RNA–Protein interactions for RNA: ENST00000377475.7

SEC23B-204, Transcript of Sec23 homolog B, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23B, Length 3,405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-204ENST00000377475 CETN1Q12798 172 aa12.48□□□□□ -0.41
SEC23B-204ENST00000377475 TRIM68Q6AZZ1 485 aa12.48□□□□□ -0.41
SEC23B-204ENST00000377475 SLFN12Q8IYM2 578 aa12.48□□□□□ -0.41
SEC23B-204ENST00000377475 LNX1Q8TBB1 728 aaPredicted RBP12.48□□□□□ -0.41
SEC23B-204ENST00000377475 ALG3Q92685 438 aa12.48□□□□□ -0.41
SEC23B-204ENST00000377475 ZNF653Q96CK0 615 aa12.48□□□□□ -0.41
SEC23B-204ENST00000377475 IQCDQ96DY2 449 aa12.48□□□□□ -0.41
SEC23B-204ENST00000377475 P2RX7Q99572 595 aaKnown RBP12.48□□□□□ -0.41
SEC23B-204ENST00000377475 RAB17Q9H0T7 212 aa12.48□□□□□ -0.41
SEC23B-204ENST00000377475 RASAL2Q9UJF2 1139 aa12.48□□□□□ -0.41
SEC23B-204ENST00000377475 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.48□□□□□ -0.41
SEC23B-204ENST00000377475 PCDHGC5Q9Y5F6 944 aa12.48□□□□□ -0.41
SEC23B-204ENST00000377475 CLDN3O15551 220 aa12.48□□□□□ -0.41
SEC23B-204ENST00000377475 NDUFB10O96000 172 aa12.48□□□□□ -0.41
SEC23B-204ENST00000377475 IFNB1P01574 187 aa12.48□□□□□ -0.41
SEC23B-204ENST00000377475 FERP16591 822 aa12.48□□□□□ -0.41
SEC23B-204ENST00000377475 SHMT1P34896 483 aa12.48□□□□□ -0.41
SEC23B-204ENST00000377475 MYO1EQ12965 1108 aa12.48□□□□□ -0.41
SEC23B-204ENST00000377475 CCDC137Q6PK04 289 aaKnown RBP12.48□□□□□ -0.41
SEC23B-204ENST00000377475 DPH6Q7L8W6 267 aa12.48□□□□□ -0.41
SEC23B-204ENST00000377475 CCDC197Q8NCU1 140 aa12.48□□□□□ -0.41
SEC23B-204ENST00000377475 CSRNP1Q96S65 589 aa12.48□□□□□ -0.41
SEC23B-204ENST00000377475 ZNF577Q9BSK1 485 aa12.48□□□□□ -0.41
SEC23B-204ENST00000377475 CDCA7Q9BWT1 371 aaPredicted RBP12.48□□□□□ -0.41
SEC23B-204ENST00000377475 INTS2Q9H0H0 1204 aaKnown RBP12.48□□□□□ -0.41
SEC23B-204ENST00000377475 PKD1L3Q7Z443 1732 aa12.48□□□□□ -0.41
SEC23B-204ENST00000377475 TRPM3Q9HCF6 1732 aaPredicted RBP12.48□□□□□ -0.41
SEC23B-204ENST00000377475 POC1B-GALNT4F8VUJ3 575 aa12.47□□□□□ -0.41
SEC23B-204ENST00000377475 CREB1P16220 341 aa12.47□□□□□ -0.41
SEC23B-204ENST00000377475 SOX5P35711 763 aa12.47□□□□□ -0.41
SEC23B-204ENST00000377475 CUL1Q13616 776 aa12.47□□□□□ -0.41
SEC23B-204ENST00000377475 SLC10A5Q5PT55 438 aa12.47□□□□□ -0.41
SEC23B-204ENST00000377475 FAM102BQ5T8I3 360 aa12.47□□□□□ -0.41
SEC23B-204ENST00000377475 JAMLQ86YT9 394 aa12.47□□□□□ -0.41
SEC23B-204ENST00000377475 CCDC63Q8NA47 563 aa12.47□□□□□ -0.41
SEC23B-204ENST00000377475 TBC1D22AQ8WUA7 517 aa12.47□□□□□ -0.41
SEC23B-204ENST00000377475 DHX38Q92620 1227 aaKnown RBP12.47□□□□□ -0.41
SEC23B-204ENST00000377475 DDX23Q9BUQ8 820 aaKnown RBP12.47□□□□□ -0.41
SEC23B-204ENST00000377475 PPEF1O14829 653 aaPredicted RBP12.47□□□□□ -0.41
SEC23B-204ENST00000377475 TOM1O60784 492 aa12.47□□□□□ -0.41
SEC23B-204ENST00000377475 ADCY8P40145 1251 aa12.47□□□□□ -0.41
SEC23B-204ENST00000377475 FMO5P49326 533 aa12.47□□□□□ -0.41
SEC23B-204ENST00000377475 MTMR3Q13615 1198 aa12.47□□□□□ -0.41
SEC23B-204ENST00000377475 UBL4BQ8N7F7 174 aa12.47□□□□□ -0.41
SEC23B-204ENST00000377475 C9orf72Q96LT7 481 aa12.47□□□□□ -0.41
SEC23B-204ENST00000377475 CBWD1Q9BRT8 395 aa12.47□□□□□ -0.41
SEC23B-204ENST00000377475 MTFR1LQ9H019 292 aa12.47□□□□□ -0.41
SEC23B-204ENST00000377475 TYW1Q9NV66 732 aaKnown RBP12.47□□□□□ -0.41
SEC23B-204ENST00000377475 FGFR1OP2Q9NVK5 253 aa12.47□□□□□ -0.41
SEC23B-204ENST00000377475 PPP1R1BQ9UD71 204 aaPredicted RBP12.47□□□□□ -0.41
SEC23B-204ENST00000377475 RASGRF2O14827 1237 aa12.47□□□□□ -0.41
SEC23B-204ENST00000377475 SLC16A4O15374 487 aa12.47□□□□□ -0.41
SEC23B-204ENST00000377475 TRIM37O94972 964 aa12.47□□□□□ -0.41
SEC23B-204ENST00000377475 COMTP21964 271 aa12.47□□□□□ -0.41
SEC23B-204ENST00000377475 CRKP46108 304 aa12.47□□□□□ -0.41
SEC23B-204ENST00000377475 SLC12A3P55017 1021 aa12.47□□□□□ -0.41
SEC23B-204ENST00000377475 PEX3P56589 373 aa12.47□□□□□ -0.41
SEC23B-204ENST00000377475 ZCWPW2Q504Y3 356 aa12.47□□□□□ -0.41
SEC23B-204ENST00000377475 PPP4R3AQ6IN85 833 aa12.47□□□□□ -0.41
SEC23B-204ENST00000377475 RINT1Q6NUQ1 792 aa12.47□□□□□ -0.41
SEC23B-204ENST00000377475 TMC3Q7Z5M5 1100 aa12.47□□□□□ -0.41
SEC23B-204ENST00000377475 NT5DC3Q86UY8 548 aa12.47□□□□□ -0.41
SEC23B-204ENST00000377475 HOOK3Q86VS8 718 aa12.47□□□□□ -0.41
SEC23B-204ENST00000377475 SRRM1Q8IYB3 904 aaKnown RBP12.47□□□□□ -0.41
SEC23B-204ENST00000377475 ACER1Q8TDN7 264 aa12.47□□□□□ -0.41
SEC23B-204ENST00000377475 OSBPL7Q9BZF2 842 aa12.47□□□□□ -0.41
SEC23B-204ENST00000377475 GOLGA8SH3BPF8 625 aa12.46□□□□□ -0.41
SEC23B-204ENST00000377475 GOLGA8MH3BSY2 632 aa12.46□□□□□ -0.41
SEC23B-204ENST00000377475 SPAG7O75391 227 aa12.46□□□□□ -0.41
SEC23B-204ENST00000377475 CCDC172P0C7W6 258 aa12.46□□□□□ -0.41
SEC23B-204ENST00000377475 BMP3P12645 472 aa12.46□□□□□ -0.41
SEC23B-204ENST00000377475 GCFC2P16383 781 aaKnown RBP12.46□□□□□ -0.41
SEC23B-204ENST00000377475 KYNUQ16719 465 aa12.46□□□□□ -0.41
SEC23B-204ENST00000377475 ACSF2Q96CM8 615 aaPredicted RBP12.46□□□□□ -0.41
SEC23B-204ENST00000377475 CHMP6Q96FZ7 201 aa12.46□□□□□ -0.41
SEC23B-204ENST00000377475 FAM167BQ9BTA0 163 aa12.46□□□□□ -0.41
SEC23B-204ENST00000377475 CXorf56Q9H5V9 222 aa12.46□□□□□ -0.41
SEC23B-204ENST00000377475 METTL14Q9HCE5 456 aaKnown RBP12.46□□□□□ -0.41
SEC23B-204ENST00000377475 AIPL1Q9NZN9 384 aa12.46□□□□□ -0.41
SEC23B-204ENST00000377475 USP21Q9UK80 565 aa12.46□□□□□ -0.41
SEC23B-204ENST00000377475 ANKRD62A6NC57 917 aa12.46□□□□□ -0.41
SEC23B-204ENST00000377475 TCP11X1B4DZS4 312 aa12.46□□□□□ -0.41
SEC23B-204ENST00000377475 F8VZ95 297 aa12.46□□□□□ -0.41
SEC23B-204ENST00000377475 H0Y3Z8 333 aa12.46□□□□□ -0.41
SEC23B-204ENST00000377475 BIRC3Q13489 604 aa12.46□□□□□ -0.41
SEC23B-204ENST00000377475 SYDE2Q5VT97 1194 aa12.46□□□□□ -0.41
SEC23B-204ENST00000377475 CYB5D1Q6P9G0 228 aa12.46□□□□□ -0.41
SEC23B-204ENST00000377475 PARP9Q8IXQ6 854 aa12.46□□□□□ -0.41
SEC23B-204ENST00000377475 SUPT20HQ8NEM7 779 aa12.46□□□□□ -0.41
SEC23B-204ENST00000377475 TAOK3Q9H2K8 898 aa12.46□□□□□ -0.41
SEC23B-204ENST00000377475 TOPORSQ9NS56 1045 aaPredicted RBP12.46□□□□□ -0.41
SEC23B-204ENST00000377475 BZW2Q9Y6E2 419 aaKnown RBP12.46□□□□□ -0.41
SEC23B-204ENST00000377475 SGPL1O95470 568 aa12.46□□□□□ -0.42
SEC23B-204ENST00000377475 SCP2P22307 547 aa12.46□□□□□ -0.42
SEC23B-204ENST00000377475 HSPA9P38646 679 aaKnown RBP12.46□□□□□ -0.42
SEC23B-204ENST00000377475 SESN3P58005 492 aa12.46□□□□□ -0.42
SEC23B-204ENST00000377475 SKOR1P84550 965 aa12.46□□□□□ -0.42
SEC23B-204ENST00000377475 KIAA1755Q5JYT7 1200 aa12.46□□□□□ -0.42
SEC23B-204ENST00000377475 PRCCQ92733 491 aaPredicted RBP12.46□□□□□ -0.42
SEC23B-204ENST00000377475 XPO6Q96QU8 1125 aaKnown RBP12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms