RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 INPP5FQ9Y2H2 1132 aa8.8□□□□□ -1
CKAP2-203ENST00000378037 PCDHA10Q9Y5I2 948 aa8.8□□□□□ -1
CKAP2-203ENST00000378037 PDS5AQ29RF7 1337 aaKnown RBP8.8□□□□□ -1
CKAP2-203ENST00000378037 ANKRD31Q8N7Z5 1873 aa8.8□□□□□ -1
CKAP2-203ENST00000378037 RCCD1A6NED2 376 aa8.8□□□□□ -1
CKAP2-203ENST00000378037 GOLGA6L9A6NEM1 432 aa8.8□□□□□ -1
CKAP2-203ENST00000378037 SLCO1A2P46721 670 aa8.8□□□□□ -1
CKAP2-203ENST00000378037 SARSP49591 514 aaKnown RBP8.8□□□□□ -1
CKAP2-203ENST00000378037 MAP3K9P80192 1104 aa8.8□□□□□ -1
CKAP2-203ENST00000378037 RPS6KA1Q15418 735 aa8.8□□□□□ -1
CKAP2-203ENST00000378037 GUF1Q8N442 669 aaKnown RBP8.8□□□□□ -1
CKAP2-203ENST00000378037 C11orf70Q9BRQ4 267 aa8.8□□□□□ -1
CKAP2-203ENST00000378037 DDX47Q9H0S4 455 aaKnown RBP8.8□□□□□ -1
CKAP2-203ENST00000378037 GPRC5DQ9NZD1 345 aa8.8□□□□□ -1
CKAP2-203ENST00000378037 KLK14Q9P0G3 267 aa8.8□□□□□ -1
CKAP2-203ENST00000378037 PCDHB4Q9Y5E5 795 aa8.8□□□□□ -1
CKAP2-203ENST00000378037 SNED1Q8TER0 1413 aa8.8□□□□□ -1
CKAP2-203ENST00000378037 WDR46O15213 610 aaKnown RBP8.79□□□□□ -1
CKAP2-203ENST00000378037 CTNND1O60716 968 aaKnown RBP8.79□□□□□ -1
CKAP2-203ENST00000378037 ICAM1P05362 532 aa8.79□□□□□ -1
CKAP2-203ENST00000378037 TMEM191BP0C7N4 346 aa8.79□□□□□ -1
CKAP2-203ENST00000378037 ZNF157P51786 506 aaPredicted RBP8.79□□□□□ -1
CKAP2-203ENST00000378037 ACTR2P61160 394 aa8.79□□□□□ -1
CKAP2-203ENST00000378037 DDX42Q86XP3 938 aaKnown RBP eCLIP8.79□□□□□ -1
CKAP2-203ENST00000378037 CPA5Q8WXQ8 436 aa8.79□□□□□ -1
CKAP2-203ENST00000378037 FAM20AQ96MK3 541 aa8.79□□□□□ -1
CKAP2-203ENST00000378037 MTMR9Q96QG7 549 aa8.79□□□□□ -1
CKAP2-203ENST00000378037 ZNF302Q9NR11 478 aa8.79□□□□□ -1
CKAP2-203ENST00000378037 PARP2Q9UGN5 583 aa8.79□□□□□ -1
CKAP2-203ENST00000378037 SMCHD1A6NHR9 2005 aa8.79□□□□□ -1
CKAP2-203ENST00000378037 H2AFZP0C0S5 128 aa8.79□□□□□ -1
CKAP2-203ENST00000378037 ZNF18P17022 549 aa8.79□□□□□ -1
CKAP2-203ENST00000378037 KLRC1P26715 233 aa8.79□□□□□ -1
CKAP2-203ENST00000378037 PTK2Q05397 1052 aa8.79□□□□□ -1
CKAP2-203ENST00000378037 ITGB3BPQ13352 177 aaPredicted RBP8.79□□□□□ -1
CKAP2-203ENST00000378037 H2AFVQ71UI9 128 aa8.79□□□□□ -1
CKAP2-203ENST00000378037 OTOP1Q7RTM1 612 aa8.79□□□□□ -1
CKAP2-203ENST00000378037 ARMC9Q7Z3E5 817 aa8.79□□□□□ -1
CKAP2-203ENST00000378037 ZNF354CQ86Y25 554 aa8.79□□□□□ -1
CKAP2-203ENST00000378037 CCDC60Q8IWA6 550 aaPredicted RBP8.79□□□□□ -1
CKAP2-203ENST00000378037 ZNF710Q8N1W2 664 aa8.79□□□□□ -1
CKAP2-203ENST00000378037 CEP120Q8N960 986 aa8.79□□□□□ -1
CKAP2-203ENST00000378037 IL17RAQ96F46 866 aa8.79□□□□□ -1
CKAP2-203ENST00000378037 THAP9Q9H5L6 903 aa8.79□□□□□ -1
CKAP2-203ENST00000378037 ARAP2Q8WZ64 1704 aa8.79□□□□□ -1
CKAP2-203ENST00000378037 PI4K2BG5E9Z4 385 aa8.79□□□□□ -1
CKAP2-203ENST00000378037 TCF7P36402 384 aaPredicted RBP8.79□□□□□ -1
CKAP2-203ENST00000378037 SREBF1P36956 1147 aa8.79□□□□□ -1
CKAP2-203ENST00000378037 STAT5BP51692 787 aa8.79□□□□□ -1
CKAP2-203ENST00000378037 KIZQ2M2Z5 673 aa8.79□□□□□ -1
CKAP2-203ENST00000378037 ARSHQ5FYA8 562 aa8.79□□□□□ -1
CKAP2-203ENST00000378037 TSPYL1Q9H0U9 437 aa8.79□□□□□ -1
CKAP2-203ENST00000378037 OSGEPQ9NPF4 335 aa8.79□□□□□ -1
CKAP2-203ENST00000378037 HES2Q9Y543 173 aa8.79□□□□□ -1
CKAP2-203ENST00000378037 THAP12O43422 761 aa8.78□□□□□ -1
CKAP2-203ENST00000378037 EYA4O95677 639 aa8.78□□□□□ -1
CKAP2-203ENST00000378037 FGRP09769 529 aa8.78□□□□□ -1
CKAP2-203ENST00000378037 UCHL3P15374 230 aa8.78□□□□□ -1
CKAP2-203ENST00000378037 KCNA3P22001 575 aa8.78□□□□□ -1
CKAP2-203ENST00000378037 CYP2C19P33261 490 aa8.78□□□□□ -1
CKAP2-203ENST00000378037 YARSP54577 528 aaKnown RBP8.78□□□□□ -1
CKAP2-203ENST00000378037 DRP2Q13474 957 aa8.78□□□□□ -1
CKAP2-203ENST00000378037 UAP1Q16222 522 aaPredicted RBP8.78□□□□□ -1
CKAP2-203ENST00000378037 REXO1L1PQ8IX06 675 aa8.78□□□□□ -1
CKAP2-203ENST00000378037 MMP19Q99542 508 aa8.78□□□□□ -1
CKAP2-203ENST00000378037 C7orf25Q9BPX7 421 aa8.78□□□□□ -1
CKAP2-203ENST00000378037 KRIT1O00522 736 aa8.78□□□□□ -1
CKAP2-203ENST00000378037 CLDN3O15551 220 aa8.78□□□□□ -1
CKAP2-203ENST00000378037 ERLIN2O94905 339 aa8.78□□□□□ -1
CKAP2-203ENST00000378037 SPATA31C1P0DKV0 1188 aa8.78□□□□□ -1
CKAP2-203ENST00000378037 CDC25BP30305 580 aa8.78□□□□□ -1
CKAP2-203ENST00000378037 PPP1R7Q15435 360 aa8.78□□□□□ -1
CKAP2-203ENST00000378037 LONRF2Q1L5Z9 754 aa8.78□□□□□ -1
CKAP2-203ENST00000378037 APOBEC3FQ8IUX4 373 aaKnown RBP8.78□□□□□ -1
CKAP2-203ENST00000378037 KRT222Q8N1A0 295 aa8.78□□□□□ -1
CKAP2-203ENST00000378037 MGARPQ8TDB4 240 aa8.78□□□□□ -1
CKAP2-203ENST00000378037 SLC20A1Q8WUM9 679 aa8.78□□□□□ -1
CKAP2-203ENST00000378037 LRRN4Q8WUT4 740 aa8.78□□□□□ -1
CKAP2-203ENST00000378037 NAP1L4Q99733 375 aaKnown RBP8.78□□□□□ -1
CKAP2-203ENST00000378037 PORCNQ9H237 461 aa8.78□□□□□ -1
CKAP2-203ENST00000378037 EPB41L5Q9HCM4 733 aa8.78□□□□□ -1
CKAP2-203ENST00000378037 C1orf112Q9NSG2 853 aa8.78□□□□□ -1
CKAP2-203ENST00000378037 ARHGAP20Q9P2F6 1191 aa8.78□□□□□ -1
CKAP2-203ENST00000378037 FBXO40Q9UH90 709 aa8.78□□□□□ -1
CKAP2-203ENST00000378037 PSAPP07602 524 aa8.78□□□□□ -1
CKAP2-203ENST00000378037 C6orf222P0C671 652 aaPredicted RBP8.78□□□□□ -1
CKAP2-203ENST00000378037 OAS2P29728 719 aaKnown RBP8.78□□□□□ -1
CKAP2-203ENST00000378037 PRPHP41219 470 aa8.78□□□□□ -1
CKAP2-203ENST00000378037 FXR2P51116 673 aaKnown RBP eCLIP8.78□□□□□ -1
CKAP2-203ENST00000378037 MRPS9P82933 396 aaKnown RBP8.78□□□□□ -1
CKAP2-203ENST00000378037 HTRA3P83110 453 aa8.78□□□□□ -1
CKAP2-203ENST00000378037 PDIA5Q14554 519 aa8.78□□□□□ -1
CKAP2-203ENST00000378037 PGM5Q15124 567 aa8.78□□□□□ -1
CKAP2-203ENST00000378037 CBWD6Q4V339 395 aa8.78□□□□□ -1
CKAP2-203ENST00000378037 CBWD3Q5JTY5 395 aa8.78□□□□□ -1
CKAP2-203ENST00000378037 CBWD5Q5RIA9 395 aa8.78□□□□□ -1
CKAP2-203ENST00000378037 FAM117BQ6P1L5 589 aa8.78□□□□□ -1
CKAP2-203ENST00000378037 CCDC105Q8IYK2 499 aa8.78□□□□□ -1
CKAP2-203ENST00000378037 XXYLT1Q8NBI6 393 aa8.78□□□□□ -1
CKAP2-203ENST00000378037 ASCC2Q9H1I8 757 aaPredicted RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms