RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 TTC1Q99614 292 aa19.18■□□□□ 0.66
CLSTN1-202ENST00000377298 CAPS2Q9BXY5 557 aa19.18■□□□□ 0.66
CLSTN1-202ENST00000377298 PFASO15067 1338 aa19.18■□□□□ 0.66
CLSTN1-202ENST00000377298 MAFGO15525 162 aa19.18■□□□□ 0.66
CLSTN1-202ENST00000377298 ATP1A2P50993 1020 aa19.18■□□□□ 0.66
CLSTN1-202ENST00000377298 PNMA8AQ86V59 439 aaPredicted RBP19.18■□□□□ 0.66
CLSTN1-202ENST00000377298 PRPF31Q8WWY3 499 aaKnown RBP19.18■□□□□ 0.66
CLSTN1-202ENST00000377298 JMJD4Q9H9V9 463 aa19.18■□□□□ 0.66
CLSTN1-202ENST00000377298 CACYBPQ9HB71 228 aaKnown RBP19.18■□□□□ 0.66
CLSTN1-202ENST00000377298 XRRA1Q6P2D8 792 aa19.18■□□□□ 0.66
CLSTN1-202ENST00000377298 ANKRD13AQ8IZ07 590 aa19.18■□□□□ 0.66
CLSTN1-202ENST00000377298 CFAP57Q96MR6 1250 aa19.18■□□□□ 0.66
CLSTN1-202ENST00000377298 ASNSD1Q9NWL6 643 aa19.18■□□□□ 0.66
CLSTN1-202ENST00000377298 ESYT2A0FGR8 921 aa19.18■□□□□ 0.66
CLSTN1-202ENST00000377298 TJP3O95049 919 aa19.18■□□□□ 0.66
CLSTN1-202ENST00000377298 SAAL1Q96ER3 474 aa19.18■□□□□ 0.66
CLSTN1-202ENST00000377298 EDEM3Q9BZQ6 932 aa19.18■□□□□ 0.66
CLSTN1-202ENST00000377298 ZMYND12Q9H0C1 365 aa19.18■□□□□ 0.66
CLSTN1-202ENST00000377298 SMARCAD1Q9H4L7 1026 aa19.18■□□□□ 0.66
CLSTN1-202ENST00000377298 KCNH4Q9UQ05 1017 aa19.18■□□□□ 0.66
CLSTN1-202ENST00000377298 A0A1W2PQC6 194 aa19.17■□□□□ 0.66
CLSTN1-202ENST00000377298 DR1Q01658 176 aa19.17■□□□□ 0.66
CLSTN1-202ENST00000377298 TFDP2Q14188 446 aa19.17■□□□□ 0.66
CLSTN1-202ENST00000377298 DUOXA2Q1HG44 320 aa19.17■□□□□ 0.66
CLSTN1-202ENST00000377298 CHST13Q8NET6 341 aa19.17■□□□□ 0.66
CLSTN1-202ENST00000377298 LRRC8CQ8TDW0 803 aa19.17■□□□□ 0.66
CLSTN1-202ENST00000377298 ATP8A1Q9Y2Q0 1164 aa19.17■□□□□ 0.66
CLSTN1-202ENST00000377298 CCDC160A6NGH7 325 aa19.17■□□□□ 0.66
CLSTN1-202ENST00000377298 RGL2O15211 777 aa19.17■□□□□ 0.66
CLSTN1-202ENST00000377298 CDO1Q16878 200 aa19.17■□□□□ 0.66
CLSTN1-202ENST00000377298 CYFIP1Q7L576 1253 aa19.17■□□□□ 0.66
CLSTN1-202ENST00000377298 KCTD17Q8N5Z5 321 aa19.17■□□□□ 0.66
CLSTN1-202ENST00000377298 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.17■□□□□ 0.663e-6■■■■■ 50
CLSTN1-202ENST00000377298 CNTNAP5Q8WYK1 1306 aa19.17■□□□□ 0.66
CLSTN1-202ENST00000377298 RNF149Q8NC42 400 aa19.17■□□□□ 0.66
CLSTN1-202ENST00000377298 UBE4BO95155 1302 aa19.17■□□□□ 0.66
CLSTN1-202ENST00000377298 DRAP1Q14919 205 aaPredicted RBP19.17■□□□□ 0.66
CLSTN1-202ENST00000377298 CYP4F22Q6NT55 531 aa19.17■□□□□ 0.66
CLSTN1-202ENST00000377298 KIF9Q9HAQ2 790 aa19.17■□□□□ 0.66
CLSTN1-202ENST00000377298 SLC8A2Q9UPR5 921 aa19.17■□□□□ 0.66
CLSTN1-202ENST00000377298 ZRANB2O95218 330 aaKnown RBP eCLIP19.16■□□□□ 0.66
CLSTN1-202ENST00000377298 MSH2P43246 934 aa19.16■□□□□ 0.66
CLSTN1-202ENST00000377298 IL9RQ01113 521 aa19.16■□□□□ 0.66
CLSTN1-202ENST00000377298 SAMD7Q7Z3H4 446 aa19.16■□□□□ 0.66
CLSTN1-202ENST00000377298 FBXL13Q8NEE6 735 aa19.16■□□□□ 0.66
CLSTN1-202ENST00000377298 ZWILCHQ9H900 591 aa19.16■□□□□ 0.66
CLSTN1-202ENST00000377298 POLLQ9UGP5 575 aa19.16■□□□□ 0.66
CLSTN1-202ENST00000377298 SYNGAP1Q96PV0 1343 aa19.16■□□□□ 0.66
CLSTN1-202ENST00000377298 KLRK1P26718 216 aa19.16■□□□□ 0.66
CLSTN1-202ENST00000377298 ZNF157P51786 506 aaPredicted RBP19.16■□□□□ 0.66
CLSTN1-202ENST00000377298 DHX9Q08211 1270 aaKnown RBP19.16■□□□□ 0.66
CLSTN1-202ENST00000377298 MXD4Q14582 209 aaPredicted RBP19.16■□□□□ 0.66
CLSTN1-202ENST00000377298 TRIM72Q6ZMU5 477 aa19.16■□□□□ 0.66
CLSTN1-202ENST00000377298 RIT2Q99578 217 aa19.16■□□□□ 0.66
CLSTN1-202ENST00000377298 C7orf25Q9BPX7 421 aa19.16■□□□□ 0.66
CLSTN1-202ENST00000377298 FAM205CA6NFA0 338 aa19.16■□□□□ 0.66
CLSTN1-202ENST00000377298 FOXN1O15353 648 aa19.16■□□□□ 0.66
CLSTN1-202ENST00000377298 CETPP11597 493 aa19.16■□□□□ 0.66
CLSTN1-202ENST00000377298 RAPH1Q70E73 1250 aa19.16■□□□□ 0.66
CLSTN1-202ENST00000377298 METTL16Q86W50 562 aaKnown RBP19.16■□□□□ 0.66
CLSTN1-202ENST00000377298 TTC13Q8NBP0 860 aa19.16■□□□□ 0.66
CLSTN1-202ENST00000377298 RAET1EQ8TD07 263 aa19.16■□□□□ 0.66
CLSTN1-202ENST00000377298 WHAMMQ8TF30 809 aa19.16■□□□□ 0.66
CLSTN1-202ENST00000377298 KAZALD1Q96I82 304 aa19.16■□□□□ 0.66
CLSTN1-202ENST00000377298 S100BP04271 92 aaPredicted RBP19.15■□□□□ 0.66
CLSTN1-202ENST00000377298 TGFB2P61812 414 aa19.15■□□□□ 0.66
CLSTN1-202ENST00000377298 ZNF560Q96MR9 790 aa19.15■□□□□ 0.66
CLSTN1-202ENST00000377298 ANO9A1A5B4 782 aa19.15■□□□□ 0.66
CLSTN1-202ENST00000377298 CCDC151A5D8V7 595 aa19.15■□□□□ 0.66
CLSTN1-202ENST00000377298 NOL3O60936 208 aaKnown RBP19.15■□□□□ 0.66
CLSTN1-202ENST00000377298 GH1P01241 217 aa19.15■□□□□ 0.66
CLSTN1-202ENST00000377298 TRIM42Q8IWZ5 723 aa19.15■□□□□ 0.66
CLSTN1-202ENST00000377298 PDIK1LQ8N165 341 aa19.15■□□□□ 0.66
CLSTN1-202ENST00000377298 SKA2Q8WVK7 121 aaPredicted RBP19.15■□□□□ 0.66
CLSTN1-202ENST00000377298 PDLIM2Q96JY6 352 aa19.15■□□□□ 0.66
CLSTN1-202ENST00000377298 ZFYVE28Q9HCC9 887 aa19.15■□□□□ 0.66
CLSTN1-202ENST00000377298 DEPDC5O75140 1603 aa19.15■□□□□ 0.66
CLSTN1-202ENST00000377298 SLC16A3O15427 465 aaKnown RBP19.15■□□□□ 0.66
CLSTN1-202ENST00000377298 FGGP02679 453 aa19.15■□□□□ 0.66
CLSTN1-202ENST00000377298 PRKCBP05771 671 aa19.15■□□□□ 0.66
CLSTN1-202ENST00000377298 NXNQ6DKJ4 435 aa19.15■□□□□ 0.66
CLSTN1-202ENST00000377298 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.15■□□□□ 0.66
CLSTN1-202ENST00000377298 HSPH1Q92598 858 aa19.15■□□□□ 0.66
CLSTN1-202ENST00000377298 ZDHHC15Q96MV8 337 aa19.15■□□□□ 0.66
CLSTN1-202ENST00000377298 THOC5Q13769 683 aaKnown RBP19.15■□□□□ 0.66
CLSTN1-202ENST00000377298 SCYL3Q8IZE3 742 aa19.15■□□□□ 0.66
CLSTN1-202ENST00000377298 TRIM56Q9BRZ2 755 aaKnown RBP19.15■□□□□ 0.66
CLSTN1-202ENST00000377298 KATNAL1Q9BW62 490 aa19.15■□□□□ 0.66
CLSTN1-202ENST00000377298 PDE11AQ9HCR9 933 aa19.15■□□□□ 0.66
CLSTN1-202ENST00000377298 INTS9Q9NV88 658 aaKnown RBP19.15■□□□□ 0.66
CLSTN1-202ENST00000377298 SUCLA2Q9P2R7 463 aaPredicted RBP19.15■□□□□ 0.66
CLSTN1-202ENST00000377298 VWDEQ8N2E2 1590 aa19.15■□□□□ 0.66
CLSTN1-202ENST00000377298 EMSYQ7Z589 1322 aa19.14■□□□□ 0.66
CLSTN1-202ENST00000377298 POLR1AO95602 1720 aaPredicted RBP19.14■□□□□ 0.66
CLSTN1-202ENST00000377298 PALMO75781 387 aa19.14■□□□□ 0.66
CLSTN1-202ENST00000377298 SF3A3Q12874 501 aaKnown RBP eCLIP19.14■□□□□ 0.661e-8■■■□□ 18
CLSTN1-202ENST00000377298 SPATS2Q86XZ4 545 aaKnown RBP19.14■□□□□ 0.66
CLSTN1-202ENST00000377298 RNF10Q8N5U6 811 aaKnown RBP19.14■□□□□ 0.66
CLSTN1-202ENST00000377298 C11orf70Q9BRQ4 267 aa19.14■□□□□ 0.66
CLSTN1-202ENST00000377298 SRGNP10124 158 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms