RNA–Protein interactions for RNA: ENST00000374994.8

TGFBR1-202, Transcript of transforming growth factor beta receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFBR1, Length 6,516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-202ENST00000374994 ARFIP2P53365 341 aa22.64■■□□□ 1.21
TGFBR1-202ENST00000374994 PLCB4Q15147 1175 aa22.64■■□□□ 1.21
TGFBR1-202ENST00000374994 TTC17Q96AE7 1141 aa22.64■■□□□ 1.21
TGFBR1-202ENST00000374994 NMT2O60551 498 aa22.63■■□□□ 1.21
TGFBR1-202ENST00000374994 SPATA21Q7Z572 469 aa22.63■■□□□ 1.21
TGFBR1-202ENST00000374994 GLYCTKQ8IVS8 523 aa22.63■■□□□ 1.21
TGFBR1-202ENST00000374994 FUT8Q9BYC5 575 aa22.63■■□□□ 1.21
TGFBR1-202ENST00000374994 PPCSQ9HAB8 311 aa22.63■■□□□ 1.21
TGFBR1-202ENST00000374994 GCLMP48507 274 aa22.63■■□□□ 1.21
TGFBR1-202ENST00000374994 RHOT1Q8IXI2 618 aa22.63■■□□□ 1.21
TGFBR1-202ENST00000374994 SRBD1Q8N5C6 995 aaKnown RBP22.63■■□□□ 1.21
TGFBR1-202ENST00000374994 SLC38A10Q9HBR0 1119 aa22.63■■□□□ 1.21
TGFBR1-202ENST00000374994 ZNF211Q13398 564 aaPredicted RBP22.63■■□□□ 1.21
TGFBR1-202ENST00000374994 UPF3AQ9H1J1 476 aaKnown RBP22.63■■□□□ 1.21
TGFBR1-202ENST00000374994 GOLGA8IPA6NC78 632 aa22.63■■□□□ 1.21
TGFBR1-202ENST00000374994 GOLGA8JA6NMD2 632 aa22.63■■□□□ 1.21
TGFBR1-202ENST00000374994 VAMP7P51809 220 aa22.63■■□□□ 1.21
TGFBR1-202ENST00000374994 GRAMD1BQ3KR37 738 aa22.63■■□□□ 1.21
TGFBR1-202ENST00000374994 LARP7Q4G0J3 582 aaKnown RBP eCLIP22.63■■□□□ 1.21
TGFBR1-202ENST00000374994 CFAP36Q96G28 342 aa22.63■■□□□ 1.21
TGFBR1-202ENST00000374994 MSTO1Q9BUK6 570 aa22.63■■□□□ 1.21
TGFBR1-202ENST00000374994 INO80B-WBP1J3KQ70 363 aa22.63■■□□□ 1.21
TGFBR1-202ENST00000374994 EDRF1Q3B7T1 1238 aa22.63■■□□□ 1.21
TGFBR1-202ENST00000374994 CCNYQ8ND76 341 aa22.63■■□□□ 1.21
TGFBR1-202ENST00000374994 INO80BQ9C086 356 aaPredicted RBP22.63■■□□□ 1.21
TGFBR1-202ENST00000374994 PEX3P56589 373 aa22.62■■□□□ 1.21
TGFBR1-202ENST00000374994 ATP11CQ8NB49 1132 aa22.62■■□□□ 1.21
TGFBR1-202ENST00000374994 ZC3H15Q8WU90 426 aaKnown RBP22.62■■□□□ 1.21
TGFBR1-202ENST00000374994 PLA2G4AP47712 749 aa22.62■■□□□ 1.21
TGFBR1-202ENST00000374994 MRPL40Q9NQ50 206 aaKnown RBP22.62■■□□□ 1.21
TGFBR1-202ENST00000374994 TBXAS1P24557 533 aaPredicted RBP22.62■■□□□ 1.21
TGFBR1-202ENST00000374994 CA8P35219 290 aa22.62■■□□□ 1.21
TGFBR1-202ENST00000374994 SLC1A1P43005 524 aa22.62■■□□□ 1.21
TGFBR1-202ENST00000374994 ERGIC2Q96RQ1 377 aa22.62■■□□□ 1.21
TGFBR1-202ENST00000374994 FHOD1Q9Y613 1164 aa22.62■■□□□ 1.21
TGFBR1-202ENST00000374994 H0Y3Z8 333 aa22.62■■□□□ 1.21
TGFBR1-202ENST00000374994 ZNF185O15231 689 aa22.62■■□□□ 1.21
TGFBR1-202ENST00000374994 NCF2P19878 526 aaPredicted RBP22.62■■□□□ 1.21
TGFBR1-202ENST00000374994 CAPRIN2Q6IMN6 1127 aaKnown RBP22.62■■□□□ 1.21
TGFBR1-202ENST00000374994 SMG5Q9UPR3 1016 aaKnown RBP22.62■■□□□ 1.21
TGFBR1-202ENST00000374994 K7ERI5 159 aa22.62■■□□□ 1.21
TGFBR1-202ENST00000374994 LSP1P33241 339 aa22.62■■□□□ 1.21
TGFBR1-202ENST00000374994 PIGOQ8TEQ8 1089 aa22.62■■□□□ 1.21
TGFBR1-202ENST00000374994 FAF2Q96CS3 445 aa22.62■■□□□ 1.21
TGFBR1-202ENST00000374994 SMYD2Q9NRG4 433 aa22.62■■□□□ 1.21
TGFBR1-202ENST00000374994 SFI1A8K8P3 1242 aa22.61■■□□□ 1.21
TGFBR1-202ENST00000374994 TRIM66O15016 1216 aa22.61■■□□□ 1.21
TGFBR1-202ENST00000374994 HOXA13P31271 388 aaPredicted RBP22.61■■□□□ 1.21
TGFBR1-202ENST00000374994 XPO6Q96QU8 1125 aaKnown RBP22.61■■□□□ 1.21
TGFBR1-202ENST00000374994 FOXP3Q9BZS1 431 aa22.61■■□□□ 1.21
TGFBR1-202ENST00000374994 SBK1Q52WX2 424 aa22.61■■□□□ 1.21
TGFBR1-202ENST00000374994 FAM149B1Q96BN6 582 aa22.61■■□□□ 1.21
TGFBR1-202ENST00000374994 OLFM3Q96PB7 478 aa22.61■■□□□ 1.21
TGFBR1-202ENST00000374994 CYP26B1Q9NR63 512 aa22.61■■□□□ 1.21
TGFBR1-202ENST00000374994 IP6K2Q9UHH9 426 aa22.61■■□□□ 1.21
TGFBR1-202ENST00000374994 FAM107AO95990 144 aa22.61■■□□□ 1.21
TGFBR1-202ENST00000374994 RCSD1Q6JBY9 416 aa22.61■■□□□ 1.21
TGFBR1-202ENST00000374994 CEP95Q96GE4 821 aa22.61■■□□□ 1.21
TGFBR1-202ENST00000374994 DDX56Q9NY93 547 aaKnown RBP22.61■■□□□ 1.21
TGFBR1-202ENST00000374994 USP21Q9UK80 565 aa22.61■■□□□ 1.21
TGFBR1-202ENST00000374994 SATB1Q01826 763 aa22.61■■□□□ 1.21
TGFBR1-202ENST00000374994 BBS5Q8N3I7 341 aa22.61■■□□□ 1.21
TGFBR1-202ENST00000374994 NOA1Q8NC60 698 aaKnown RBP22.61■■□□□ 1.21
TGFBR1-202ENST00000374994 NXF1Q9UBU9 619 aaKnown RBP22.61■■□□□ 1.21
TGFBR1-202ENST00000374994 AP2B1P63010 937 aa22.6■■□□□ 1.21
TGFBR1-202ENST00000374994 ISCUQ9H1K1 167 aa22.6■■□□□ 1.21
TGFBR1-202ENST00000374994 NAB2Q15742 525 aa22.6■■□□□ 1.21
TGFBR1-202ENST00000374994 TMEM260Q9NX78 707 aa22.6■■□□□ 1.21
TGFBR1-202ENST00000374994 CCDC22O60826 627 aa22.6■■□□□ 1.21
TGFBR1-202ENST00000374994 KRT14P02533 472 aa22.6■■□□□ 1.21
TGFBR1-202ENST00000374994 PHEXP78562 749 aa22.6■■□□□ 1.21
TGFBR1-202ENST00000374994 SPOPLQ6IQ16 392 aa22.6■■□□□ 1.21
TGFBR1-202ENST00000374994 MAP3K14Q99558 947 aa22.6■■□□□ 1.21
TGFBR1-202ENST00000374994 AGPAT1Q99943 283 aa22.6■■□□□ 1.21
TGFBR1-202ENST00000374994 HEMGNQ9BXL5 484 aa22.6■■□□□ 1.21
TGFBR1-202ENST00000374994 UVRAGQ9P2Y5 699 aa22.6■■□□□ 1.21
TGFBR1-202ENST00000374994 NBPF26B4DH59 902 aa22.6■■□□□ 1.21
TGFBR1-202ENST00000374994 HSPA4LO95757 839 aa22.6■■□□□ 1.21
TGFBR1-202ENST00000374994 NBPF15Q8N660 670 aa22.6■■□□□ 1.21
TGFBR1-202ENST00000374994 SGSM3Q96HU1 749 aa22.6■■□□□ 1.21
TGFBR1-202ENST00000374994 STK33Q9BYT3 514 aa22.6■■□□□ 1.21
TGFBR1-202ENST00000374994 RBM12Q9NTZ6 932 aaKnown RBP22.6■■□□□ 1.21
TGFBR1-202ENST00000374994 AGPAT5Q9NUQ2 364 aa22.6■■□□□ 1.21
TGFBR1-202ENST00000374994 PHF2O75151 1096 aa22.59■■□□□ 1.21
TGFBR1-202ENST00000374994 TDP2O95551 362 aa22.59■■□□□ 1.21
TGFBR1-202ENST00000374994 EYA4O95677 639 aa22.59■■□□□ 1.21
TGFBR1-202ENST00000374994 KRT7P08729 469 aa22.59■■□□□ 1.21
TGFBR1-202ENST00000374994 CD58P19256 250 aa22.59■■□□□ 1.21
TGFBR1-202ENST00000374994 KRT76Q01546 638 aa22.59■■□□□ 1.21
TGFBR1-202ENST00000374994 THOC5Q13769 683 aaKnown RBP22.59■■□□□ 1.21
TGFBR1-202ENST00000374994 AGGF1Q8N302 714 aaeCLIP22.59■■□□□ 1.21
TGFBR1-202ENST00000374994 FAM129AQ9BZQ8 928 aa22.59■■□□□ 1.21
TGFBR1-202ENST00000374994 TRIM15Q9C019 465 aa22.59■■□□□ 1.21
TGFBR1-202ENST00000374994 KPNA7A9QM74 516 aa22.59■■□□□ 1.21
TGFBR1-202ENST00000374994 TRIML2Q8N7C3 387 aa22.59■■□□□ 1.21
TGFBR1-202ENST00000374994 ARMC2Q8NEN0 867 aa22.59■■□□□ 1.21
TGFBR1-202ENST00000374994 ATL2Q8NHH9 583 aa22.59■■□□□ 1.21
TGFBR1-202ENST00000374994 ROPN1BQ9BZX4 212 aaPredicted RBP22.59■■□□□ 1.21
TGFBR1-202ENST00000374994 ROPN1Q9HAT0 212 aaPredicted RBP22.59■■□□□ 1.21
TGFBR1-202ENST00000374994 ASNSD1Q9NWL6 643 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms