RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 SKA2Q8WVK7 121 aaPredicted RBP13.15□□□□□ -0.3
NPLOC4-202ENST00000374747 FBXO40Q9UH90 709 aa13.15□□□□□ -0.3
NPLOC4-202ENST00000374747 TLR3O15455 904 aaKnown RBP13.15□□□□□ -0.3
NPLOC4-202ENST00000374747 FDX1P10109 184 aa13.15□□□□□ -0.3
NPLOC4-202ENST00000374747 CACNB1Q02641 598 aaPredicted RBP13.15□□□□□ -0.3
NPLOC4-202ENST00000374747 NAA30Q147X3 362 aaPredicted RBP13.15□□□□□ -0.3
NPLOC4-202ENST00000374747 SPOPLQ6IQ16 392 aa13.15□□□□□ -0.3
NPLOC4-202ENST00000374747 ALKBH5Q6P6C2 394 aaKnown RBP13.15□□□□□ -0.3
NPLOC4-202ENST00000374747 BBS5Q8N3I7 341 aa13.15□□□□□ -0.3
NPLOC4-202ENST00000374747 CCNYQ8ND76 341 aa13.15□□□□□ -0.3
NPLOC4-202ENST00000374747 FGD4Q96M96 766 aa13.15□□□□□ -0.3
NPLOC4-202ENST00000374747 CYTH2Q99418 400 aa13.15□□□□□ -0.3
NPLOC4-202ENST00000374747 CPVLQ9H3G5 476 aa13.15□□□□□ -0.3
NPLOC4-202ENST00000374747 ANO9A1A5B4 782 aa13.15□□□□□ -0.3
NPLOC4-202ENST00000374747 ANKRD65E5RJM6 399 aa13.15□□□□□ -0.3
NPLOC4-202ENST00000374747 FGGP02679 453 aa13.15□□□□□ -0.3
NPLOC4-202ENST00000374747 RHOT2Q8IXI1 618 aa13.15□□□□□ -0.3
NPLOC4-202ENST00000374747 OXER1Q8TDS5 423 aa13.15□□□□□ -0.3
NPLOC4-202ENST00000374747 PYROXD1Q8WU10 500 aa13.15□□□□□ -0.3
NPLOC4-202ENST00000374747 ANKRD36BP1Q96IX9 119 aa13.15□□□□□ -0.3
NPLOC4-202ENST00000374747 TRIM55Q9BYV6 548 aa13.15□□□□□ -0.3
NPLOC4-202ENST00000374747 RWDD2BP57060 319 aa13.15□□□□□ -0.3
NPLOC4-202ENST00000374747 SNAP25P60880 206 aa13.15□□□□□ -0.3
NPLOC4-202ENST00000374747 C4orf50Q6ZRC1 276 aa13.15□□□□□ -0.3
NPLOC4-202ENST00000374747 ZNF710Q8N1W2 664 aa13.15□□□□□ -0.3
NPLOC4-202ENST00000374747 TMEM60Q9H2L4 133 aa13.15□□□□□ -0.3
NPLOC4-202ENST00000374747 EPB41L4AQ9HCS5 686 aaPredicted RBP13.15□□□□□ -0.3
NPLOC4-202ENST00000374747 ZHX2Q9Y6X8 837 aa13.15□□□□□ -0.3
NPLOC4-202ENST00000374747 ABL1P00519 1130 aa13.14□□□□□ -0.31
NPLOC4-202ENST00000374747 ARL4AP40617 200 aa13.14□□□□□ -0.31
NPLOC4-202ENST00000374747 IFRD2Q12894 506 aaPredicted RBP13.14□□□□□ -0.31
NPLOC4-202ENST00000374747 ARID5BQ14865 1188 aa13.14□□□□□ -0.31
NPLOC4-202ENST00000374747 TOGARAM2Q6ZUX3 1019 aa13.14□□□□□ -0.31
NPLOC4-202ENST00000374747 CALN1Q9BXU9 219 aa13.14□□□□□ -0.31
NPLOC4-202ENST00000374747 STOML1Q9UBI4 398 aa13.14□□□□□ -0.31
NPLOC4-202ENST00000374747 GYG2O15488 501 aa13.14□□□□□ -0.31
NPLOC4-202ENST00000374747 EIF2AK2P19525 551 aaKnown RBP13.14□□□□□ -0.31
NPLOC4-202ENST00000374747 MYLK4Q86YV6 388 aaPredicted RBP13.14□□□□□ -0.31
NPLOC4-202ENST00000374747 CRLF3Q8IUI8 442 aa13.14□□□□□ -0.31
NPLOC4-202ENST00000374747 PSAPP07602 524 aa13.14□□□□□ -0.31
NPLOC4-202ENST00000374747 GGCXP38435 758 aa13.14□□□□□ -0.31
NPLOC4-202ENST00000374747 MXI1P50539 228 aa13.14□□□□□ -0.31
NPLOC4-202ENST00000374747 THOC5Q13769 683 aaKnown RBP13.14□□□□□ -0.31
NPLOC4-202ENST00000374747 PPP4R3CPQ6ZMV5 832 aa13.14□□□□□ -0.31
NPLOC4-202ENST00000374747 ADGRF4Q8IZF3 695 aa13.14□□□□□ -0.31
NPLOC4-202ENST00000374747 KCTD6Q8NC69 237 aa13.14□□□□□ -0.31
NPLOC4-202ENST00000374747 CEP170P1Q96L14 293 aa13.14□□□□□ -0.31
NPLOC4-202ENST00000374747 ZMAT2Q96NC0 199 aaKnown RBP13.14□□□□□ -0.31
NPLOC4-202ENST00000374747 SPON1Q9HCB6 807 aa13.14□□□□□ -0.31
NPLOC4-202ENST00000374747 MTMR4Q9NYA4 1195 aa13.14□□□□□ -0.31
NPLOC4-202ENST00000374747 FIS1Q9Y3D6 152 aa13.14□□□□□ -0.31
NPLOC4-202ENST00000374747 CREB3O43889 395 aa13.14□□□□□ -0.31
NPLOC4-202ENST00000374747 QRICH1Q2TAL8 776 aa13.14□□□□□ -0.31
NPLOC4-202ENST00000374747 DEPDC1BQ8WUY9 529 aa13.14□□□□□ -0.31
NPLOC4-202ENST00000374747 CFAP36Q96G28 342 aa13.14□□□□□ -0.31
NPLOC4-202ENST00000374747 FAM20AQ96MK3 541 aa13.14□□□□□ -0.31
NPLOC4-202ENST00000374747 KMT5AQ9NQR1 393 aa13.14□□□□□ -0.31
NPLOC4-202ENST00000374747 ADAMTS1Q9UHI8 967 aa13.14□□□□□ -0.31
NPLOC4-202ENST00000374747 GPR75-ASB3A0A0A6YYF3 556 aa13.14□□□□□ -0.31
NPLOC4-202ENST00000374747 MED7O43513 233 aa13.14□□□□□ -0.31
NPLOC4-202ENST00000374747 CASP7P55210 303 aa13.14□□□□□ -0.31
NPLOC4-202ENST00000374747 C16orf86Q6ZW13 317 aa13.14□□□□□ -0.31
NPLOC4-202ENST00000374747 NUDCD1Q96RS6 583 aa13.14□□□□□ -0.31
NPLOC4-202ENST00000374747 TRIM15Q9C019 465 aa13.14□□□□□ -0.31
NPLOC4-202ENST00000374747 PARVGQ9HBI0 331 aa13.14□□□□□ -0.31
NPLOC4-202ENST00000374747 GINM1Q9NU53 330 aa13.14□□□□□ -0.31
NPLOC4-202ENST00000374747 PALM3A6NDB9 673 aaPredicted RBP13.13□□□□□ -0.31
NPLOC4-202ENST00000374747 ZBBXA8MT70 800 aa13.13□□□□□ -0.31
NPLOC4-202ENST00000374747 MEIS1O00470 390 aa13.13□□□□□ -0.31
NPLOC4-202ENST00000374747 PPP4CP60510 307 aa13.13□□□□□ -0.31
NPLOC4-202ENST00000374747 CDC42EP5Q6NZY7 148 aa13.13□□□□□ -0.31
NPLOC4-202ENST00000374747 SESTD1Q86VW0 696 aa13.13□□□□□ -0.31
NPLOC4-202ENST00000374747 PRPF38AQ8NAV1 312 aaKnown RBP13.13□□□□□ -0.31
NPLOC4-202ENST00000374747 CEP70Q8NHQ1 597 aa13.13□□□□□ -0.31
NPLOC4-202ENST00000374747 FAM149B1Q96BN6 582 aa13.13□□□□□ -0.31
NPLOC4-202ENST00000374747 RNF181Q9P0P0 153 aa13.13□□□□□ -0.31
NPLOC4-202ENST00000374747 A0A0G2JND7 137 aa13.13□□□□□ -0.31
NPLOC4-202ENST00000374747 XPOTO43592 962 aaKnown RBP13.13□□□□□ -0.31
NPLOC4-202ENST00000374747 FGFR2P21802 821 aa13.13□□□□□ -0.31
NPLOC4-202ENST00000374747 HDLBPQ00341 1268 aaKnown RBP13.13□□□□□ -0.31
NPLOC4-202ENST00000374747 MDM2Q00987 491 aaPredicted RBP13.13□□□□□ -0.31
NPLOC4-202ENST00000374747 TRMT10CQ7L0Y3 403 aaKnown RBP13.13□□□□□ -0.31
NPLOC4-202ENST00000374747 WDR75Q8IWA0 830 aaKnown RBP13.13□□□□□ -0.31
NPLOC4-202ENST00000374747 SRRM1Q8IYB3 904 aaKnown RBP13.13□□□□□ -0.31
NPLOC4-202ENST00000374747 RNF169Q8NCN4 708 aa13.13□□□□□ -0.31
NPLOC4-202ENST00000374747 SLC38A10Q9HBR0 1119 aa13.13□□□□□ -0.31
NPLOC4-202ENST00000374747 G3BP2Q9UN86 482 aaKnown RBP13.13□□□□□ -0.31
NPLOC4-202ENST00000374747 RGPD2P0DJD1 1756 aa13.13□□□□□ -0.31
NPLOC4-202ENST00000374747 H0Y3Z8 333 aa13.13□□□□□ -0.31
NPLOC4-202ENST00000374747 KRT37O76014 449 aa13.13□□□□□ -0.31
NPLOC4-202ENST00000374747 KRT10P13645 584 aa13.13□□□□□ -0.31
NPLOC4-202ENST00000374747 ALCAMQ13740 583 aa13.13□□□□□ -0.31
NPLOC4-202ENST00000374747 PCIF1Q9H4Z3 704 aa13.13□□□□□ -0.31
NPLOC4-202ENST00000374747 LRRC37A3O60309 1634 aa13.13□□□□□ -0.31
NPLOC4-202ENST00000374747 NVLO15381 856 aaKnown RBP13.13□□□□□ -0.31
NPLOC4-202ENST00000374747 HP1BP3Q5SSJ5 553 aaPredicted RBP13.13□□□□□ -0.31
NPLOC4-202ENST00000374747 SRBD1Q8N5C6 995 aaKnown RBP13.13□□□□□ -0.31
NPLOC4-202ENST00000374747 ABHD10Q9NUJ1 306 aa13.13□□□□□ -0.31
NPLOC4-202ENST00000374747 USP17L15C9J2P7 530 aa13.12□□□□□ -0.31
NPLOC4-202ENST00000374747 USP17L13C9JLJ4 530 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms