
TNFRSF4-201ENST00000379236 POF1BQ8WVV4 589 aa27.53■■■□□ 2
TNFRSF4-201ENST00000379236 TMEM143Q96AN5 459 aa27.53■■■□□ 2
TNFRSF4-201ENST00000379236 NECAB3Q96P71 396 aaPredicted RBP27.53■■■□□ 2
TNFRSF4-201ENST00000379236 WNT7AO00755 349 aa27.52■■■□□ 2
TNFRSF4-201ENST00000379236 SLITRK3O94933 977 aa27.52■■■□□ 2
TNFRSF4-201ENST00000379236 EOMESO95936 686 aa27.52■■■□□ 2
TNFRSF4-201ENST00000379236 SKIP12755 728 aa27.52■■■□□ 2
TNFRSF4-201ENST00000379236 LEXMQ3ZCV2 418 aa27.52■■■□□ 2
TNFRSF4-201ENST00000379236 LRRC43Q8N309 656 aa27.52■■■□□ 2
TNFRSF4-201ENST00000379236 FBXO18Q8NFZ0 1043 aa27.52■■■□□ 2
TNFRSF4-201ENST00000379236 SPPL3Q8TCT6 385 aa27.52■■■□□ 2
TNFRSF4-201ENST00000379236 PRPF31Q8WWY3 499 aaKnown RBP27.52■■■□□ 2
TNFRSF4-201ENST00000379236 NOL7Q9UMY1 257 aaKnown RBP27.52■■■□□ 2
TNFRSF4-201ENST00000379236 KIF3AQ9Y496 699 aa27.52■■■□□ 2
TNFRSF4-201ENST00000379236 A0A0U1RQF3 1178 aa27.51■■□□□ 1.99
TNFRSF4-201ENST00000379236 SRGAP2CP0DJJ0 459 aa27.51■■□□□ 1.99
TNFRSF4-201ENST00000379236 ORC2Q13416 577 aaPredicted RBP27.51■■□□□ 1.99
TNFRSF4-201ENST00000379236 COLGALT1Q8NBJ5 622 aa27.51■■□□□ 1.99
TNFRSF4-201ENST00000379236 MTMR9Q96QG7 549 aa27.51■■□□□ 1.99
TNFRSF4-201ENST00000379236 IGFLR1Q9H665 355 aa27.51■■□□□ 1.99
TNFRSF4-201ENST00000379236 ASAP2O43150 1006 aa27.5■■□□□ 1.99
TNFRSF4-201ENST00000379236 LAMTOR4Q0VGL1 99 aa27.5■■□□□ 1.99
TNFRSF4-201ENST00000379236 PUS10Q3MIT2 529 aaKnown RBP27.5■■□□□ 1.99
TNFRSF4-201ENST00000379236 MICAL1Q8TDZ2 1067 aa27.5■■□□□ 1.99
TNFRSF4-201ENST00000379236 ANKEF1Q9NU02 776 aa27.5■■□□□ 1.99
TNFRSF4-201ENST00000379236 NCOR1O75376 2440 aa27.49■■□□□ 1.99
TNFRSF4-201ENST00000379236 POTEMA6NI47 508 aa27.49■■□□□ 1.99
TNFRSF4-201ENST00000379236 H3BQ06 376 aaPredicted RBP27.49■■□□□ 1.99
TNFRSF4-201ENST00000379236 ZBTB39O15060 712 aa27.49■■□□□ 1.99
TNFRSF4-201ENST00000379236 UBE3AQ05086 875 aa27.49■■□□□ 1.99
TNFRSF4-201ENST00000379236 ZNF174Q15697 407 aa27.49■■□□□ 1.99
TNFRSF4-201ENST00000379236 PTCRAQ6ISU1 281 aaPredicted RBP27.49■■□□□ 1.99
TNFRSF4-201ENST00000379236 SRGAP1Q7Z6B7 1085 aa27.49■■□□□ 1.99
TNFRSF4-201ENST00000379236 HELQQ8TDG4 1101 aa27.49■■□□□ 1.99
TNFRSF4-201ENST00000379236 CASD1Q96PB1 797 aa27.49■■□□□ 1.99
TNFRSF4-201ENST00000379236 HSD17B14Q9BPX1 270 aa27.49■■□□□ 1.99
TNFRSF4-201ENST00000379236 MRPL9Q9BYD2 267 aaKnown RBP27.49■■□□□ 1.99
TNFRSF4-201ENST00000379236 TMEM60Q9H2L4 133 aa27.49■■□□□ 1.99
TNFRSF4-201ENST00000379236 CWH43Q9H720 699 aa27.49■■□□□ 1.99
TNFRSF4-201ENST00000379236 HCSTQ9UBK5 93 aa27.49■■□□□ 1.99
TNFRSF4-201ENST00000379236 FAM50BQ9Y247 325 aa27.49■■□□□ 1.99
TNFRSF4-201ENST00000379236 FGF18O76093 207 aa27.48■■□□□ 1.99
TNFRSF4-201ENST00000379236 LYPLA2O95372 231 aa27.48■■□□□ 1.99
TNFRSF4-201ENST00000379236 OR52Z1P0C646 297 aa27.48■■□□□ 1.99
TNFRSF4-201ENST00000379236 DNAJB1P25685 340 aa27.48■■□□□ 1.99
TNFRSF4-201ENST00000379236 PHKA2P46019 1235 aa27.48■■□□□ 1.99
TNFRSF4-201ENST00000379236 RAB27AP51159 221 aa27.48■■□□□ 1.99
TNFRSF4-201ENST00000379236 HYAL1Q12794 435 aa27.48■■□□□ 1.99
TNFRSF4-201ENST00000379236 TTC38Q5R3I4 469 aa27.48■■□□□ 1.99
TNFRSF4-201ENST00000379236 NOSTRINQ8IVI9 506 aa27.48■■□□□ 1.99
TNFRSF4-201ENST00000379236 ERMNQ8TAM6 284 aa27.48■■□□□ 1.99
TNFRSF4-201ENST00000379236 ZNF558Q96NG5 402 aa27.48■■□□□ 1.99
TNFRSF4-201ENST00000379236 DGAT1O75907 488 aa27.47■■□□□ 1.99
TNFRSF4-201ENST00000379236 PPM1AP35813 382 aa27.47■■□□□ 1.99
TNFRSF4-201ENST00000379236 TFDP1Q14186 410 aa27.47■■□□□ 1.99
TNFRSF4-201ENST00000379236 MXD4Q14582 209 aaPredicted RBP27.47■■□□□ 1.99
TNFRSF4-201ENST00000379236 FERMT3Q86UX7 667 aa27.47■■□□□ 1.99
TNFRSF4-201ENST00000379236 RNF149Q8NC42 400 aa27.47■■□□□ 1.99
TNFRSF4-201ENST00000379236 GADD45GIP1Q8TAE8 222 aaPredicted RBP27.47■■□□□ 1.99
TNFRSF4-201ENST00000379236 IFT122Q9HBG6 1241 aa27.47■■□□□ 1.99
TNFRSF4-201ENST00000379236 TLR9Q9NR96 1032 aa27.47■■□□□ 1.99
TNFRSF4-201ENST00000379236 RNF19AQ9NV58 838 aa27.47■■□□□ 1.99
TNFRSF4-201ENST00000379236 PUF60Q9UHX1 559 aaKnown RBP27.47■■□□□ 1.99
TNFRSF4-201ENST00000379236 ERLIN2O94905 339 aa27.46■■□□□ 1.99
TNFRSF4-201ENST00000379236 TECP42680 631 aa27.46■■□□□ 1.99
TNFRSF4-201ENST00000379236 TRAPPC10P48553 1259 aa27.46■■□□□ 1.99
TNFRSF4-201ENST00000379236 CAMK1Q14012 370 aa27.46■■□□□ 1.99
TNFRSF4-201ENST00000379236 CLLU1OSQ5K130 101 aa27.46■■□□□ 1.99
TNFRSF4-201ENST00000379236 ZNF598Q86UK7 904 aaKnown RBP27.46■■□□□ 1.99
TNFRSF4-201ENST00000379236 RSPH1Q8WYR4 309 aa27.46■■□□□ 1.99
TNFRSF4-201ENST00000379236 TUFT1Q9NNX1 390 aa27.46■■□□□ 1.99
TNFRSF4-201ENST00000379236 AGPAT5Q9NUQ2 364 aa27.46■■□□□ 1.99
TNFRSF4-201ENST00000379236 FAM105AQ9NUU6 356 aa27.46■■□□□ 1.99
TNFRSF4-201ENST00000379236 IRS1P35568 1242 aa27.45■■□□□ 1.98
TNFRSF4-201ENST00000379236 KCNT2Q6UVM3 1135 aa27.45■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms