RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 CHAMP1Q96JM3 812 aa15.04■□□□□ -0
TRIM13-202ENST00000378182 DNAJC8O75937 253 aaPredicted RBP15.04■□□□□ -0
TRIM13-202ENST00000378182 CIAO1O76071 339 aa15.04■□□□□ -0
TRIM13-202ENST00000378182 SETSIPP0DME0 302 aa15.04■□□□□ -0
TRIM13-202ENST00000378182 LRRC74AQ0VAA2 488 aa15.04■□□□□ -0
TRIM13-202ENST00000378182 SLFNL1Q499Z3 407 aa15.04■□□□□ -0
TRIM13-202ENST00000378182 SMAD5Q99717 465 aaKnown RBP15.04■□□□□ -0
TRIM13-202ENST00000378182 TRPV6Q9H1D0 765 aa15.04■□□□□ -0
TRIM13-202ENST00000378182 ZNF235Q14590 738 aa15.04■□□□□ -0
TRIM13-202ENST00000378182 BCAS4Q8TDM0 211 aa15.04■□□□□ -0
TRIM13-202ENST00000378182 ADCK5Q3MIX3 580 aa15.04■□□□□ -0
TRIM13-202ENST00000378182 APOA5Q6Q788 366 aa15.04■□□□□ -0
TRIM13-202ENST00000378182 SRRM1Q8IYB3 904 aaKnown RBP15.04■□□□□ -0
TRIM13-202ENST00000378182 SMAP1Q8IYB5 467 aaPredicted RBP15.04■□□□□ -0
TRIM13-202ENST00000378182 RASEFQ8IZ41 740 aa15.04■□□□□ -0
TRIM13-202ENST00000378182 HS6ST3Q8IZP7 471 aa15.04■□□□□ -0
TRIM13-202ENST00000378182 DCAF4Q8WV16 495 aa15.04■□□□□ -0
TRIM13-202ENST00000378182 DHTKD1Q96HY7 919 aaPredicted RBP15.04■□□□□ -0
TRIM13-202ENST00000378182 MTIF3Q9H2K0 278 aaKnown RBP15.04■□□□□ -0
TRIM13-202ENST00000378182 MYO5CQ9NQX4 1742 aa15.04■□□□□ -0
TRIM13-202ENST00000378182 SERPING1P05155 500 aa15.04■□□□□ -0
TRIM13-202ENST00000378182 PKN3Q6P5Z2 889 aa15.04■□□□□ -0
TRIM13-202ENST00000378182 RRM2BQ7LG56 351 aa15.04■□□□□ -0
TRIM13-202ENST00000378182 ACAP3Q96P50 834 aa15.04■□□□□ -0
TRIM13-202ENST00000378182 ASNSD1Q9NWL6 643 aa15.04■□□□□ -0
TRIM13-202ENST00000378182 EIF4A3P38919 411 aaKnown RBP15.04■□□□□ -0
TRIM13-202ENST00000378182 HIF1AQ16665 826 aa15.04■□□□□ -0
TRIM13-202ENST00000378182 CENPUQ71F23 418 aa15.04■□□□□ -0
TRIM13-202ENST00000378182 CCNYL1Q8N7R7 359 aa15.04■□□□□ -0
TRIM13-202ENST00000378182 CCDC78A2IDD5 438 aa15.03■□□□□ -0
TRIM13-202ENST00000378182 PAN2Q504Q3 1202 aaKnown RBP15.03■□□□□ -0
TRIM13-202ENST00000378182 MFN1Q8IWA4 741 aa15.03■□□□□ -0
TRIM13-202ENST00000378182 EXOC4Q96A65 974 aa15.03■□□□□ -0
TRIM13-202ENST00000378182 SLC13A1Q9BZW2 595 aa15.03■□□□□ -0
TRIM13-202ENST00000378182 IQANK1A0A1B0GTG1 560 aa15.03■□□□□ -0
TRIM13-202ENST00000378182 OR1G1P47890 313 aa15.03■□□□□ -0
TRIM13-202ENST00000378182 HMGCS2P54868 508 aa15.03■□□□□ -0
TRIM13-202ENST00000378182 RNF26Q9BY78 433 aaPredicted RBP15.03■□□□□ -0
TRIM13-202ENST00000378182 ZFYVE28Q9HCC9 887 aa15.03■□□□□ -0
TRIM13-202ENST00000378182 DONSONQ9NYP3 566 aa15.03■□□□□ -0
TRIM13-202ENST00000378182 RGL1Q9NZL6 768 aa15.03■□□□□ -0
TRIM13-202ENST00000378182 ADAM22Q9P0K1 906 aa15.03■□□□□ -0
TRIM13-202ENST00000378182 SH3BP1Q9Y3L3 701 aa15.03■□□□□ -0
TRIM13-202ENST00000378182 PCDHB6Q9Y5E3 794 aa15.03■□□□□ -0
TRIM13-202ENST00000378182 SNAP23O00161 211 aa15.03■□□□□ -0
TRIM13-202ENST00000378182 MMP1P03956 469 aa15.03■□□□□ -0
TRIM13-202ENST00000378182 COBLL1Q53SF7 1204 aa15.03■□□□□ -0
TRIM13-202ENST00000378182 MAGEF1Q9HAY2 307 aa15.03■□□□□ -0
TRIM13-202ENST00000378182 SPON1Q9HCB6 807 aa15.03■□□□□ -0
TRIM13-202ENST00000378182 PIH1D3Q9NQM4 214 aaKnown RBP15.03■□□□□ -0
TRIM13-202ENST00000378182 TRAF3IP3Q9Y228 551 aa15.03■□□□□ -0
TRIM13-202ENST00000378182 CFAP74Q9C0B2 1584 aa15.03■□□□□ -0
TRIM13-202ENST00000378182 ATP9BO43861 1147 aa15.03■□□□□ -0
TRIM13-202ENST00000378182 MGAT5BQ3V5L5 792 aa15.03■□□□□ -0
TRIM13-202ENST00000378182 ZMYM1Q5SVZ6 1142 aa15.03■□□□□ -0
TRIM13-202ENST00000378182 FOXP4Q8IVH2 680 aaPredicted RBP15.03■□□□□ -0
TRIM13-202ENST00000378182 CCDC90BQ9GZT6 254 aa15.03■□□□□ -0
TRIM13-202ENST00000378182 DHX35Q9H5Z1 703 aaKnown RBP15.03■□□□□ -0
TRIM13-202ENST00000378182 PDE11AQ9HCR9 933 aa15.03■□□□□ -0
TRIM13-202ENST00000378182 ENTPD7Q9NQZ7 604 aa15.03■□□□□ -0
TRIM13-202ENST00000378182 KDM5DQ9BY66 1539 aa15.03■□□□□ -0
TRIM13-202ENST00000378182 FKBP3Q00688 224 aaKnown RBP15.03■□□□□ -0
TRIM13-202ENST00000378182 CUEDC2Q9H467 287 aa15.03■□□□□ -0
TRIM13-202ENST00000378182 CELF2O95319 508 aaKnown RBP15.02■□□□□ -0
TRIM13-202ENST00000378182 IL31Q6EBC2 164 aa15.02■□□□□ -0
TRIM13-202ENST00000378182 ARMC6Q6NXE6 501 aa15.02■□□□□ -0
TRIM13-202ENST00000378182 CRLF3Q8IUI8 442 aa15.02■□□□□ -0
TRIM13-202ENST00000378182 AIPL1Q9NZN9 384 aa15.02■□□□□ -0
TRIM13-202ENST00000378182 DR1Q01658 176 aa15.02■□□□□ -0
TRIM13-202ENST00000378182 SLC44A5Q8NCS7 719 aa15.02■□□□□ -0
TRIM13-202ENST00000378182 MRPL4Q9BYD3 311 aaKnown RBP15.02■□□□□ -0
TRIM13-202ENST00000378182 BSDC1Q9NW68 430 aaPredicted RBP15.02■□□□□ -0
TRIM13-202ENST00000378182 POTEMA6NI47 508 aa15.02■□□□□ -0
TRIM13-202ENST00000378182 LRRC53A6NM62 1247 aa15.02■□□□□ -0
TRIM13-202ENST00000378182 CAPZA2P47755 286 aa15.02■□□□□ -0
TRIM13-202ENST00000378182 NSUN6Q8TEA1 469 aaKnown RBP15.02■□□□□ -0
TRIM13-202ENST00000378182 FAM167AQ96KS9 214 aa15.02■□□□□ -0
TRIM13-202ENST00000378182 AIFM3Q96NN9 605 aa15.02■□□□□ -0
TRIM13-202ENST00000378182 CACNA2D2Q9NY47 1150 aa15.02■□□□□ -0
TRIM13-202ENST00000378182 EPB42P16452 691 aa15.02□□□□□ -0.01
TRIM13-202ENST00000378182 CCT5P48643 541 aa15.02□□□□□ -0.01
TRIM13-202ENST00000378182 SULT1E1P49888 294 aa15.02□□□□□ -0.01
TRIM13-202ENST00000378182 TOGARAM2Q6ZUX3 1019 aa15.02□□□□□ -0.01
TRIM13-202ENST00000378182 LMBRD1Q9NUN5 540 aa15.02□□□□□ -0.01
TRIM13-202ENST00000378182 SEL1LQ9UBV2 794 aa15.02□□□□□ -0.01
TRIM13-202ENST00000378182 PGRMC1O00264 195 aaKnown RBP15.02□□□□□ -0.01
TRIM13-202ENST00000378182 MYO1DO94832 1006 aa15.02□□□□□ -0.01
TRIM13-202ENST00000378182 COPS2P61201 443 aa15.02□□□□□ -0.01
TRIM13-202ENST00000378182 RAD51Q06609 339 aa15.02□□□□□ -0.01
TRIM13-202ENST00000378182 DACH2Q96NX9 599 aa15.02□□□□□ -0.01
TRIM13-202ENST00000378182 UNC45AQ9H3U1 944 aa15.02□□□□□ -0.01
TRIM13-202ENST00000378182 JRKLQ9Y4A0 524 aa15.02□□□□□ -0.01
TRIM13-202ENST00000378182 IKBKBO14920 756 aa15.02□□□□□ -0.01
TRIM13-202ENST00000378182 GNA15P30679 374 aa15.02□□□□□ -0.01
TRIM13-202ENST00000378182 ESRRGP62508 458 aa15.02□□□□□ -0.01
TRIM13-202ENST00000378182 RBM6P78332 1123 aaKnown RBP15.02□□□□□ -0.01
TRIM13-202ENST00000378182 MEI1Q5TIA1 1274 aa15.02□□□□□ -0.01
TRIM13-202ENST00000378182 CCDC197Q8NCU1 140 aa15.02□□□□□ -0.01
TRIM13-202ENST00000378182 ABTB1Q969K4 478 aaPredicted RBP15.02□□□□□ -0.01
TRIM13-202ENST00000378182 NPHP4O75161 1426 aaPredicted RBP15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms