RNA–Protein interactions for RNA: ENST00000377843.6

CSNK1A1-202, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-202ENST00000377843 ATL2Q8NHH9 583 aa16.9■□□□□ 0.3
CSNK1A1-202ENST00000377843 ARHGEF2Q92974 986 aaKnown RBP16.9■□□□□ 0.3
CSNK1A1-202ENST00000377843 HAO1Q9UJM8 370 aa16.9■□□□□ 0.3
CSNK1A1-202ENST00000377843 PCDHA3Q9Y5H8 950 aa16.9■□□□□ 0.3
CSNK1A1-202ENST00000377843 E7ENQ6 273 aa16.9■□□□□ 0.3
CSNK1A1-202ENST00000377843 KCNQ2O43526 872 aa16.9■□□□□ 0.3
CSNK1A1-202ENST00000377843 GNAQP50148 359 aa16.9■□□□□ 0.3
CSNK1A1-202ENST00000377843 CUL3Q13618 768 aa16.9■□□□□ 0.3
CSNK1A1-202ENST00000377843 PARP6Q2NL67 630 aa16.9■□□□□ 0.3
CSNK1A1-202ENST00000377843 RNF43Q68DV7 783 aa16.9■□□□□ 0.3
CSNK1A1-202ENST00000377843 KIF6Q6ZMV9 814 aa16.9■□□□□ 0.3
CSNK1A1-202ENST00000377843 TAOK1Q7L7X3 1001 aa16.9■□□□□ 0.3
CSNK1A1-202ENST00000377843 ZDHHC14Q8IZN3 488 aa16.9■□□□□ 0.3
CSNK1A1-202ENST00000377843 OLIG1Q8TAK6 271 aa16.9■□□□□ 0.3
CSNK1A1-202ENST00000377843 FAM81AQ8TBF8 368 aa16.9■□□□□ 0.3
CSNK1A1-202ENST00000377843 ZNF384Q8TF68 577 aa16.9■□□□□ 0.3
CSNK1A1-202ENST00000377843 AMFRQ9UKV5 643 aa16.9■□□□□ 0.3
CSNK1A1-202ENST00000377843 FAM187AA6NFU0 413 aa16.89■□□□□ 0.3
CSNK1A1-202ENST00000377843 SIGLEC16A6NMB1 481 aa16.89■□□□□ 0.3
CSNK1A1-202ENST00000377843 H2AFZP0C0S5 128 aa16.89■□□□□ 0.3
CSNK1A1-202ENST00000377843 UCHL3P15374 230 aa16.89■□□□□ 0.3
CSNK1A1-202ENST00000377843 KCNH2Q12809 1159 aa16.89■□□□□ 0.3
CSNK1A1-202ENST00000377843 SLC4A8Q2Y0W8 1093 aa16.89■□□□□ 0.3
CSNK1A1-202ENST00000377843 TTC27Q6P3X3 843 aa16.89■□□□□ 0.3
CSNK1A1-202ENST00000377843 SEPT14Q6ZU15 432 aa16.89■□□□□ 0.3
CSNK1A1-202ENST00000377843 H2AFVQ71UI9 128 aa16.89■□□□□ 0.3
CSNK1A1-202ENST00000377843 PTF1AQ7RTS3 328 aa16.89■□□□□ 0.3
CSNK1A1-202ENST00000377843 ALG3Q92685 438 aa16.89■□□□□ 0.3
CSNK1A1-202ENST00000377843 TGS1Q96RS0 853 aaKnown RBP16.89■□□□□ 0.3
CSNK1A1-202ENST00000377843 CPVLQ9H3G5 476 aa16.89■□□□□ 0.3
CSNK1A1-202ENST00000377843 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.89■□□□□ 0.3
CSNK1A1-202ENST00000377843 TRMT112Q9UI30 125 aaKnown RBP16.89■□□□□ 0.3
CSNK1A1-202ENST00000377843 MTMR7Q9Y216 660 aa16.89■□□□□ 0.3
CSNK1A1-202ENST00000377843 PLCG2P16885 1265 aa16.89■□□□□ 0.29
CSNK1A1-202ENST00000377843 EPHB2P29323 1055 aa16.89■□□□□ 0.29
CSNK1A1-202ENST00000377843 COASYQ13057 564 aa16.89■□□□□ 0.29
CSNK1A1-202ENST00000377843 SH3RF3Q8TEJ3 882 aaPredicted RBP16.89■□□□□ 0.29
CSNK1A1-202ENST00000377843 ZNF526Q8TF50 670 aaPredicted RBP16.89■□□□□ 0.29
CSNK1A1-202ENST00000377843 BRIP1Q9BX63 1249 aa16.89■□□□□ 0.29
CSNK1A1-202ENST00000377843 KCNK9Q9NPC2 374 aa16.89■□□□□ 0.29
CSNK1A1-202ENST00000377843 NMRK1Q9NWW6 199 aa16.89■□□□□ 0.29
CSNK1A1-202ENST00000377843 CICQ96RK0 1608 aaPredicted RBP16.89■□□□□ 0.29
CSNK1A1-202ENST00000377843 POTEMA6NI47 508 aa16.88■□□□□ 0.29
CSNK1A1-202ENST00000377843 GALCP54803 685 aa16.88■□□□□ 0.29
CSNK1A1-202ENST00000377843 DRG2P55039 364 aaKnown RBP16.88■□□□□ 0.29
CSNK1A1-202ENST00000377843 TNIP1Q15025 636 aa16.88■□□□□ 0.29
CSNK1A1-202ENST00000377843 ECM1Q16610 540 aa16.88■□□□□ 0.29
CSNK1A1-202ENST00000377843 GJB7Q6PEY0 223 aa16.88■□□□□ 0.29
CSNK1A1-202ENST00000377843 KLHL23Q8NBE8 558 aa16.88■□□□□ 0.29
CSNK1A1-202ENST00000377843 U2AF1L4Q8WU68 220 aaKnown RBP16.88■□□□□ 0.29
CSNK1A1-202ENST00000377843 RAD54LQ92698 747 aa16.88■□□□□ 0.29
CSNK1A1-202ENST00000377843 SLC7A6OSQ96CW6 309 aaPredicted RBP16.88■□□□□ 0.29
CSNK1A1-202ENST00000377843 ERP27Q96DN0 273 aa16.88■□□□□ 0.29
CSNK1A1-202ENST00000377843 ZNF333Q96JL9 665 aa16.88■□□□□ 0.29
CSNK1A1-202ENST00000377843 DENND2DQ9H6A0 471 aaPredicted RBP16.88■□□□□ 0.29
CSNK1A1-202ENST00000377843 BARHL2Q9NY43 387 aa16.88■□□□□ 0.29
CSNK1A1-202ENST00000377843 TMOD4Q9NZQ9 345 aa16.88■□□□□ 0.29
CSNK1A1-202ENST00000377843 KLHL14Q9P2G3 628 aa16.88■□□□□ 0.29
CSNK1A1-202ENST00000377843 TOGARAM1Q9Y4F4 1720 aa16.88■□□□□ 0.29
CSNK1A1-202ENST00000377843 WTIPA6NIX2 430 aaPredicted RBP16.88■□□□□ 0.29
CSNK1A1-202ENST00000377843 BAG3O95817 575 aa16.88■□□□□ 0.29
CSNK1A1-202ENST00000377843 T-ENOLP0DO92 83 aa16.88■□□□□ 0.29
CSNK1A1-202ENST00000377843 KRT13P13646 458 aa16.88■□□□□ 0.29
CSNK1A1-202ENST00000377843 FOXN2P32314 431 aa16.88■□□□□ 0.29
CSNK1A1-202ENST00000377843 PDIA5Q14554 519 aa16.88■□□□□ 0.29
CSNK1A1-202ENST00000377843 APLFQ8IW19 511 aaPredicted RBP16.88■□□□□ 0.29
CSNK1A1-202ENST00000377843 DNAJC19Q96DA6 116 aa16.88■□□□□ 0.29
CSNK1A1-202ENST00000377843 TBC1D10AQ9BXI6 508 aa16.88■□□□□ 0.29
CSNK1A1-202ENST00000377843 KIAA1683Q9H0B3 1180 aa16.88■□□□□ 0.29
CSNK1A1-202ENST00000377843 MAD2L2Q9UI95 211 aa16.88■□□□□ 0.29
CSNK1A1-202ENST00000377843 CHKBQ9Y259 395 aa16.88■□□□□ 0.29
CSNK1A1-202ENST00000377843 CCDC88AQ3V6T2 1871 aa16.88■□□□□ 0.29
CSNK1A1-202ENST00000377843 ARAP2Q8WZ64 1704 aa16.88■□□□□ 0.29
CSNK1A1-202ENST00000377843 A0A0A6YYK5 440 aaPredicted RBP16.87■□□□□ 0.29
CSNK1A1-202ENST00000377843 ZC2HC1CQ53FD0 456 aaPredicted RBP16.87■□□□□ 0.29
CSNK1A1-202ENST00000377843 FAM47EQ6ZV65 393 aa16.87■□□□□ 0.29
CSNK1A1-202ENST00000377843 APBB1IPQ7Z5R6 666 aaPredicted RBP16.87■□□□□ 0.29
CSNK1A1-202ENST00000377843 SYCE1Q8N0S2 351 aa16.87■□□□□ 0.29
CSNK1A1-202ENST00000377843 SLC35G2Q8TBE7 412 aa16.87■□□□□ 0.29
CSNK1A1-202ENST00000377843 STMN4Q9H169 189 aaPredicted RBP16.87■□□□□ 0.29
CSNK1A1-202ENST00000377843 COL14A1Q05707 1796 aaKnown RBP16.87■□□□□ 0.29
CSNK1A1-202ENST00000377843 PDE8AO60658 829 aa16.87■□□□□ 0.29
CSNK1A1-202ENST00000377843 MARSP56192 900 aaKnown RBP16.87■□□□□ 0.29
CSNK1A1-202ENST00000377843 ADCY1Q08828 1119 aa16.87■□□□□ 0.29
CSNK1A1-202ENST00000377843 CCDC15Q0P6D6 951 aa16.87■□□□□ 0.29
CSNK1A1-202ENST00000377843 DHX34Q14147 1143 aaKnown RBP16.87■□□□□ 0.29
CSNK1A1-202ENST00000377843 CCDC25Q86WR0 208 aa16.87■□□□□ 0.29
CSNK1A1-202ENST00000377843 CCNJLQ8IV13 435 aa16.87■□□□□ 0.29
CSNK1A1-202ENST00000377843 PRELID2Q8N945 189 aa16.87■□□□□ 0.29
CSNK1A1-202ENST00000377843 LNX1Q8TBB1 728 aaPredicted RBP16.87■□□□□ 0.29
CSNK1A1-202ENST00000377843 FGD4Q96M96 766 aa16.87■□□□□ 0.29
CSNK1A1-202ENST00000377843 LBHD1Q9BQE6 289 aaPredicted RBP16.87■□□□□ 0.29
CSNK1A1-202ENST00000377843 TMX4Q9H1E5 349 aaPredicted RBP16.87■□□□□ 0.29
CSNK1A1-202ENST00000377843 IL17RBQ9NRM6 502 aa16.87■□□□□ 0.29
CSNK1A1-202ENST00000377843 TXLNGQ9NUQ3 528 aa16.87■□□□□ 0.29
CSNK1A1-202ENST00000377843 STK17AQ9UEE5 414 aa16.87■□□□□ 0.29
CSNK1A1-202ENST00000377843 ARMCX3Q9UH62 379 aaPredicted RBP16.87■□□□□ 0.29
CSNK1A1-202ENST00000377843 UBR2Q8IWV8 1755 aa16.87■□□□□ 0.29
CSNK1A1-202ENST00000377843 RREB1Q92766 1687 aa16.87■□□□□ 0.29
CSNK1A1-202ENST00000377843 IGHMBP2P38935 993 aaKnown RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms