RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 TMEM161AQ9NX61 479 aa12.89□□□□□ -0.35
SMARCE1-203ENST00000377808 DACT1Q9NYF0 836 aa12.89□□□□□ -0.35
SMARCE1-203ENST00000377808 LMCD1Q9NZU5 365 aa12.89□□□□□ -0.35
SMARCE1-203ENST00000377808 PCDHB6Q9Y5E3 794 aa12.89□□□□□ -0.35
SMARCE1-203ENST00000377808 PRRC2BQ5JSZ5 2229 aaKnown RBP12.89□□□□□ -0.35
SMARCE1-203ENST00000377808 MED24O75448 989 aa12.88□□□□□ -0.35
SMARCE1-203ENST00000377808 DGAT1O75907 488 aa12.88□□□□□ -0.35
SMARCE1-203ENST00000377808 LYPLA2O95372 231 aa12.88□□□□□ -0.35
SMARCE1-203ENST00000377808 RB1P06400 928 aa12.88□□□□□ -0.35
SMARCE1-203ENST00000377808 RARRES1P49788 294 aa12.88□□□□□ -0.35
SMARCE1-203ENST00000377808 MRPS5P82675 430 aaKnown RBP12.88□□□□□ -0.35
SMARCE1-203ENST00000377808 PTGDRQ13258 359 aa12.88□□□□□ -0.35
SMARCE1-203ENST00000377808 LONRF3Q496Y0 759 aa12.88□□□□□ -0.35
SMARCE1-203ENST00000377808 TIGD5Q53EQ6 642 aa12.88□□□□□ -0.35
SMARCE1-203ENST00000377808 TJAP1Q5JTD0 557 aa12.88□□□□□ -0.35
SMARCE1-203ENST00000377808 LARP1BQ659C4 914 aaKnown RBP12.88□□□□□ -0.35
SMARCE1-203ENST00000377808 POTEGQ6S5H5 508 aa12.88□□□□□ -0.35
SMARCE1-203ENST00000377808 FAM43BQ6ZT52 329 aaPredicted RBP12.88□□□□□ -0.35
SMARCE1-203ENST00000377808 FERMT3Q86UX7 667 aa12.88□□□□□ -0.35
SMARCE1-203ENST00000377808 CATSPER3Q86XQ3 398 aa12.88□□□□□ -0.35
SMARCE1-203ENST00000377808 RNF149Q8NC42 400 aa12.88□□□□□ -0.35
SMARCE1-203ENST00000377808 ATXN2LQ8WWM7 1075 aaKnown RBP12.88□□□□□ -0.35
SMARCE1-203ENST00000377808 CLP1Q92989 425 aaKnown RBP12.88□□□□□ -0.35
SMARCE1-203ENST00000377808 MRPL38Q96DV4 380 aaKnown RBP12.88□□□□□ -0.35
SMARCE1-203ENST00000377808 TUFT1Q9NNX1 390 aa12.88□□□□□ -0.35
SMARCE1-203ENST00000377808 ALG13Q9NP73 1137 aaKnown RBP12.88□□□□□ -0.35
SMARCE1-203ENST00000377808 ANKEF1Q9NU02 776 aa12.88□□□□□ -0.35
SMARCE1-203ENST00000377808 RALGAPA2Q2PPJ7 1873 aa12.88□□□□□ -0.35
SMARCE1-203ENST00000377808 ARID2Q68CP9 1835 aa12.88□□□□□ -0.35
SMARCE1-203ENST00000377808 GRM6O15303 877 aa12.88□□□□□ -0.35
SMARCE1-203ENST00000377808 HOXA2O43364 376 aa12.88□□□□□ -0.35
SMARCE1-203ENST00000377808 ERLIN2O94905 339 aa12.88□□□□□ -0.35
SMARCE1-203ENST00000377808 CCT6AP40227 531 aaKnown RBP12.88□□□□□ -0.35
SMARCE1-203ENST00000377808 PHKA2P46019 1235 aa12.88□□□□□ -0.35
SMARCE1-203ENST00000377808 TOB1P50616 345 aaPredicted RBP12.88□□□□□ -0.35
SMARCE1-203ENST00000377808 TFF2Q03403 129 aa12.88□□□□□ -0.35
SMARCE1-203ENST00000377808 TFDP1Q14186 410 aa12.88□□□□□ -0.35
SMARCE1-203ENST00000377808 ECHDC2Q86YB7 292 aa12.88□□□□□ -0.35
SMARCE1-203ENST00000377808 CRIPAKQ8N1N5 446 aa12.88□□□□□ -0.35
SMARCE1-203ENST00000377808 HLA-CQ95604 372 aa12.88□□□□□ -0.35
SMARCE1-203ENST00000377808 NACC1Q96RE7 527 aa12.88□□□□□ -0.35
SMARCE1-203ENST00000377808 PLVAPQ9BX97 442 aa12.88□□□□□ -0.35
SMARCE1-203ENST00000377808 COL25A1Q9BXS0 654 aaPredicted RBP12.88□□□□□ -0.35
SMARCE1-203ENST00000377808 RAB34Q9BZG1 259 aa12.88□□□□□ -0.35
SMARCE1-203ENST00000377808 POLR3FQ9H1D9 316 aaPredicted RBP12.88□□□□□ -0.35
SMARCE1-203ENST00000377808 ELAC1Q9H777 363 aaKnown RBP12.88□□□□□ -0.35
SMARCE1-203ENST00000377808 XPNPEP1Q9NQW7 623 aa12.88□□□□□ -0.35
SMARCE1-203ENST00000377808 AAASQ9NRG9 546 aa12.88□□□□□ -0.35
SMARCE1-203ENST00000377808 HCSTQ9UBK5 93 aa12.88□□□□□ -0.35
SMARCE1-203ENST00000377808 LRWD1Q9UFC0 647 aa12.88□□□□□ -0.35
SMARCE1-203ENST00000377808 PCDHB12Q9Y5F1 795 aa12.88□□□□□ -0.35
SMARCE1-203ENST00000377808 VPS37CA5D8V6 355 aaPredicted RBP12.87□□□□□ -0.35
SMARCE1-203ENST00000377808 ARHGEF35A5YM69 484 aa12.87□□□□□ -0.35
SMARCE1-203ENST00000377808 C5orf67F2Z3F1 127 aa12.87□□□□□ -0.35
SMARCE1-203ENST00000377808 ASAP2O43150 1006 aa12.87□□□□□ -0.35
SMARCE1-203ENST00000377808 LINC00271P0C7V0 271 aa12.87□□□□□ -0.35
SMARCE1-203ENST00000377808 SPATA31C1P0DKV0 1188 aa12.87□□□□□ -0.35
SMARCE1-203ENST00000377808 FXR2P51116 673 aaKnown RBP eCLIP12.87□□□□□ -0.358e-8■□□□□ 8.3
SMARCE1-203ENST00000377808 FAM189BP81408 668 aa12.87□□□□□ -0.35
SMARCE1-203ENST00000377808 MXD4Q14582 209 aaPredicted RBP12.87□□□□□ -0.35
SMARCE1-203ENST00000377808 ZRSR1Q15695 479 aaKnown RBP12.87□□□□□ -0.35
SMARCE1-203ENST00000377808 AAK1Q2M2I8 961 aa12.87□□□□□ -0.35
SMARCE1-203ENST00000377808 RILPL1Q5EBL4 403 aa12.87□□□□□ -0.35
SMARCE1-203ENST00000377808 TCEAL5Q5H9L2 206 aa12.87□□□□□ -0.35
SMARCE1-203ENST00000377808 DTHD1Q6ZMT9 781 aa12.87□□□□□ -0.35
SMARCE1-203ENST00000377808 SRGAP1Q7Z6B7 1085 aa12.87□□□□□ -0.35
SMARCE1-203ENST00000377808 THNSL1Q8IYQ7 743 aa12.87□□□□□ -0.35
SMARCE1-203ENST00000377808 KLHL23Q8NBE8 558 aa12.87□□□□□ -0.35
SMARCE1-203ENST00000377808 HELQQ8TDG4 1101 aa12.87□□□□□ -0.35
SMARCE1-203ENST00000377808 ASAP3Q8TDY4 903 aa12.87□□□□□ -0.35
SMARCE1-203ENST00000377808 SNX29Q8TEQ0 813 aa12.87□□□□□ -0.35
SMARCE1-203ENST00000377808 ASB2Q96Q27 587 aa12.87□□□□□ -0.35
SMARCE1-203ENST00000377808 POLR3CQ9BUI4 534 aaPredicted RBP12.87□□□□□ -0.35
SMARCE1-203ENST00000377808 TMEM117Q9H0C3 514 aa12.87□□□□□ -0.35
SMARCE1-203ENST00000377808 NSUN3Q9H649 340 aaKnown RBP12.87□□□□□ -0.35
SMARCE1-203ENST00000377808 IFT122Q9HBG6 1241 aa12.87□□□□□ -0.35
SMARCE1-203ENST00000377808 CHST12Q9NRB3 414 aa12.87□□□□□ -0.35
SMARCE1-203ENST00000377808 FOXD4L1Q9NU39 408 aa12.87□□□□□ -0.35
SMARCE1-203ENST00000377808 TYW1Q9NV66 732 aaKnown RBP12.87□□□□□ -0.35
SMARCE1-203ENST00000377808 COG5Q9UP83 839 aa12.87□□□□□ -0.35
SMARCE1-203ENST00000377808 A0A0U1RQF3 1178 aa12.86□□□□□ -0.35
SMARCE1-203ENST00000377808 INO80B-WBP1J3KQ70 363 aa12.86□□□□□ -0.35
SMARCE1-203ENST00000377808 RPA1P27694 616 aa12.86□□□□□ -0.35
SMARCE1-203ENST00000377808 CAPSQ13938 189 aa12.86□□□□□ -0.35
SMARCE1-203ENST00000377808 KRT79Q5XKE5 535 aa12.86□□□□□ -0.35
SMARCE1-203ENST00000377808 LRRC43Q8N309 656 aa12.86□□□□□ -0.35
SMARCE1-203ENST00000377808 C4orf32Q8N8J7 132 aa12.86□□□□□ -0.35
SMARCE1-203ENST00000377808 SYMPKQ92797 1274 aaKnown RBP12.86□□□□□ -0.35
SMARCE1-203ENST00000377808 LPPQ93052 612 aa12.86□□□□□ -0.35
SMARCE1-203ENST00000377808 LMAN2LQ9H0V9 348 aa12.86□□□□□ -0.35
SMARCE1-203ENST00000377808 MINDY3Q9H8M7 445 aa12.86□□□□□ -0.35
SMARCE1-203ENST00000377808 GPRC5CQ9NQ84 441 aa12.86□□□□□ -0.35
SMARCE1-203ENST00000377808 AGPAT5Q9NUQ2 364 aa12.86□□□□□ -0.35
SMARCE1-203ENST00000377808 FAM105AQ9NUU6 356 aa12.86□□□□□ -0.35
SMARCE1-203ENST00000377808 PLAGL2Q9UPG8 496 aa12.86□□□□□ -0.35
SMARCE1-203ENST00000377808 KIAA1024Q9UPX6 916 aa12.86□□□□□ -0.35
SMARCE1-203ENST00000377808 INPP5FQ9Y2H2 1132 aa12.86□□□□□ -0.35
SMARCE1-203ENST00000377808 VCANP13611 3396 aa12.85□□□□□ -0.35
SMARCE1-203ENST00000377808 KIAA1671Q9BY89 1806 aa12.85□□□□□ -0.35
SMARCE1-203ENST00000377808 LRRIQ4A6NIV6 560 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms