RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 SIP14410 1827 aa13.21□□□□□ -0.29
PCNA-201ENST00000379143 VCANP13611 3396 aa13.21□□□□□ -0.3
PCNA-201ENST00000379143 A0A087WZ62 844 aa13.2□□□□□ -0.3
PCNA-201ENST00000379143 GPR182O15218 404 aa13.2□□□□□ -0.3
PCNA-201ENST00000379143 POLR2DO15514 142 aaKnown RBP13.2□□□□□ -0.3
PCNA-201ENST00000379143 EFCAB14O75071 495 aa13.2□□□□□ -0.3
PCNA-201ENST00000379143 BAIAP3O94812 1187 aa13.2□□□□□ -0.3
PCNA-201ENST00000379143 FGBP02675 491 aa13.2□□□□□ -0.3
PCNA-201ENST00000379143 GHRP10912 638 aa13.2□□□□□ -0.3
PCNA-201ENST00000379143 DARSP14868 501 aaKnown RBP13.2□□□□□ -0.3
PCNA-201ENST00000379143 PHKA2P46019 1235 aa13.2□□□□□ -0.3
PCNA-201ENST00000379143 AMPD3Q01432 767 aa13.2□□□□□ -0.3
PCNA-201ENST00000379143 PAK2Q13177 524 aa13.2□□□□□ -0.3
PCNA-201ENST00000379143 MCM6Q14566 821 aa13.2□□□□□ -0.3
PCNA-201ENST00000379143 LPIN1Q14693 890 aa13.2□□□□□ -0.3
PCNA-201ENST00000379143 GPNMBQ14956 572 aa13.2□□□□□ -0.3
PCNA-201ENST00000379143 PCBP1Q15365 356 aaKnown RBP eCLIP13.2□□□□□ -0.3
PCNA-201ENST00000379143 NAALADL2Q58DX5 795 aa13.2□□□□□ -0.3
PCNA-201ENST00000379143 GPBP1Q86WP2 473 aa13.2□□□□□ -0.3
PCNA-201ENST00000379143 MRPS27Q92552 414 aaKnown RBP13.2□□□□□ -0.3
PCNA-201ENST00000379143 DHX58Q96C10 678 aa13.2□□□□□ -0.3
PCNA-201ENST00000379143 IFT74Q96LB3 600 aa13.2□□□□□ -0.3
PCNA-201ENST00000379143 FDXACB1Q9BRP7 624 aaPredicted RBP13.2□□□□□ -0.3
PCNA-201ENST00000379143 RUSC1Q9BVN2 902 aa13.2□□□□□ -0.3
PCNA-201ENST00000379143 NFKBIZQ9BYH8 718 aa13.2□□□□□ -0.3
PCNA-201ENST00000379143 PANK2Q9BZ23 570 aa13.2□□□□□ -0.3
PCNA-201ENST00000379143 TNMDQ9H2S6 317 aa13.2□□□□□ -0.3
PCNA-201ENST00000379143 USP25Q9UHP3 1055 aa13.2□□□□□ -0.3
PCNA-201ENST00000379143 ODF2LQ9ULJ1 636 aa13.2□□□□□ -0.3
PCNA-201ENST00000379143 EYSQ5T1H1 3165 aa13.2□□□□□ -0.3
PCNA-201ENST00000379143 SCN5AQ14524 2016 aa13.2□□□□□ -0.3
PCNA-201ENST00000379143 A0A087X0B3 334 aa13.19□□□□□ -0.3
PCNA-201ENST00000379143 FAM237AA0A1B0GTK4 181 aa13.19□□□□□ -0.3
PCNA-201ENST00000379143 A0A1B0GVL5 298 aa13.19□□□□□ -0.3
PCNA-201ENST00000379143 RPS6KA5O75582 802 aa13.19□□□□□ -0.3
PCNA-201ENST00000379143 KRT18P05783 430 aaKnown RBP13.19□□□□□ -0.3
PCNA-201ENST00000379143 SRGAP2CP0DJJ0 459 aa13.19□□□□□ -0.3
PCNA-201ENST00000379143 ACRP10323 421 aa13.19□□□□□ -0.3
PCNA-201ENST00000379143 PFKFB1P16118 471 aa13.19□□□□□ -0.3
PCNA-201ENST00000379143 GLRA2P23416 452 aa13.19□□□□□ -0.3
PCNA-201ENST00000379143 NAMPTP43490 491 aa13.19□□□□□ -0.3
PCNA-201ENST00000379143 IKBKEQ14164 716 aa13.19□□□□□ -0.3
PCNA-201ENST00000379143 DHX8Q14562 1220 aaKnown RBP13.19□□□□□ -0.3
PCNA-201ENST00000379143 E2F4Q16254 413 aa13.19□□□□□ -0.3
PCNA-201ENST00000379143 ARSHQ5FYA8 562 aa13.19□□□□□ -0.3
PCNA-201ENST00000379143 TMEM240Q5SV17 173 aa13.19□□□□□ -0.3
PCNA-201ENST00000379143 CLEC17AQ6ZS10 378 aa13.19□□□□□ -0.3
PCNA-201ENST00000379143 ZNF365Q70YC5 407 aa13.19□□□□□ -0.3
PCNA-201ENST00000379143 Q7L0L9 218 aa13.19□□□□□ -0.3
PCNA-201ENST00000379143 SRGAP1Q7Z6B7 1085 aa13.19□□□□□ -0.3
PCNA-201ENST00000379143 IFNLR1Q8IU57 520 aaPredicted RBP13.19□□□□□ -0.3
PCNA-201ENST00000379143 KSR1Q8IVT5 923 aa13.19□□□□□ -0.3
PCNA-201ENST00000379143 CEP57L1Q8IYX8 460 aa13.19□□□□□ -0.3
PCNA-201ENST00000379143 DEFB123Q8N688 67 aa13.19□□□□□ -0.3
PCNA-201ENST00000379143 RNF149Q8NC42 400 aa13.19□□□□□ -0.3
PCNA-201ENST00000379143 DBF4BQ8NFT6 615 aa13.19□□□□□ -0.3
PCNA-201ENST00000379143 LRRC15Q8TF66 581 aa13.19□□□□□ -0.3
PCNA-201ENST00000379143 PPP1R16BQ96T49 567 aa13.19□□□□□ -0.3
PCNA-201ENST00000379143 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.19□□□□□ -0.39e-9■□□□□ 10.6
PCNA-201ENST00000379143 FTHL17Q9BXU8 183 aa13.19□□□□□ -0.3
PCNA-201ENST00000379143 CDHR5Q9HBB8 845 aa13.19□□□□□ -0.3
PCNA-201ENST00000379143 GPRC5CQ9NQ84 441 aa13.19□□□□□ -0.3
PCNA-201ENST00000379143 LARSQ9P2J5 1176 aaKnown RBP13.19□□□□□ -0.3
PCNA-201ENST00000379143 HPSEQ9Y251 543 aa13.19□□□□□ -0.3
PCNA-201ENST00000379143 PHLPP2Q6ZVD8 1323 aa13.19□□□□□ -0.3
PCNA-201ENST00000379143 ABHD14A-ACY1A0A1B0GW23 586 aa13.18□□□□□ -0.3
PCNA-201ENST00000379143 LRRIQ4A6NIV6 560 aa13.18□□□□□ -0.3
PCNA-201ENST00000379143 SPDYE4A6NLX3 237 aa13.18□□□□□ -0.3
PCNA-201ENST00000379143 HIP1RO75146 1068 aa13.18□□□□□ -0.3
PCNA-201ENST00000379143 SFPQP23246 707 aaKnown RBP eCLIP13.18□□□□□ -0.3
PCNA-201ENST00000379143 SYKP43405 635 aa13.18□□□□□ -0.3
PCNA-201ENST00000379143 EPHB4P54760 987 aa13.18□□□□□ -0.3
PCNA-201ENST00000379143 CAPSQ13938 189 aa13.18□□□□□ -0.3
PCNA-201ENST00000379143 C16orf59Q7L2K0 433 aa13.18□□□□□ -0.3
PCNA-201ENST00000379143 ZBTB8OSQ8IWT0 167 aa13.18□□□□□ -0.3
PCNA-201ENST00000379143 FSIP1Q8NA03 581 aa13.18□□□□□ -0.3
PCNA-201ENST00000379143 TMEM87AQ8NBN3 555 aa13.18□□□□□ -0.3
PCNA-201ENST00000379143 ASAP3Q8TDY4 903 aa13.18□□□□□ -0.3
PCNA-201ENST00000379143 TMEM40Q8WWA1 233 aa13.18□□□□□ -0.3
PCNA-201ENST00000379143 HERVK_113Q902F9 699 aa13.18□□□□□ -0.3
PCNA-201ENST00000379143 VWCEQ96DN2 955 aa13.18□□□□□ -0.3
PCNA-201ENST00000379143 CCDC34Q96HJ3 373 aa13.18□□□□□ -0.3
PCNA-201ENST00000379143 C2orf40Q9H1Z8 148 aa13.18□□□□□ -0.3
PCNA-201ENST00000379143 IFT122Q9HBG6 1241 aa13.18□□□□□ -0.3
PCNA-201ENST00000379143 KBTBD4Q9NVX7 518 aa13.18□□□□□ -0.3
PCNA-201ENST00000379143 PADI3Q9ULW8 664 aa13.18□□□□□ -0.3
PCNA-201ENST00000379143 STXBP5LQ9Y2K9 1186 aa13.18□□□□□ -0.3
PCNA-201ENST00000379143 NOC2LQ9Y3T9 749 aaKnown RBP13.18□□□□□ -0.3
PCNA-201ENST00000379143 SPTBN5Q9NRC6 3674 aaKnown RBP13.17□□□□□ -0.3
PCNA-201ENST00000379143 TBCAO75347 108 aaKnown RBP13.17□□□□□ -0.3
PCNA-201ENST00000379143 SLFN14P0C7P3 912 aa13.17□□□□□ -0.3
PCNA-201ENST00000379143 SCP2P22307 547 aa13.17□□□□□ -0.3
PCNA-201ENST00000379143 CD52P31358 61 aa13.17□□□□□ -0.3
PCNA-201ENST00000379143 NDUFA8P51970 172 aa13.17□□□□□ -0.3
PCNA-201ENST00000379143 SMTNP53814 917 aa13.17□□□□□ -0.3
PCNA-201ENST00000379143 PTENP60484 403 aa13.17□□□□□ -0.3
PCNA-201ENST00000379143 NCBP1Q09161 790 aaKnown RBP13.17□□□□□ -0.3
PCNA-201ENST00000379143 NFX1Q12986 1120 aaKnown RBP13.17□□□□□ -0.3
PCNA-201ENST00000379143 DMP1Q13316 513 aaPredicted RBP13.17□□□□□ -0.3
PCNA-201ENST00000379143 GIT2Q14161 759 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 361.8 ms