RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 ZNF668Q96K58 619 aaPredicted RBP16.63■□□□□ 0.25
HSPG2-201ENST00000374673 NLRP4Q96MN2 994 aa16.63■□□□□ 0.25
HSPG2-201ENST00000374673 SCLT1Q96NL6 688 aa16.63■□□□□ 0.25
HSPG2-201ENST00000374673 REEP2Q9BRK0 252 aa16.63■□□□□ 0.25
HSPG2-201ENST00000374673 NFKBIZQ9BYH8 718 aa16.63■□□□□ 0.25
HSPG2-201ENST00000374673 GCOM2Q9BZD3 368 aaPredicted RBP16.63■□□□□ 0.25
HSPG2-201ENST00000374673 LRRC27Q9C0I9 530 aa16.63■□□□□ 0.25
HSPG2-201ENST00000374673 C17orf75Q9HAS0 396 aa16.63■□□□□ 0.25
HSPG2-201ENST00000374673 IFT122Q9HBG6 1241 aa16.63■□□□□ 0.25
HSPG2-201ENST00000374673 SERTAD1Q9UHV2 236 aa16.63■□□□□ 0.25
HSPG2-201ENST00000374673 TNRC18O15417 2968 aaPredicted RBP16.63■□□□□ 0.25
HSPG2-201ENST00000374673 MICAL3Q7RTP6 2002 aa16.62■□□□□ 0.25
HSPG2-201ENST00000374673 NPHP3-ACAD11A0A0J9YXS1 232 aa16.62■□□□□ 0.25
HSPG2-201ENST00000374673 MYMKA6NI61 221 aa16.62■□□□□ 0.25
HSPG2-201ENST00000374673 KRT18P05783 430 aaKnown RBP16.62■□□□□ 0.25
HSPG2-201ENST00000374673 SLFN14P0C7P3 912 aa16.62■□□□□ 0.25
HSPG2-201ENST00000374673 DARSP14868 501 aaKnown RBP16.62■□□□□ 0.25
HSPG2-201ENST00000374673 EIF4BP23588 611 aaKnown RBP16.62■□□□□ 0.25
HSPG2-201ENST00000374673 NAMPTP43490 491 aa16.62■□□□□ 0.25
HSPG2-201ENST00000374673 AMPD3Q01432 767 aa16.62■□□□□ 0.25
HSPG2-201ENST00000374673 RAD51AP2Q09MP3 1159 aa16.62■□□□□ 0.25
HSPG2-201ENST00000374673 TPRNQ4KMQ1 711 aa16.62■□□□□ 0.25
HSPG2-201ENST00000374673 PLEKHG4Q58EX7 1191 aa16.62■□□□□ 0.25
HSPG2-201ENST00000374673 SRGAP1Q7Z6B7 1085 aa16.62■□□□□ 0.25
HSPG2-201ENST00000374673 CEP57L1Q8IYX8 460 aa16.62■□□□□ 0.25
HSPG2-201ENST00000374673 DDX12PQ92771 950 aa16.62■□□□□ 0.25
HSPG2-201ENST00000374673 APBB2Q92870 758 aa16.62■□□□□ 0.25
HSPG2-201ENST00000374673 IFT74Q96LB3 600 aa16.62■□□□□ 0.25
HSPG2-201ENST00000374673 INO80BQ9C086 356 aaPredicted RBP16.62■□□□□ 0.25
HSPG2-201ENST00000374673 AGO3Q9H9G7 860 aaKnown RBP16.62■□□□□ 0.25
HSPG2-201ENST00000374673 POLD4Q9HCU8 107 aa16.62■□□□□ 0.25
HSPG2-201ENST00000374673 GADD45BO75293 160 aaPredicted RBP16.61■□□□□ 0.25
HSPG2-201ENST00000374673 RPS6KA5O75582 802 aa16.61■□□□□ 0.25
HSPG2-201ENST00000374673 ZNF202O95125 648 aa16.61■□□□□ 0.25
HSPG2-201ENST00000374673 SRGAP2CP0DJJ0 459 aa16.61■□□□□ 0.25
HSPG2-201ENST00000374673 BMP8BP34820 402 aa16.61■□□□□ 0.25
HSPG2-201ENST00000374673 PHKA2P46019 1235 aa16.61■□□□□ 0.25
HSPG2-201ENST00000374673 ZNF131P52739 623 aa16.61■□□□□ 0.25
HSPG2-201ENST00000374673 EPHB4P54760 987 aa16.61■□□□□ 0.25
HSPG2-201ENST00000374673 PTENP60484 403 aa16.61■□□□□ 0.25
HSPG2-201ENST00000374673 UBE2HP62256 183 aa16.61■□□□□ 0.25
HSPG2-201ENST00000374673 CACNB1Q02641 598 aaPredicted RBP16.61■□□□□ 0.25
HSPG2-201ENST00000374673 LONRF3Q496Y0 759 aa16.61■□□□□ 0.25
HSPG2-201ENST00000374673 ODR4Q5SWX8 454 aa16.61■□□□□ 0.25
HSPG2-201ENST00000374673 CDCA2Q69YH5 1023 aaPredicted RBP16.61■□□□□ 0.25
HSPG2-201ENST00000374673 CNNM4Q6P4Q7 775 aa16.61■□□□□ 0.25
HSPG2-201ENST00000374673 CNKSR3Q6P9H4 555 aa16.61■□□□□ 0.25
HSPG2-201ENST00000374673 PSRC1Q6PGN9 363 aaPredicted RBP16.61■□□□□ 0.25
HSPG2-201ENST00000374673 FAM43BQ6ZT52 329 aaPredicted RBP16.61■□□□□ 0.25
HSPG2-201ENST00000374673 C16orf59Q7L2K0 433 aa16.61■□□□□ 0.25
HSPG2-201ENST00000374673 DYMQ7RTS9 669 aa16.61■□□□□ 0.25
HSPG2-201ENST00000374673 FMR1NBQ8N0W7 255 aaPredicted RBP16.61■□□□□ 0.25
HSPG2-201ENST00000374673 ENGASEQ8NFI3 743 aa16.61■□□□□ 0.25
HSPG2-201ENST00000374673 DNAJC19Q96DA6 116 aa16.61■□□□□ 0.25
HSPG2-201ENST00000374673 IFIH1Q9BYX4 1025 aaKnown RBP16.61■□□□□ 0.25
HSPG2-201ENST00000374673 KCNG1Q9UIX4 513 aa16.61■□□□□ 0.25
HSPG2-201ENST00000374673 NOC2LQ9Y3T9 749 aaKnown RBP16.61■□□□□ 0.25
HSPG2-201ENST00000374673 LRRIQ4A6NIV6 560 aa16.6■□□□□ 0.25
HSPG2-201ENST00000374673 GPR182O15218 404 aa16.6■□□□□ 0.25
HSPG2-201ENST00000374673 PRPF40AO75400 957 aaKnown RBP16.6■□□□□ 0.25
HSPG2-201ENST00000374673 FAM13AO94988 1023 aa16.6■□□□□ 0.25
HSPG2-201ENST00000374673 ACRP10323 421 aa16.6■□□□□ 0.25
HSPG2-201ENST00000374673 PLS3P13797 630 aa16.6■□□□□ 0.25
HSPG2-201ENST00000374673 CD52P31358 61 aa16.6■□□□□ 0.25
HSPG2-201ENST00000374673 PEX3P56589 373 aa16.6■□□□□ 0.25
HSPG2-201ENST00000374673 FAM160A1Q05DH4 1040 aa16.6■□□□□ 0.25
HSPG2-201ENST00000374673 PAK2Q13177 524 aa16.6■□□□□ 0.25
HSPG2-201ENST00000374673 DMP1Q13316 513 aaPredicted RBP16.6■□□□□ 0.25
HSPG2-201ENST00000374673 SNW1Q13573 536 aaKnown RBP16.6■□□□□ 0.25
HSPG2-201ENST00000374673 KRBA2Q6ZNG9 492 aa16.6■□□□□ 0.25
HSPG2-201ENST00000374673 FAM228AQ86W67 206 aa16.6■□□□□ 0.25
HSPG2-201ENST00000374673 DBF4BQ8NFT6 615 aa16.6■□□□□ 0.25
HSPG2-201ENST00000374673 SEPT8Q92599 483 aa16.6■□□□□ 0.25
HSPG2-201ENST00000374673 STAMQ92783 540 aa16.6■□□□□ 0.25
HSPG2-201ENST00000374673 C7orf25Q9BPX7 421 aa16.6■□□□□ 0.25
HSPG2-201ENST00000374673 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.6■□□□□ 0.25
HSPG2-201ENST00000374673 TRIM9Q9C026 710 aa16.6■□□□□ 0.25
HSPG2-201ENST00000374673 C2orf40Q9H1Z8 148 aa16.6■□□□□ 0.25
HSPG2-201ENST00000374673 ERVK-5Q9HDB9 667 aa16.6■□□□□ 0.25
HSPG2-201ENST00000374673 LARSQ9P2J5 1176 aaKnown RBP16.6■□□□□ 0.25
HSPG2-201ENST00000374673 PADI3Q9ULW8 664 aa16.6■□□□□ 0.25
HSPG2-201ENST00000374673 FRMD3A2A2Y4 597 aa16.59■□□□□ 0.25
HSPG2-201ENST00000374673 SFI1A8K8P3 1242 aa16.59■□□□□ 0.25
HSPG2-201ENST00000374673 TBCAO75347 108 aaKnown RBP16.59■□□□□ 0.25
HSPG2-201ENST00000374673 FGBP02675 491 aa16.59■□□□□ 0.25
HSPG2-201ENST00000374673 SFPQP23246 707 aaKnown RBP eCLIP16.59■□□□□ 0.25
HSPG2-201ENST00000374673 NPTX2P47972 431 aa16.59■□□□□ 0.25
HSPG2-201ENST00000374673 PCBP1Q15365 356 aaKnown RBP eCLIP16.59■□□□□ 0.25
HSPG2-201ENST00000374673 TMEM240Q5SV17 173 aa16.59■□□□□ 0.25
HSPG2-201ENST00000374673 ZNF365Q70YC5 407 aa16.59■□□□□ 0.25
HSPG2-201ENST00000374673 ZBTB8OSQ8IWT0 167 aa16.59■□□□□ 0.25
HSPG2-201ENST00000374673 CNNM3Q8NE01 707 aa16.59■□□□□ 0.25
HSPG2-201ENST00000374673 DEPTORQ8TB45 409 aa16.59■□□□□ 0.25
HSPG2-201ENST00000374673 SPIRE2Q8WWL2 714 aa16.59■□□□□ 0.25
HSPG2-201ENST00000374673 PAGE5Q96GU1 130 aa16.59■□□□□ 0.25
HSPG2-201ENST00000374673 NTPCRQ9BSD7 190 aaKnown RBP16.59■□□□□ 0.25
HSPG2-201ENST00000374673 MINDY3Q9H8M7 445 aa16.59■□□□□ 0.25
HSPG2-201ENST00000374673 PARVGQ9HBI0 331 aa16.59■□□□□ 0.25
HSPG2-201ENST00000374673 ST3GAL5Q9UNP4 418 aa16.59■□□□□ 0.25
HSPG2-201ENST00000374673 ADGRA3Q8IWK6 1321 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms