RNA–Protein interactions for RNA: ENST00000375759.7

SPEN-201, Transcript of spen family transcriptional repressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPEN, Length 12,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-201ENST00000375759 STK36Q9NRP7 1315 aa10.46□□□□□ -0.73
SPEN-201ENST00000375759 CCNA1P78396 465 aa10.46□□□□□ -0.74
SPEN-201ENST00000375759 GFPT1Q06210 699 aaPredicted RBP10.46□□□□□ -0.74
SPEN-201ENST00000375759 THAP11Q96EK4 314 aa10.46□□□□□ -0.74
SPEN-201ENST00000375759 OTUB1Q96FW1 271 aaPredicted RBP10.46□□□□□ -0.74
SPEN-201ENST00000375759 SERPINB13Q9UIV8 391 aa10.46□□□□□ -0.74
SPEN-201ENST00000375759 HNRNPRO43390 633 aaKnown RBP10.46□□□□□ -0.74
SPEN-201ENST00000375759 ORC2Q13416 577 aaPredicted RBP10.46□□□□□ -0.74
SPEN-201ENST00000375759 KRT33BQ14525 404 aa10.46□□□□□ -0.74
SPEN-201ENST00000375759 WWP1Q9H0M0 922 aa10.46□□□□□ -0.74
SPEN-201ENST00000375759 GREM2Q9H772 168 aa10.46□□□□□ -0.74
SPEN-201ENST00000375759 NCKAP5LQ9HCH0 1330 aa10.46□□□□□ -0.74
SPEN-201ENST00000375759 CARSP49589 748 aaKnown RBP10.46□□□□□ -0.74
SPEN-201ENST00000375759 DDX56Q9NY93 547 aaKnown RBP10.46□□□□□ -0.74
SPEN-201ENST00000375759 FNDC3AQ9Y2H6 1198 aaKnown RBP10.46□□□□□ -0.74
SPEN-201ENST00000375759 DDX5P17844 614 aaKnown RBP10.46□□□□□ -0.74
SPEN-201ENST00000375759 TBXAS1P24557 533 aaPredicted RBP10.46□□□□□ -0.74
SPEN-201ENST00000375759 MAP4P27816 1152 aaKnown RBP10.46□□□□□ -0.74
SPEN-201ENST00000375759 EPAS1Q99814 870 aa10.46□□□□□ -0.74
SPEN-201ENST00000375759 NGRNQ9NPE2 291 aaKnown RBP10.46□□□□□ -0.74
SPEN-201ENST00000375759 ZSWIM5Q9P217 1185 aa10.46□□□□□ -0.74
SPEN-201ENST00000375759 ARL2BPQ9Y2Y0 163 aa10.46□□□□□ -0.74
SPEN-201ENST00000375759 ANKRD65E5RJM6 399 aa10.46□□□□□ -0.74
SPEN-201ENST00000375759 MEFVO15553 781 aaPredicted RBP10.46□□□□□ -0.74
SPEN-201ENST00000375759 BMP3P12645 472 aa10.46□□□□□ -0.74
SPEN-201ENST00000375759 S100A5P33763 92 aa10.46□□□□□ -0.74
SPEN-201ENST00000375759 KCNA6P17658 529 aa10.45□□□□□ -0.74
SPEN-201ENST00000375759 CCDC195A0A1B0GUA6 201 aa10.45□□□□□ -0.74
SPEN-201ENST00000375759 CFAP69A5D8W1 941 aa10.45□□□□□ -0.74
SPEN-201ENST00000375759 TCP10L2B9ZVM9 353 aa10.45□□□□□ -0.74
SPEN-201ENST00000375759 CCDC85BQ15834 202 aaPredicted RBP10.45□□□□□ -0.74
SPEN-201ENST00000375759 PPP6R3Q5H9R7 873 aaPredicted RBP10.45□□□□□ -0.74
SPEN-201ENST00000375759 KIAA0825Q8IV33 1275 aa10.45□□□□□ -0.74
SPEN-201ENST00000375759 ZNF555Q8NEP9 628 aa10.45□□□□□ -0.74
SPEN-201ENST00000375759 BRIP1Q9BX63 1249 aa10.45□□□□□ -0.74
SPEN-201ENST00000375759 VPS11Q9H270 941 aa10.45□□□□□ -0.74
SPEN-201ENST00000375759 IRAK4Q9NWZ3 460 aa10.45□□□□□ -0.74
SPEN-201ENST00000375759 HACD3Q9P035 362 aa10.45□□□□□ -0.74
SPEN-201ENST00000375759 LRRC53A6NM62 1247 aa10.45□□□□□ -0.74
SPEN-201ENST00000375759 INPP5AQ14642 412 aa10.45□□□□□ -0.74
SPEN-201ENST00000375759 CCDC137Q6PK04 289 aaKnown RBP10.45□□□□□ -0.74
SPEN-201ENST00000375759 TMEM35BQ8NCS4 154 aa10.45□□□□□ -0.74
SPEN-201ENST00000375759 DNAJC12Q9UKB3 198 aa10.45□□□□□ -0.74
SPEN-201ENST00000375759 ATP11BQ9Y2G3 1177 aa10.45□□□□□ -0.74
SPEN-201ENST00000375759 SKOR1P84550 965 aa10.45□□□□□ -0.74
SPEN-201ENST00000375759 SYDE2Q5VT97 1194 aa10.45□□□□□ -0.74
SPEN-201ENST00000375759 NFRKBQ6P4R8 1299 aa10.45□□□□□ -0.74
SPEN-201ENST00000375759 KRT27Q7Z3Y8 459 aa10.45□□□□□ -0.74
SPEN-201ENST00000375759 KDM4CQ9H3R0 1056 aa10.45□□□□□ -0.74
SPEN-201ENST00000375759 SEPT3Q9UH03 358 aa10.45□□□□□ -0.74
SPEN-201ENST00000375759 BLOC1S6Q9UL45 172 aa10.45□□□□□ -0.74
SPEN-201ENST00000375759 PGM1P36871 562 aa10.45□□□□□ -0.74
SPEN-201ENST00000375759 SZRD1Q7Z422 152 aa10.45□□□□□ -0.74
SPEN-201ENST00000375759 SRLQ86TD4 932 aa10.45□□□□□ -0.74
SPEN-201ENST00000375759 SPICE1Q8N0Z3 855 aa10.45□□□□□ -0.74
SPEN-201ENST00000375759 PI4K2BG5E9Z4 385 aa10.45□□□□□ -0.74
SPEN-201ENST00000375759 GOLGA8MH3BSY2 632 aa10.45□□□□□ -0.74
SPEN-201ENST00000375759 ZSCAN20P17040 1043 aaPredicted RBP10.45□□□□□ -0.74
SPEN-201ENST00000375759 PMS1P54277 932 aaKnown RBP10.45□□□□□ -0.74
SPEN-201ENST00000375759 TRIM72Q6ZMU5 477 aa10.45□□□□□ -0.74
SPEN-201ENST00000375759 TCP11X1B4DZS4 312 aa10.45□□□□□ -0.74
SPEN-201ENST00000375759 CATSPER3Q86XQ3 398 aa10.45□□□□□ -0.74
SPEN-201ENST00000375759 ZNF564Q8TBZ8 553 aaPredicted RBP10.45□□□□□ -0.74
SPEN-201ENST00000375759 IP6K2Q9UHH9 426 aa10.45□□□□□ -0.74
SPEN-201ENST00000375759 FAM95CA0A1B0GW59 222 aa10.45□□□□□ -0.74
SPEN-201ENST00000375759 PLEKHG3A1L390 1219 aa10.45□□□□□ -0.74
SPEN-201ENST00000375759 KCNA1Q09470 495 aa10.45□□□□□ -0.74
SPEN-201ENST00000375759 SYDE1Q6ZW31 735 aaPredicted RBP10.45□□□□□ -0.74
SPEN-201ENST00000375759 PIGSQ96S52 555 aa10.45□□□□□ -0.74
SPEN-201ENST00000375759 MLXIPLQ9NP71 852 aa10.45□□□□□ -0.74
SPEN-201ENST00000375759 BAZ2BQ9UIF8 2168 aaKnown RBP10.45□□□□□ -0.74
SPEN-201ENST00000375759 NR3C1P04150 777 aa10.45□□□□□ -0.74
SPEN-201ENST00000375759 DAB2IPQ5VWQ8 1189 aa10.45□□□□□ -0.74
SPEN-201ENST00000375759 SMG5Q9UPR3 1016 aaKnown RBP10.45□□□□□ -0.74
SPEN-201ENST00000375759 C16orf96A6NNT2 1141 aa10.45□□□□□ -0.74
SPEN-201ENST00000375759 KIAA1755Q5JYT7 1200 aa10.45□□□□□ -0.74
SPEN-201ENST00000375759 ULK4Q96C45 1275 aa10.45□□□□□ -0.74
SPEN-201ENST00000375759 HEY1Q9Y5J3 304 aa10.45□□□□□ -0.74
SPEN-201ENST00000375759 hCG_2014768A0A024R1R8 64 aa10.44□□□□□ -0.74
SPEN-201ENST00000375759 CDC25AP30304 524 aa10.44□□□□□ -0.74
SPEN-201ENST00000375759 NSUN2Q08J23 767 aaKnown RBP eCLIP10.44□□□□□ -0.74
SPEN-201ENST00000375759 TRADDQ15628 312 aa10.44□□□□□ -0.74
SPEN-201ENST00000375759 KIRREL3Q8IZU9 778 aa10.44□□□□□ -0.74
SPEN-201ENST00000375759 DHX36Q9H2U1 1008 aaKnown RBP10.44□□□□□ -0.74
SPEN-201ENST00000375759 JAK3P52333 1124 aa10.44□□□□□ -0.74
SPEN-201ENST00000375759 LRRC8EQ6NSJ5 796 aa10.44□□□□□ -0.74
SPEN-201ENST00000375759 KIF2CQ99661 725 aa10.44□□□□□ -0.74
SPEN-201ENST00000375759 CYP4F11Q9HBI6 524 aa10.44□□□□□ -0.74
SPEN-201ENST00000375759 MRPS25P82663 173 aaKnown RBP10.44□□□□□ -0.74
SPEN-201ENST00000375759 TAP1Q03518 808 aa10.44□□□□□ -0.74
SPEN-201ENST00000375759 DNAL1Q4LDG9 190 aa10.44□□□□□ -0.74
SPEN-201ENST00000375759 TRMT2AQ8IZ69 625 aaKnown RBP10.44□□□□□ -0.74
SPEN-201ENST00000375759 IL17REQ8NFR9 667 aa10.44□□□□□ -0.74
SPEN-201ENST00000375759 ADAMTS12P58397 1594 aa10.44□□□□□ -0.74
SPEN-201ENST00000375759 KRT75O95678 551 aa10.44□□□□□ -0.74
SPEN-201ENST00000375759 KRT16P08779 473 aa10.44□□□□□ -0.74
SPEN-201ENST00000375759 PHKG2P15735 406 aa10.44□□□□□ -0.74
SPEN-201ENST00000375759 STAT4Q14765 748 aa10.44□□□□□ -0.74
SPEN-201ENST00000375759 ZNF667Q5HYK9 610 aa10.44□□□□□ -0.74
SPEN-201ENST00000375759 POTEAQ6S8J7 498 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms