RNA–Protein interactions for RNA: ENST00000378244.6

DEPDC4-202, Transcript of DEP domain containing 4, humanhuman

TSL 2

Gene DEPDC4, Length 2,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-202ENST00000378244 CRYBB1P53674 252 aaPredicted RBP12.99□□□□□ -0.33
DEPDC4-202ENST00000378244 CAPSQ13938 189 aa12.99□□□□□ -0.33
DEPDC4-202ENST00000378244 PRPF38BQ5VTL8 546 aaKnown RBP12.99□□□□□ -0.33
DEPDC4-202ENST00000378244 BSNDQ8WZ55 320 aa12.99□□□□□ -0.33
DEPDC4-202ENST00000378244 MINDY3Q9H8M7 445 aa12.99□□□□□ -0.33
DEPDC4-202ENST00000378244 IFT122Q9HBG6 1241 aa12.99□□□□□ -0.33
DEPDC4-202ENST00000378244 CXXC1Q9P0U4 656 aaPredicted RBP12.99□□□□□ -0.33
DEPDC4-202ENST00000378244 GAS2O43903 313 aaKnown RBP12.99□□□□□ -0.33
DEPDC4-202ENST00000378244 PAK2Q13177 524 aa12.99□□□□□ -0.33
DEPDC4-202ENST00000378244 MXD4Q14582 209 aaPredicted RBP12.99□□□□□ -0.33
DEPDC4-202ENST00000378244 TMEM240Q5SV17 173 aa12.99□□□□□ -0.33
DEPDC4-202ENST00000378244 SV2BQ7L1I2 683 aa12.99□□□□□ -0.33
DEPDC4-202ENST00000378244 TMCO2Q7Z6W1 182 aaPredicted RBP12.99□□□□□ -0.33
DEPDC4-202ENST00000378244 DAW1Q8N136 415 aa12.99□□□□□ -0.33
DEPDC4-202ENST00000378244 IQUBQ8NA54 791 aa12.99□□□□□ -0.33
DEPDC4-202ENST00000378244 REEP2Q9BRK0 252 aa12.99□□□□□ -0.33
DEPDC4-202ENST00000378244 GOLPH3LQ9H4A5 285 aa12.99□□□□□ -0.33
DEPDC4-202ENST00000378244 STK17AQ9UEE5 414 aa12.99□□□□□ -0.33
DEPDC4-202ENST00000378244 GADD45BO75293 160 aaPredicted RBP12.98□□□□□ -0.33
DEPDC4-202ENST00000378244 CASP1P29466 404 aa12.98□□□□□ -0.33
DEPDC4-202ENST00000378244 AFMP43652 599 aa12.98□□□□□ -0.33
DEPDC4-202ENST00000378244 PEX3P56589 373 aa12.98□□□□□ -0.33
DEPDC4-202ENST00000378244 E2F4Q16254 413 aa12.98□□□□□ -0.33
DEPDC4-202ENST00000378244 PLEKHG4Q58EX7 1191 aa12.98□□□□□ -0.33
DEPDC4-202ENST00000378244 TSHZ1Q6ZSZ6 1077 aa12.98□□□□□ -0.33
DEPDC4-202ENST00000378244 KCTD17Q8N5Z5 321 aa12.98□□□□□ -0.33
DEPDC4-202ENST00000378244 GCOM2Q9BZD3 368 aaPredicted RBP12.98□□□□□ -0.33
DEPDC4-202ENST00000378244 ST3GAL5Q9UNP4 418 aa12.98□□□□□ -0.33
DEPDC4-202ENST00000378244 CCDC169A6NNP5 214 aa12.97□□□□□ -0.33
DEPDC4-202ENST00000378244 INO80B-WBP1J3KQ70 363 aa12.97□□□□□ -0.33
DEPDC4-202ENST00000378244 SLC26A4O43511 780 aa12.97□□□□□ -0.33
DEPDC4-202ENST00000378244 DARSP14868 501 aaKnown RBP12.97□□□□□ -0.33
DEPDC4-202ENST00000378244 RFC2P35250 354 aa12.97□□□□□ -0.33
DEPDC4-202ENST00000378244 MAPK7Q13164 816 aa12.97□□□□□ -0.33
DEPDC4-202ENST00000378244 FAM228AQ86W67 206 aa12.97□□□□□ -0.33
DEPDC4-202ENST00000378244 GRAMD1CQ8IYS0 662 aa12.97□□□□□ -0.33
DEPDC4-202ENST00000378244 MRPS27Q92552 414 aaKnown RBP12.97□□□□□ -0.33
DEPDC4-202ENST00000378244 SEPT8Q92599 483 aa12.97□□□□□ -0.33
DEPDC4-202ENST00000378244 DDX12PQ92771 950 aa12.97□□□□□ -0.33
DEPDC4-202ENST00000378244 RNPC3Q96LT9 517 aaKnown RBP12.97□□□□□ -0.33
DEPDC4-202ENST00000378244 INO80BQ9C086 356 aaPredicted RBP12.97□□□□□ -0.33
DEPDC4-202ENST00000378244 SERTAD1Q9UHV2 236 aa12.97□□□□□ -0.33
DEPDC4-202ENST00000378244 USP20Q9Y2K6 914 aa12.97□□□□□ -0.33
DEPDC4-202ENST00000378244 MYMKA6NI61 221 aa12.97□□□□□ -0.33
DEPDC4-202ENST00000378244 PRPF40AO75400 957 aaKnown RBP12.97□□□□□ -0.33
DEPDC4-202ENST00000378244 PARNO95453 639 aaKnown RBP12.97□□□□□ -0.33
DEPDC4-202ENST00000378244 CXCL10P02778 98 aa12.97□□□□□ -0.33
DEPDC4-202ENST00000378244 IDEP14735 1019 aa12.97□□□□□ -0.33
DEPDC4-202ENST00000378244 SYKP43405 635 aa12.97□□□□□ -0.33
DEPDC4-202ENST00000378244 LONRF3Q496Y0 759 aa12.97□□□□□ -0.33
DEPDC4-202ENST00000378244 PSRC1Q6PGN9 363 aaPredicted RBP12.97□□□□□ -0.33
DEPDC4-202ENST00000378244 KIFAP3Q92845 792 aa12.97□□□□□ -0.33
DEPDC4-202ENST00000378244 IFT74Q96LB3 600 aa12.97□□□□□ -0.33
DEPDC4-202ENST00000378244 BLZF1Q9H2G9 400 aa12.97□□□□□ -0.33
DEPDC4-202ENST00000378244 LTBP2Q14767 1821 aa12.97□□□□□ -0.33
DEPDC4-202ENST00000378244 ARID2Q68CP9 1835 aa12.96□□□□□ -0.33
DEPDC4-202ENST00000378244 ASAP2O43150 1006 aa12.96□□□□□ -0.33
DEPDC4-202ENST00000378244 GUCY2CP25092 1073 aa12.96□□□□□ -0.33
DEPDC4-202ENST00000378244 PHKA2P46019 1235 aa12.96□□□□□ -0.33
DEPDC4-202ENST00000378244 CDC42EP1Q00587 391 aa12.96□□□□□ -0.33
DEPDC4-202ENST00000378244 GIT2Q14161 759 aa12.96□□□□□ -0.33
DEPDC4-202ENST00000378244 IKBKEQ14164 716 aa12.96□□□□□ -0.33
DEPDC4-202ENST00000378244 TFDP1Q14186 410 aa12.96□□□□□ -0.33
DEPDC4-202ENST00000378244 FAM117BQ6P1L5 589 aa12.96□□□□□ -0.33
DEPDC4-202ENST00000378244 CATSPER4Q7RTX7 472 aa12.96□□□□□ -0.33
DEPDC4-202ENST00000378244 ZNF410Q86VK4 478 aa12.96□□□□□ -0.33
DEPDC4-202ENST00000378244 DRC1Q96MC2 740 aa12.96□□□□□ -0.33
DEPDC4-202ENST00000378244 A0A1W2PQ27 194 aa12.96□□□□□ -0.34
DEPDC4-202ENST00000378244 A0A1W2PQ64 194 aa12.96□□□□□ -0.34
DEPDC4-202ENST00000378244 A0A1W2PQD8 194 aa12.96□□□□□ -0.34
DEPDC4-202ENST00000378244 UPP2O95045 317 aa12.96□□□□□ -0.34
DEPDC4-202ENST00000378244 PFKMP08237 780 aa12.96□□□□□ -0.34
DEPDC4-202ENST00000378244 ACTN1P12814 892 aa12.96□□□□□ -0.34
DEPDC4-202ENST00000378244 NPTX2P47972 431 aa12.96□□□□□ -0.34
DEPDC4-202ENST00000378244 ODR4Q5SWX8 454 aa12.96□□□□□ -0.34
DEPDC4-202ENST00000378244 CNKSR3Q6P9H4 555 aa12.96□□□□□ -0.34
DEPDC4-202ENST00000378244 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.96□□□□□ -0.34
DEPDC4-202ENST00000378244 CDR2LQ86X02 465 aaPredicted RBP12.96□□□□□ -0.34
DEPDC4-202ENST00000378244 CEP57L1Q8IYX8 460 aa12.96□□□□□ -0.34
DEPDC4-202ENST00000378244 TDHQ8IZJ6 230 aa12.96□□□□□ -0.34
DEPDC4-202ENST00000378244 MYCT1Q8N699 235 aa12.96□□□□□ -0.34
DEPDC4-202ENST00000378244 USP38Q8NB14 1042 aa12.96□□□□□ -0.34
DEPDC4-202ENST00000378244 DEPTORQ8TB45 409 aa12.96□□□□□ -0.34
DEPDC4-202ENST00000378244 HPSEQ9Y251 543 aa12.96□□□□□ -0.34
DEPDC4-202ENST00000378244 ADGRA3Q8IWK6 1321 aa12.95□□□□□ -0.34
DEPDC4-202ENST00000378244 GPR182O15218 404 aa12.95□□□□□ -0.34
DEPDC4-202ENST00000378244 SLC16A4O15374 487 aa12.95□□□□□ -0.34
DEPDC4-202ENST00000378244 TBCAO75347 108 aaKnown RBP12.95□□□□□ -0.34
DEPDC4-202ENST00000378244 FAM13AO94988 1023 aa12.95□□□□□ -0.34
DEPDC4-202ENST00000378244 PTENP60484 403 aa12.95□□□□□ -0.34
DEPDC4-202ENST00000378244 DMP1Q13316 513 aaPredicted RBP12.95□□□□□ -0.34
DEPDC4-202ENST00000378244 CSPP1Q1MSJ5 1256 aa12.95□□□□□ -0.34
DEPDC4-202ENST00000378244 FAM109BQ6ICB4 259 aaPredicted RBP12.95□□□□□ -0.34
DEPDC4-202ENST00000378244 MYOCDQ8IZQ8 938 aa12.95□□□□□ -0.34
DEPDC4-202ENST00000378244 TMX1Q9H3N1 280 aa12.95□□□□□ -0.34
DEPDC4-202ENST00000378244 KCND2Q9NZV8 630 aa12.95□□□□□ -0.34
DEPDC4-202ENST00000378244 TBC1D7Q9P0N9 293 aa12.95□□□□□ -0.34
DEPDC4-202ENST00000378244 DENND3A2RUS2 1198 aa12.95□□□□□ -0.34
DEPDC4-202ENST00000378244 GRXCR1A8MXD5 290 aa12.95□□□□□ -0.34
DEPDC4-202ENST00000378244 ERLIN2O94905 339 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms