RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 OXER1Q8TDS5 423 aa23.6■■□□□ 1.37
VSX1-201ENST00000376707 ZNF558Q96NG5 402 aa23.6■■□□□ 1.37
VSX1-201ENST00000376707 FDXACB1Q9BRP7 624 aaPredicted RBP23.6■■□□□ 1.37
VSX1-201ENST00000376707 CLEC1BQ9P126 229 aa23.6■■□□□ 1.37
VSX1-201ENST00000376707 VAV3Q9UKW4 847 aa23.6■■□□□ 1.37
VSX1-201ENST00000376707 LZTS1Q9Y250 596 aa23.6■■□□□ 1.37
VSX1-201ENST00000376707 WDR81Q562E7 1941 aa23.59■■□□□ 1.37
VSX1-201ENST00000376707 DCXO43602 365 aa23.59■■□□□ 1.37
VSX1-201ENST00000376707 CTDNEP1O95476 244 aa23.59■■□□□ 1.37
VSX1-201ENST00000376707 EOMESO95936 686 aa23.59■■□□□ 1.37
VSX1-201ENST00000376707 PPM1AP35813 382 aa23.59■■□□□ 1.37
VSX1-201ENST00000376707 PLCB3Q01970 1234 aa23.59■■□□□ 1.37
VSX1-201ENST00000376707 PLA2G4FQ68DD2 849 aa23.59■■□□□ 1.37
VSX1-201ENST00000376707 KCNT2Q6UVM3 1135 aa23.59■■□□□ 1.37
VSX1-201ENST00000376707 LRRC55Q6ZSA7 311 aa23.59■■□□□ 1.37
VSX1-201ENST00000376707 ZNF410Q86VK4 478 aa23.59■■□□□ 1.37
VSX1-201ENST00000376707 MRPS27Q92552 414 aaKnown RBP23.59■■□□□ 1.37
VSX1-201ENST00000376707 INO80BQ9C086 356 aaPredicted RBP23.59■■□□□ 1.37
VSX1-201ENST00000376707 CHST12Q9NRB3 414 aa23.59■■□□□ 1.37
VSX1-201ENST00000376707 BARX2Q9UMQ3 279 aaPredicted RBP23.59■■□□□ 1.37
VSX1-201ENST00000376707 PLXNA4Q9HCM2 1894 aa23.58■■□□□ 1.37
VSX1-201ENST00000376707 FSD2A1L4K1 749 aa23.58■■□□□ 1.37
VSX1-201ENST00000376707 PER2O15055 1255 aa23.58■■□□□ 1.37
VSX1-201ENST00000376707 TBX3O15119 743 aa23.58■■□□□ 1.37
VSX1-201ENST00000376707 EYA4O95677 639 aa23.58■■□□□ 1.37
VSX1-201ENST00000376707 GLP2RO95838 553 aa23.58■■□□□ 1.37
VSX1-201ENST00000376707 COASYQ13057 564 aa23.58■■□□□ 1.37
VSX1-201ENST00000376707 CLLU1OSQ5K130 101 aa23.58■■□□□ 1.37
VSX1-201ENST00000376707 HELQQ8TDG4 1101 aa23.58■■□□□ 1.37
VSX1-201ENST00000376707 SLC7A3Q8WY07 619 aa23.58■■□□□ 1.37
VSX1-201ENST00000376707 NLRP4Q96MN2 994 aa23.58■■□□□ 1.37
VSX1-201ENST00000376707 CDCA3Q99618 268 aaPredicted RBP23.58■■□□□ 1.37
VSX1-201ENST00000376707 BRMS1Q9HCU9 246 aa23.58■■□□□ 1.37
VSX1-201ENST00000376707 CYP26B1Q9NR63 512 aa23.58■■□□□ 1.37
VSX1-201ENST00000376707 P4HBP07237 508 aaKnown RBP23.57■■□□□ 1.36
VSX1-201ENST00000376707 PBX3P40426 434 aa23.57■■□□□ 1.36
VSX1-201ENST00000376707 KRT17Q04695 432 aa23.57■■□□□ 1.36
VSX1-201ENST00000376707 PLPP4Q5VZY2 271 aa23.57■■□□□ 1.36
VSX1-201ENST00000376707 ZNF598Q86UK7 904 aaKnown RBP23.57■■□□□ 1.36
VSX1-201ENST00000376707 SMRP1Q8NCR6 262 aa23.57■■□□□ 1.36
VSX1-201ENST00000376707 TCF25Q9BQ70 676 aa23.57■■□□□ 1.36
VSX1-201ENST00000376707 ENTPD7Q9NQZ7 604 aa23.57■■□□□ 1.36
VSX1-201ENST00000376707 SPG21Q9NZD8 308 aa23.57■■□□□ 1.36
VSX1-201ENST00000376707 PIN4Q9Y237 131 aaKnown RBP23.57■■□□□ 1.36
VSX1-201ENST00000376707 PRR33A8MZF0 331 aa23.56■■□□□ 1.36
VSX1-201ENST00000376707 FSCN2O14926 492 aa23.56■■□□□ 1.36
VSX1-201ENST00000376707 ATF7P17544 494 aaPredicted RBP23.56■■□□□ 1.36
VSX1-201ENST00000376707 KRT2P35908 639 aa23.56■■□□□ 1.36
VSX1-201ENST00000376707 NPEPPSP55786 919 aa23.56■■□□□ 1.36
VSX1-201ENST00000376707 ME3Q16798 604 aa23.56■■□□□ 1.36
VSX1-201ENST00000376707 DUSP6Q16828 381 aa23.56■■□□□ 1.36
VSX1-201ENST00000376707 TWF2Q6IBS0 349 aaKnown RBP23.56■■□□□ 1.36
VSX1-201ENST00000376707 POTEDQ86YR6 584 aa23.56■■□□□ 1.36
VSX1-201ENST00000376707 KSR1Q8IVT5 923 aa23.56■■□□□ 1.36
VSX1-201ENST00000376707 EXOC8Q8IYI6 725 aa23.56■■□□□ 1.36
VSX1-201ENST00000376707 NECAB1Q8N987 351 aa23.56■■□□□ 1.36
VSX1-201ENST00000376707 HAS1Q92839 578 aa23.56■■□□□ 1.36
VSX1-201ENST00000376707 FAM122AQ96E09 287 aa23.56■■□□□ 1.36
VSX1-201ENST00000376707 CEP170P1Q96L14 293 aa23.56■■□□□ 1.36
VSX1-201ENST00000376707 MRPL9Q9BYD2 267 aaKnown RBP23.56■■□□□ 1.36
VSX1-201ENST00000376707 BAG4O95429 457 aaKnown RBP23.55■■□□□ 1.36
VSX1-201ENST00000376707 SEC24BO95487 1268 aa23.55■■□□□ 1.36
VSX1-201ENST00000376707 SRGAP2BP0DMP2 458 aa23.55■■□□□ 1.36
VSX1-201ENST00000376707 PHKA2P46019 1235 aa23.55■■□□□ 1.36
VSX1-201ENST00000376707 POLGP54098 1239 aaPredicted RBP23.55■■□□□ 1.36
VSX1-201ENST00000376707 NR5A1Q13285 461 aa23.55■■□□□ 1.36
VSX1-201ENST00000376707 EPHA7Q15375 998 aa23.55■■□□□ 1.36
VSX1-201ENST00000376707 EARS2Q5JPH6 523 aaKnown RBP23.55■■□□□ 1.36
VSX1-201ENST00000376707 NCAPH2Q6IBW4 605 aa23.55■■□□□ 1.36
VSX1-201ENST00000376707 CATSPER4Q7RTX7 472 aa23.55■■□□□ 1.36
VSX1-201ENST00000376707 SLFN12Q8IYM2 578 aa23.55■■□□□ 1.36
VSX1-201ENST00000376707 GTF3C6Q969F1 213 aa23.55■■□□□ 1.36
VSX1-201ENST00000376707 LXNQ9BS40 222 aa23.55■■□□□ 1.36
VSX1-201ENST00000376707 NGRNQ9NPE2 291 aaKnown RBP23.55■■□□□ 1.36
VSX1-201ENST00000376707 WRAP73Q9P2S5 460 aaPredicted RBP23.55■■□□□ 1.36
VSX1-201ENST00000376707 PPME1Q9Y570 386 aa23.55■■□□□ 1.36
VSX1-201ENST00000376707 SKIP12755 728 aa23.54■■□□□ 1.36
VSX1-201ENST00000376707 FDPSP14324 419 aaKnown RBP23.54■■□□□ 1.36
VSX1-201ENST00000376707 PLA2G5P39877 138 aa23.54■■□□□ 1.36
VSX1-201ENST00000376707 RBM10P98175 930 aaKnown RBP23.54■■□□□ 1.36
VSX1-201ENST00000376707 TRAIPQ9BWF2 469 aa23.54■■□□□ 1.36
VSX1-201ENST00000376707 USP15Q9Y4E8 981 aaPredicted RBP23.54■■□□□ 1.36
VSX1-201ENST00000376707 COL4A3BPQ9Y5P4 624 aa23.54■■□□□ 1.36
VSX1-201ENST00000376707 FAM205CA6NFA0 338 aa23.53■■□□□ 1.36
VSX1-201ENST00000376707 YWHABP31946 246 aaKnown RBP23.53■■□□□ 1.36
VSX1-201ENST00000376707 RFC5P40937 340 aa23.53■■□□□ 1.36
VSX1-201ENST00000376707 ALDH7A1P49419 539 aaKnown RBP23.53■■□□□ 1.36
VSX1-201ENST00000376707 NEK4P51957 841 aa23.53■■□□□ 1.36
VSX1-201ENST00000376707 OTUD6AQ7L8S5 288 aa23.53■■□□□ 1.36
VSX1-201ENST00000376707 TMC7Q7Z402 723 aa23.53■■□□□ 1.36
VSX1-201ENST00000376707 C4orf19Q8IY42 314 aa23.53■■□□□ 1.36
VSX1-201ENST00000376707 ZNF579Q8NAF0 562 aaKnown RBP23.53■■□□□ 1.36
VSX1-201ENST00000376707 VN1R2Q8NFZ6 395 aa23.53■■□□□ 1.36
VSX1-201ENST00000376707 PSPC1Q8WXF1 523 aaKnown RBP23.53■■□□□ 1.36
VSX1-201ENST00000376707 RSPH1Q8WYR4 309 aa23.53■■□□□ 1.36
VSX1-201ENST00000376707 DHX33Q9H6R0 707 aaKnown RBP23.53■■□□□ 1.36
VSX1-201ENST00000376707 RGL1Q9NZL6 768 aa23.53■■□□□ 1.36
VSX1-201ENST00000376707 ARIH1Q9Y4X5 557 aaPredicted RBP23.53■■□□□ 1.36
VSX1-201ENST00000376707 LARGE1O95461 756 aa23.52■■□□□ 1.36
VSX1-201ENST00000376707 RAB27AP51159 221 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms