RNA–Protein interactions for RNA: ENST00000378980.7

CNTFR-202, Transcript of ciliary neurotrophic factor receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTFR, Length 2,052 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTFR-202ENST00000378980 NR3C2P08235 984 aa23.34■■□□□ 1.33
CNTFR-202ENST00000378980 PAFAH1B1P43034 410 aa23.34■■□□□ 1.33
CNTFR-202ENST00000378980 MAP9Q49MG5 647 aa23.34■■□□□ 1.33
CNTFR-202ENST00000378980 ZNF746Q6NUN9 644 aaPredicted RBP23.34■■□□□ 1.33
CNTFR-202ENST00000378980 INTS8Q75QN2 995 aaKnown RBP23.34■■□□□ 1.33
CNTFR-202ENST00000378980 HAUS6Q7Z4H7 955 aa23.34■■□□□ 1.33
CNTFR-202ENST00000378980 TRPM4Q8TD43 1214 aa23.34■■□□□ 1.33
CNTFR-202ENST00000378980 SMARCAL1Q9NZC9 954 aa23.34■■□□□ 1.33
CNTFR-202ENST00000378980 EHD2Q9NZN4 543 aa23.34■■□□□ 1.33
CNTFR-202ENST00000378980 APEX2Q9UBZ4 518 aa23.34■■□□□ 1.33
CNTFR-202ENST00000378980 KRT13P13646 458 aa23.34■■□□□ 1.33
CNTFR-202ENST00000378980 NCKAP1LP55160 1127 aa23.34■■□□□ 1.33
CNTFR-202ENST00000378980 XKR9Q5GH70 373 aa23.34■■□□□ 1.33
CNTFR-202ENST00000378980 PLA2G4FQ68DD2 849 aa23.34■■□□□ 1.33
CNTFR-202ENST00000378980 RDH13Q8NBN7 331 aa23.34■■□□□ 1.33
CNTFR-202ENST00000378980 INPP4AQ96PE3 977 aaPredicted RBP23.34■■□□□ 1.33
CNTFR-202ENST00000378980 SENP7Q9BQF6 1050 aa23.34■■□□□ 1.33
CNTFR-202ENST00000378980 PCIF1Q9H4Z3 704 aa23.34■■□□□ 1.33
CNTFR-202ENST00000378980 GPRC5CQ9NQ84 441 aa23.34■■□□□ 1.33
CNTFR-202ENST00000378980 RNF14Q9UBS8 474 aa23.34■■□□□ 1.33
CNTFR-202ENST00000378980 DOCK5Q9H7D0 1870 aa23.33■■□□□ 1.33
CNTFR-202ENST00000378980 DDX3XO00571 662 aaKnown RBP eCLIP23.33■■□□□ 1.33
CNTFR-202ENST00000378980 FAM193AP78312 1265 aa23.33■■□□□ 1.33
CNTFR-202ENST00000378980 DRAP1Q14919 205 aaPredicted RBP23.33■■□□□ 1.33
CNTFR-202ENST00000378980 NLRX1Q86UT6 975 aa23.33■■□□□ 1.33
CNTFR-202ENST00000378980 RUBCNQ92622 972 aa23.33■■□□□ 1.33
CNTFR-202ENST00000378980 CBWD1Q9BRT8 395 aa23.33■■□□□ 1.33
CNTFR-202ENST00000378980 MOV10L1Q9BXT6 1211 aaKnown RBP23.33■■□□□ 1.33
CNTFR-202ENST00000378980 GPR88Q9GZN0 384 aa23.33■■□□□ 1.33
CNTFR-202ENST00000378980 LOC285556D6RIA3 1793 aa23.33■■□□□ 1.32
CNTFR-202ENST00000378980 MAFGO15525 162 aa23.32■■□□□ 1.32
CNTFR-202ENST00000378980 EIF3JO75822 258 aaKnown RBP23.32■■□□□ 1.32
CNTFR-202ENST00000378980 NPEPPSP55786 919 aa23.32■■□□□ 1.32
CNTFR-202ENST00000378980 PEX3P56589 373 aa23.32■■□□□ 1.32
CNTFR-202ENST00000378980 TMEM132BQ14DG7 1078 aa23.32■■□□□ 1.32
CNTFR-202ENST00000378980 CFAP221Q4G0U5 840 aa23.32■■□□□ 1.32
CNTFR-202ENST00000378980 OLIG1Q8TAK6 271 aa23.32■■□□□ 1.32
CNTFR-202ENST00000378980 KLRG1Q96E93 195 aa23.32■■□□□ 1.32
CNTFR-202ENST00000378980 SSC5DA1L4H1 1573 aa23.32■■□□□ 1.32
CNTFR-202ENST00000378980 WDR90Q96KV7 1748 aa23.32■■□□□ 1.32
CNTFR-202ENST00000378980 H3BQF6 201 aa23.32■■□□□ 1.32
CNTFR-202ENST00000378980 ATP2A1O14983 1001 aa23.32■■□□□ 1.32
CNTFR-202ENST00000378980 POLR3GO15318 223 aaPredicted RBP23.32■■□□□ 1.32
CNTFR-202ENST00000378980 SLC16A4O15374 487 aa23.32■■□□□ 1.32
CNTFR-202ENST00000378980 ZMYND10O75800 440 aa23.32■■□□□ 1.32
CNTFR-202ENST00000378980 SNRPFP62306 86 aaKnown RBP23.32■■□□□ 1.32
CNTFR-202ENST00000378980 IFI16Q16666 785 aaKnown RBP23.32■■□□□ 1.32
CNTFR-202ENST00000378980 SLC17A8Q8NDX2 589 aa23.32■■□□□ 1.32
CNTFR-202ENST00000378980 LMO3Q8TAP4 145 aa23.32■■□□□ 1.32
CNTFR-202ENST00000378980 NSUN6Q8TEA1 469 aaKnown RBP23.32■■□□□ 1.32
CNTFR-202ENST00000378980 IWS1Q96ST2 819 aa23.32■■□□□ 1.32
CNTFR-202ENST00000378980 PDE11AQ9HCR9 933 aa23.32■■□□□ 1.32
CNTFR-202ENST00000378980 HSPBP1Q9NZL4 362 aa23.32■■□□□ 1.32
CNTFR-202ENST00000378980 INTUQ9ULD6 942 aa23.32■■□□□ 1.32
CNTFR-202ENST00000378980 PCDHA10Q9Y5I2 948 aa23.32■■□□□ 1.32
CNTFR-202ENST00000378980 RFX1P22670 979 aa23.31■■□□□ 1.32
CNTFR-202ENST00000378980 VAMP7P51809 220 aa23.31■■□□□ 1.32
CNTFR-202ENST00000378980 DLG4P78352 724 aa23.31■■□□□ 1.32
CNTFR-202ENST00000378980 GPS2Q13227 327 aa23.31■■□□□ 1.32
CNTFR-202ENST00000378980 FAM102BQ5T8I3 360 aa23.31■■□□□ 1.32
CNTFR-202ENST00000378980 CATSPERGQ6ZRH7 1159 aa23.31■■□□□ 1.32
CNTFR-202ENST00000378980 ANO5Q75V66 913 aa23.31■■□□□ 1.32
CNTFR-202ENST00000378980 FMNL3Q8IVF7 1028 aa23.31■■□□□ 1.32
CNTFR-202ENST00000378980 XXYLT1Q8NBI6 393 aa23.31■■□□□ 1.32
CNTFR-202ENST00000378980 SLC30A5Q8TAD4 765 aa23.31■■□□□ 1.32
CNTFR-202ENST00000378980 MS4A14Q96JA4 679 aa23.31■■□□□ 1.32
CNTFR-202ENST00000378980 LRRC1Q9BTT6 524 aa23.31■■□□□ 1.32
CNTFR-202ENST00000378980 GGA3Q9NZ52 723 aa23.31■■□□□ 1.32
CNTFR-202ENST00000378980 LCTP09848 1927 aa23.31■■□□□ 1.32
CNTFR-202ENST00000378980 EMSYQ7Z589 1322 aa23.31■■□□□ 1.32
CNTFR-202ENST00000378980 LRRIQ3A6PVS8 624 aaPredicted RBP23.31■■□□□ 1.32
CNTFR-202ENST00000378980 MAPK13O15264 365 aa23.31■■□□□ 1.32
CNTFR-202ENST00000378980 KCNA2P16389 499 aa23.31■■□□□ 1.32
CNTFR-202ENST00000378980 CCNI2Q6ZMN8 369 aaPredicted RBP23.31■■□□□ 1.32
CNTFR-202ENST00000378980 TRMT1LQ7Z2T5 733 aaKnown RBP23.31■■□□□ 1.32
CNTFR-202ENST00000378980 DNAAF5Q86Y56 855 aa23.31■■□□□ 1.32
CNTFR-202ENST00000378980 CCDC125Q86Z20 511 aa23.31■■□□□ 1.32
CNTFR-202ENST00000378980 LNX1Q8TBB1 728 aaPredicted RBP23.31■■□□□ 1.32
CNTFR-202ENST00000378980 TEX13BQ9BXU2 312 aa23.31■■□□□ 1.32
CNTFR-202ENST00000378980 GPRC5DQ9NZD1 345 aa23.31■■□□□ 1.32
CNTFR-202ENST00000378980 N4BP1O75113 896 aaKnown RBP23.3■■□□□ 1.32
CNTFR-202ENST00000378980 RGS20O76081 388 aa23.3■■□□□ 1.32
CNTFR-202ENST00000378980 H2AFZP0C0S5 128 aa23.3■■□□□ 1.32
CNTFR-202ENST00000378980 H2AFVQ71UI9 128 aa23.3■■□□□ 1.32
CNTFR-202ENST00000378980 LRRC57Q8N9N7 239 aa23.3■■□□□ 1.32
CNTFR-202ENST00000378980 SYT11Q9BT88 431 aa23.3■■□□□ 1.32
CNTFR-202ENST00000378980 PACSIN2Q9UNF0 486 aaPredicted RBP23.3■■□□□ 1.32
CNTFR-202ENST00000378980 PPP2R3BQ9Y5P8 575 aa23.3■■□□□ 1.32
CNTFR-202ENST00000378980 A0A0A6YYK5 440 aaPredicted RBP23.29■■□□□ 1.32
CNTFR-202ENST00000378980 P4HA2O15460 535 aa23.29■■□□□ 1.32
CNTFR-202ENST00000378980 MATR3P43243 847 aaKnown RBP eCLIP23.29■■□□□ 1.32
CNTFR-202ENST00000378980 NOL9Q5SY16 702 aaKnown RBP23.29■■□□□ 1.32
CNTFR-202ENST00000378980 PHLDB3Q6NSJ2 640 aa23.29■■□□□ 1.32
CNTFR-202ENST00000378980 U2AF1L4Q8WU68 220 aaKnown RBP23.29■■□□□ 1.32
CNTFR-202ENST00000378980 ACAD9Q9H845 621 aa23.29■■□□□ 1.32
CNTFR-202ENST00000378980 VIPAS39Q9H9C1 493 aa23.29■■□□□ 1.32
CNTFR-202ENST00000378980 ZCCHC17Q9NP64 241 aaKnown RBP23.29■■□□□ 1.32
CNTFR-202ENST00000378980 RBM12Q9NTZ6 932 aaKnown RBP23.29■■□□□ 1.32
CNTFR-202ENST00000378980 CYP39A1Q9NYL5 469 aa23.29■■□□□ 1.32
CNTFR-202ENST00000378980 TMOD4Q9NZQ9 345 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms