RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 ZNF148Q9UQR1 794 aa5.28□□□□□ -1.56
PCDH9-201ENST00000377861 CSDE1O75534 798 aaKnown RBP5.28□□□□□ -1.56
PCDH9-201ENST00000377861 LSP1P33241 339 aa5.28□□□□□ -1.56
PCDH9-201ENST00000377861 ICA1Q05084 483 aa5.28□□□□□ -1.56
PCDH9-201ENST00000377861 ITGA9Q13797 1035 aa5.28□□□□□ -1.56
PCDH9-201ENST00000377861 DUOXA2Q1HG44 320 aa5.28□□□□□ -1.56
PCDH9-201ENST00000377861 SLC4A8Q2Y0W8 1093 aa5.28□□□□□ -1.56
PCDH9-201ENST00000377861 RHOT1Q8IXI2 618 aa5.28□□□□□ -1.56
PCDH9-201ENST00000377861 SPIRE2Q8WWL2 714 aa5.28□□□□□ -1.56
PCDH9-201ENST00000377861 PCYOX1Q9UHG3 505 aa5.28□□□□□ -1.56
PCDH9-201ENST00000377861 SRGAP2BP0DMP2 458 aa5.28□□□□□ -1.56
PCDH9-201ENST00000377861 GNAT1P11488 350 aa5.28□□□□□ -1.56
PCDH9-201ENST00000377861 QARSP47897 775 aaKnown RBP5.28□□□□□ -1.56
PCDH9-201ENST00000377861 IFT88Q13099 833 aa5.28□□□□□ -1.56
PCDH9-201ENST00000377861 ANO5Q75V66 913 aa5.28□□□□□ -1.56
PCDH9-201ENST00000377861 PYCARDQ9ULZ3 195 aa5.28□□□□□ -1.56
PCDH9-201ENST00000377861 SPATA31A3Q5VYP0 1347 aa5.28□□□□□ -1.56
PCDH9-201ENST00000377861 AREL1O15033 823 aa5.28□□□□□ -1.56
PCDH9-201ENST00000377861 RASA1P20936 1047 aa5.28□□□□□ -1.56
PCDH9-201ENST00000377861 CLNS1AP54105 237 aaKnown RBP5.28□□□□□ -1.56
PCDH9-201ENST00000377861 KCNQ5Q9NR82 932 aa5.28□□□□□ -1.56
PCDH9-201ENST00000377861 PRDM2Q13029 1718 aa5.28□□□□□ -1.56
PCDH9-201ENST00000377861 EPHA7Q15375 998 aa5.28□□□□□ -1.56
PCDH9-201ENST00000377861 SLC45A4Q5BKX6 768 aa5.28□□□□□ -1.56
PCDH9-201ENST00000377861 NRDE2Q9H7Z3 1164 aa5.28□□□□□ -1.56
PCDH9-201ENST00000377861 APEX2Q9UBZ4 518 aa5.28□□□□□ -1.56
PCDH9-201ENST00000377861 PPP2R5DQ14738 602 aa5.28□□□□□ -1.56
PCDH9-201ENST00000377861 MUM1Q2TAK8 710 aa5.28□□□□□ -1.56
PCDH9-201ENST00000377861 FAM186BQ8IYM0 893 aa5.28□□□□□ -1.56
PCDH9-201ENST00000377861 DNAJC17Q9NVM6 304 aaKnown RBP5.28□□□□□ -1.56
PCDH9-201ENST00000377861 DNAAF2Q9NVR5 837 aaKnown RBP5.28□□□□□ -1.56
PCDH9-201ENST00000377861 CDC42BPGQ6DT37 1551 aa5.28□□□□□ -1.56
PCDH9-201ENST00000377861 GSG1L2A8MUP6 293 aa5.28□□□□□ -1.56
PCDH9-201ENST00000377861 CYP3A4P08684 503 aa5.28□□□□□ -1.56
PCDH9-201ENST00000377861 EML4Q9HC35 981 aaKnown RBP5.28□□□□□ -1.56
PCDH9-201ENST00000377861 PPIL2Q13356 520 aa5.28□□□□□ -1.56
PCDH9-201ENST00000377861 KIAA1755Q5JYT7 1200 aa5.28□□□□□ -1.56
PCDH9-201ENST00000377861 UBLCP1Q8WVY7 318 aaPredicted RBP5.28□□□□□ -1.56
PCDH9-201ENST00000377861 JAK2O60674 1132 aa5.28□□□□□ -1.56
PCDH9-201ENST00000377861 TRMT5Q32P41 509 aaKnown RBP5.28□□□□□ -1.56
PCDH9-201ENST00000377861 SLCO2A1Q92959 643 aa5.28□□□□□ -1.56
PCDH9-201ENST00000377861 FBXW7Q969H0 707 aa5.28□□□□□ -1.56
PCDH9-201ENST00000377861 GMCL1Q96IK5 515 aa5.28□□□□□ -1.56
PCDH9-201ENST00000377861 STARD13Q9Y3M8 1113 aa5.28□□□□□ -1.56
PCDH9-201ENST00000377861 C19orf81C9J6K1 198 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 CSNK2BP67870 215 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 SGSM1Q2NKQ1 1148 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 RELL1Q8IUW5 271 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 SP8Q8IXZ3 490 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 ZNF34Q8IZ26 560 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 TLR7Q9NYK1 1049 aaKnown RBP5.27□□□□□ -1.57
PCDH9-201ENST00000377861 ABHD2P08910 425 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 SHC4Q6S5L8 630 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 GCNT1Q02742 428 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 GRM4Q14833 912 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 GMCL1P1Q8NEA9 526 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 AGTPBP1Q9UPW5 1226 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 PCDHGC5Q9Y5F6 944 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 KIAA1210Q9ULL0 1709 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 F9P00740 461 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 CIITAP33076 1130 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 EPM2AIP1Q7L775 607 aaPredicted RBP5.27□□□□□ -1.57
PCDH9-201ENST00000377861 SEPT11Q9NVA2 429 aaKnown RBP5.27□□□□□ -1.57
PCDH9-201ENST00000377861 DBR1Q9UK59 544 aaKnown RBP5.27□□□□□ -1.57
PCDH9-201ENST00000377861 TRAFD1O14545 582 aaPredicted RBP5.27□□□□□ -1.57
PCDH9-201ENST00000377861 HEXIM1O94992 359 aaKnown RBP5.27□□□□□ -1.57
PCDH9-201ENST00000377861 MSH2P43246 934 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 CNOT6LQ96LI5 555 aaKnown RBP5.27□□□□□ -1.57
PCDH9-201ENST00000377861 ZBTB3Q9H5J0 574 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 ARHGAP26Q9UNA1 814 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 HTR7P34969 479 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 SNX17Q15036 470 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 SGO2Q562F6 1265 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 ATP11CQ8NB49 1132 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 PYROXD1Q8WU10 500 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 LYPLA2O95372 231 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 PLEKHA5Q9HAU0 1116 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 AVENQ9NQS1 362 aaPredicted RBP5.27□□□□□ -1.57
PCDH9-201ENST00000377861 EFCAB6Q5THR3 1501 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 PPP1R3GB7ZBB8 358 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 INHBAP08476 426 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 CCDC130P13994 396 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 PRCPP42785 496 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 HAND2P61296 217 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 CCNA1P78396 465 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 PDE4CQ08493 712 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 CERKLQ49MI3 558 aaPredicted RBP5.27□□□□□ -1.57
PCDH9-201ENST00000377861 DRICH1Q6PGQ1 229 aaPredicted RBP5.27□□□□□ -1.57
PCDH9-201ENST00000377861 FAM53CQ9NYF3 392 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 KLC1Q07866 573 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 ACAP3Q96P50 834 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 ADAMTS1Q9UHI8 967 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 GTF3C4Q9UKN8 822 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 WDR64B1ANS9 1081 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 TTC27Q6P3X3 843 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 SCFD1Q8WVM8 642 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 CYP3A43Q9HB55 503 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 METP08581 1390 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 NPTXRO95502 500 aa5.27□□□□□ -1.57
PCDH9-201ENST00000377861 BBS5Q8N3I7 341 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms